data_7S1S
#
_model_server_result.job_id            X4D3pRKdBAMLq8jl9kp-cw 
_model_server_result.datetime_utc      '2024-10-20 19:19:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7s1s 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":701}' 
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_entry.id    7S1S 
#
_exptl.entry_id    7S1S 
_exptl.method      'X-RAY DIFFRACTION' 
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_entity.details                     ? 
_entity.formula_weight              297.334 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "5'-DEOXY-5'-METHYLTHIOADENOSINE" 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7S1S 
_cell.length_a            103.14 
_cell.length_b            138.095 
_cell.length_c            178.8 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
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_symmetry.entry_id                 7S1S 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        23 
_symmetry.space_group_name_Hall    'I 2 2' 
_symmetry.space_group_name_H-M     'I 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C11 H15 N5 O3 S' 
_chem_comp.formula_weight    297.334 
_chem_comp.id                MTA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "5'-DEOXY-5'-METHYLTHIOADENOSINE" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CS S5' MTA sing 293 n n 
CS HCS1 MTA sing 294 n n 
CS HCS2 MTA sing 295 n n 
CS HCS3 MTA sing 296 n n 
S5' C5' MTA sing 297 n n 
C5' C4' MTA sing 298 n n 
C5' "H5'1" MTA sing 299 n n 
C5' "H5'2" MTA sing 300 n n 
C4' O4' MTA sing 301 n n 
C4' C3' MTA sing 302 n n 
C4' H4' MTA sing 303 n n 
O4' C1' MTA sing 304 n n 
C2' O2' MTA sing 305 n n 
C2' C3' MTA sing 306 n n 
C2' C1' MTA sing 307 n n 
C2' H2' MTA sing 308 n n 
O2' HO2' MTA sing 309 n n 
C3' O3' MTA sing 310 n n 
C3' H3' MTA sing 311 n n 
O3' H3T MTA sing 312 n n 
C1' N9 MTA sing 313 n n 
C1' H1' MTA sing 314 n n 
N9 C8 MTA sing 315 n y 
N9 C4 MTA sing 316 n y 
C8 N7 MTA doub 317 n y 
C8 H8 MTA sing 318 n n 
N7 C5 MTA sing 319 n y 
C5 C6 MTA sing 320 n y 
C5 C4 MTA doub 321 n y 
C6 N6 MTA sing 322 n n 
C6 N1 MTA doub 323 n y 
N6 H61 MTA sing 324 n n 
N6 H62 MTA sing 325 n n 
N1 C2 MTA sing 326 n y 
C2 N3 MTA doub 327 n y 
C2 H2 MTA sing 328 n n 
N3 C4 MTA sing 329 n y 
#
_atom_sites.entry_id                     7S1S 
_atom_sites.fract_transf_matrix[1][1]    0.009696 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.007241 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005593 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 MTA A 1 701 700 MTA MTA . 
D 4 85K A 1 702 801 85K LIG . 
E 5 HOH A 1 801 41 HOH HOH . 
E 5 HOH A 2 802 73 HOH HOH . 
E 5 HOH A 3 803 14 HOH HOH . 
E 5 HOH A 4 804 70 HOH HOH . 
E 5 HOH A 5 805 1 HOH HOH . 
E 5 HOH A 6 806 62 HOH HOH . 
E 5 HOH A 7 807 5 HOH HOH . 
E 5 HOH A 8 808 21 HOH HOH . 
E 5 HOH A 9 809 22 HOH HOH . 
E 5 HOH A 10 810 50 HOH HOH . 
E 5 HOH A 11 811 58 HOH HOH . 
E 5 HOH A 12 812 78 HOH HOH . 
E 5 HOH A 13 813 7 HOH HOH . 
E 5 HOH A 14 814 18 HOH HOH . 
E 5 HOH A 15 815 13 HOH HOH . 
E 5 HOH A 16 816 16 HOH HOH . 
E 5 HOH A 17 817 24 HOH HOH . 
E 5 HOH A 18 818 17 HOH HOH . 
E 5 HOH A 19 819 60 HOH HOH . 
E 5 HOH A 20 820 61 HOH HOH . 
E 5 HOH A 21 821 29 HOH HOH . 
E 5 HOH A 22 822 15 HOH HOH . 
E 5 HOH A 23 823 37 HOH HOH . 
E 5 HOH A 24 824 43 HOH HOH . 
E 5 HOH A 25 825 23 HOH HOH . 
E 5 HOH A 26 826 47 HOH HOH . 
E 5 HOH A 27 827 11 HOH HOH . 
E 5 HOH A 28 828 20 HOH HOH . 
E 5 HOH A 29 829 8 HOH HOH . 
E 5 HOH A 30 830 34 HOH HOH . 
E 5 HOH A 31 831 9 HOH HOH . 
E 5 HOH A 32 832 44 HOH HOH . 
E 5 HOH A 33 833 71 HOH HOH . 
E 5 HOH A 34 834 57 HOH HOH . 
