data_7S2D # _model_server_result.job_id ci_mn1IpxboBgC59AAgnwg _model_server_result.datetime_utc '2024-11-25 14:50:45' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s2d # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":201}' # _entry.id 7S2D # _exptl.entry_id 7S2D _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S2D _cell.length_a 78.363 _cell.length_b 78.363 _cell.length_c 36.957 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S2D _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 6 A CYS 6 1_555 A SG CYS 127 A CYS 127 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 A SG CYS 30 A CYS 30 1_555 A SG CYS 115 A CYS 115 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.055 ? disulf ? disulf3 A SG CYS 64 A CYS 64 1_555 A SG CYS 80 A CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf4 A SG CYS 76 A CYS 76 1_555 A SG CYS 94 A CYS 94 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? metalc ? metalc1 A O SER 60 A SER 60 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc2 A O CYS 64 A CYS 64 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.466 ? metalc ? metalc3 A OG SER 72 A SER 72 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.563 ? metalc ? metalc4 A O ARG 73 A ARG 73 1_555 B NA NA . A NA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.425 ? metalc ? metalc5 B NA NA . A NA 201 1_555 C O HOH . A HOH 389 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7S2D _atom_sites.fract_transf_matrix[1][1] 0.012761 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012761 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.027058 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA A 1 201 201 NA NA . C 3 HOH A 1 301 94 HOH HOH . C 3 HOH A 2 302 18 HOH HOH . C 3 HOH A 3 303 8 HOH HOH . C 3 HOH A 4 304 57 HOH HOH . C 3 HOH A 5 305 157 HOH HOH . C 3 HOH A 6 306 58 HOH HOH . C 3 HOH A 7 307 72 HOH HOH . C 3 HOH A 8 308 130 HOH HOH . C 3 HOH A 9 309 16 HOH HOH . C 3 HOH A 10 310 99 HOH HOH . C 3 HOH A 11 311 59 HOH HOH . C 3 HOH A 12 312 15 HOH HOH . C 3 HOH A 13 313 102 HOH HOH . C 3 HOH A 14 314 56 HOH HOH . C 3 HOH A 15 315 66 HOH HOH . C 3 HOH A 16 316 77 HOH HOH . C 3 HOH A 17 317 141 HOH HOH . C 3 HOH A 18 318 100 HOH HOH . C 3 HOH A 19 319 62 HOH HOH . C 3 HOH A 20 320 42 HOH HOH . C 3 HOH A 21 321 27 HOH HOH . C 3 HOH A 22 322 48 HOH HOH . C 3 HOH A 23 323 117 HOH HOH . C 3 HOH A 24 324 133 HOH HOH . C 3 HOH A 25 325 101 HOH HOH . C 3 HOH A 26 326 65 HOH HOH . C 3 HOH A 27 327 28 HOH HOH . C 3 HOH A 28 328 30 HOH HOH . C 3 HOH A 29 329 34 HOH HOH . C 3 HOH A 30 330 57 HOH HOH . C 3 HOH A 31 331 5 HOH HOH . C 3 HOH A 32 332 8 HOH HOH . C 3 HOH A 33 333 139 HOH HOH . C 3 HOH A 34 334 103 HOH HOH . C 3 HOH A 35 335 16 HOH HOH . C 3 HOH A 36 336 106 HOH HOH . C 3 HOH A 37 337 19 HOH HOH . C 3 HOH A 38 338 37 HOH HOH . C 3 HOH A 39 339 82 HOH HOH . C 3 HOH A 40 340 32 HOH HOH . C 3 HOH A 41 341 68 HOH HOH . C 3 HOH A 42 342 47 HOH HOH . C 3 HOH A 43 343 71 HOH HOH . C 3 HOH A 44 344 118 HOH HOH . C 3 HOH A 45 345 96 HOH HOH . C 3 HOH A 46 346 61 HOH HOH . C 3 HOH A 47 347 83 HOH HOH . C 3 HOH A 48 348 63 HOH HOH . C 3 HOH A 49 349 13 HOH HOH . C 3 HOH A 50 350 18 HOH HOH . C 3 HOH A 51 351 108 HOH HOH . C 3 HOH A 52 352 17 HOH HOH . C 3 HOH A 53 353 114 HOH HOH . C 3 HOH A 54 354 30 HOH HOH . C 3 HOH A 55 355 123 HOH HOH . C 3 HOH A 56 356 37 HOH HOH . C 3 HOH A 57 357 49 HOH HOH . C 3 HOH A 58 358 27 HOH HOH . C 3 HOH A 59 359 23 HOH HOH . C 3 HOH A 60 360 7 HOH HOH . C 3 HOH A 61 361 11 HOH HOH . C 3 HOH A 62 362 50 HOH HOH . C 3 HOH A 63 363 97 HOH HOH . C 3 HOH A 64 364 45 HOH HOH . C 3 HOH A 65 365 4 HOH HOH . C 3 HOH A 66 366 22 HOH HOH . C 3 HOH A 67 367 41 HOH HOH . C 3 HOH A 68 368 52 HOH HOH . C 3 HOH A 69 369 36 HOH HOH . C 3 HOH A 70 370 52 HOH HOH . C 3 HOH A 71 371 9 HOH HOH . C 3 HOH A 72 372 92 HOH HOH . C 3 HOH A 73 373 33 HOH HOH . C 3 HOH A 74 374 113 HOH HOH . C 3 HOH A 75 375 6 HOH HOH . C 3 HOH A 76 376 64 HOH HOH . C 3 HOH A 77 377 12 HOH HOH . C 3 HOH A 78 378 46 HOH HOH . C 3 HOH A 79 379 31 HOH HOH . C 3 HOH A 80 380 80 HOH HOH . C 3 HOH A 81 381 107 HOH HOH . C 3 HOH A 82 382 32 HOH HOH . C 3 HOH A 83 383 74 HOH HOH . C 3 HOH A 84 384 81 HOH HOH . C 3 HOH A 85 385 45 HOH HOH . C 3 HOH A 86 386 10 HOH HOH . C 3 HOH A 87 387 3 HOH HOH . C 3 HOH A 88 388 121 HOH HOH . C 3 HOH A 89 389 35 HOH HOH . C 3 HOH A 90 390 116 HOH HOH . C 3 HOH A 91 391 10 HOH HOH . C 3 HOH A 92 392 51 HOH HOH . C 3 HOH A 93 393 98 HOH HOH . C 3 HOH A 94 394 115 HOH HOH . C 3 HOH A 95 395 24 HOH HOH . C 3 HOH A 96 396 129 HOH HOH . C 3 HOH A 97 397 40 HOH HOH . C 3 HOH A 98 398 20 HOH HOH . C 3 HOH A 99 399 84 HOH HOH . C 3 HOH A 100 400 56 HOH HOH . C 3 HOH A 101 401 46 HOH HOH . C 3 HOH A 102 402 53 HOH HOH . C 3 HOH A 103 403 61 HOH HOH . C 3 HOH A 104 404 12 HOH