E 5 HOH A 35 835 42 HOH HOH . 
E 5 HOH A 36 836 80 HOH HOH . 
E 5 HOH A 37 837 30 HOH HOH . 
E 5 HOH A 38 838 39 HOH HOH . 
E 5 HOH A 39 839 74 HOH HOH . 
E 5 HOH A 40 840 68 HOH HOH . 
E 5 HOH A 41 841 36 HOH HOH . 
E 5 HOH A 42 842 53 HOH HOH . 
E 5 HOH A 43 843 25 HOH HOH . 
E 5 HOH A 44 844 27 HOH HOH . 
E 5 HOH A 45 845 3 HOH HOH . 
E 5 HOH A 46 846 75 HOH HOH . 
E 5 HOH A 47 847 19 HOH HOH . 
E 5 HOH A 48 848 48 HOH HOH . 
E 5 HOH A 49 849 46 HOH HOH . 
E 5 HOH A 50 850 32 HOH HOH . 
E 5 HOH A 51 851 10 HOH HOH . 
E 5 HOH A 52 852 81 HOH HOH . 
E 5 HOH A 53 853 67 HOH HOH . 
E 5 HOH A 54 854 77 HOH HOH . 
E 5 HOH A 55 855 63 HOH HOH . 
E 5 HOH A 56 856 45 HOH HOH . 
E 5 HOH A 57 857 76 HOH HOH . 
E 5 HOH A 58 858 33 HOH HOH . 
E 5 HOH A 59 859 79 HOH HOH . 
F 5 HOH B 1 401 2 HOH HOH . 
F 5 HOH B 2 402 6 HOH HOH . 
F 5 HOH B 3 403 69 HOH HOH . 
F 5 HOH B 4 404 28 HOH HOH . 
F 5 HOH B 5 405 52 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CS MTA . . . C 3 -30.216 -39.386 -7.052 1 40.25 ? CS MTA 701 A 1 
HETATM 2 S S5' MTA . . . C 3 -31.731 -40.347 -6.769 1 41.34 ? S5' MTA 701 A 1 
HETATM 3 C C5' MTA . . . C 3 -33.097 -39.226 -6.354 1 41.71 ? C5' MTA 701 A 1 
HETATM 4 C C4' MTA . . . C 3 -32.69 -38.328 -5.162 1 42.35 ? C4' MTA 701 A 1 
HETATM 5 O O4' MTA . . . C 3 -33.634 -37.269 -5.006 1 42.44 ? O4' MTA 701 A 1 
HETATM 6 C C2' MTA . . . C 3 -34.223 -38.621 -3.337 1 42.17 ? C2' MTA 701 A 1 
HETATM 7 O O2' MTA . . . C 3 -34.306 -38.693 -1.85 1 40.05 ? O2' MTA 701 A 1 
HETATM 8 C C3' MTA . . . C 3 -32.807 -39.111 -3.827 1 42.44 ? C3' MTA 701 A 1 
HETATM 9 O O3' MTA . . . C 3 -31.86 -38.73 -2.981 1 42.34 ? O3' MTA 701 A 1 
HETATM 10 C C1' MTA . . . C 3 -34.296 -37.4 -3.739 1 41.96 ? C1' MTA 701 A 1 
HETATM 11 N N9 MTA . . . C 3 -35.668 -37.003 -3.894 1 41.33 ? N9 MTA 701 A 1 
HETATM 12 C C8 MTA . . . C 3 -36.65 -37.686 -4.561 1 40.58 ? C8 MTA 701 A 1 
HETATM 13 N N7 MTA . . . C 3 -37.758 -37.015 -4.489 1 40.82 ? N7 MTA 701 A 1 
HETATM 14 C C5 MTA . . . C 3 -37.58 -35.922 -3.818 1 41.75 ? C5 MTA 701 A 1 
HETATM 15 C C6 MTA . . . C 3 -38.43 -34.883 -3.466 1 43.76 ? C6 MTA 701 A 1 
HETATM 16 N N6 MTA . . . C 3 -39.793 -34.904 -3.861 1 44.64 ? N6 MTA 701 A 1 
HETATM 17 N N1 MTA . . . C 3 -37.955 -33.858 -2.747 1 44.82 ? N1 MTA 701 A 1 
HETATM 18 C C2 MTA . . . C 3 -36.667 -33.829 -2.368 1 46.35 ? C2 MTA 701 A 1 
HETATM 19 N N3 MTA . . . C 3 -35.824 -34.823 -2.697 1 45.24 ? N3 MTA 701 A 1 
HETATM 20 C C4 MTA . . . C 3 -36.259 -35.866 -3.415 1 41.83 ? C4 MTA 701 A 1 
#
_model_server_stats.io_time_ms              170 
_model_server_stats.parse_time_ms           35 
_model_server_stats.create_model_time_ms    19 
_model_server_stats.query_time_ms           272 
_model_server_stats.encode_time_ms          23 
_model_server_stats.element_count           20 
#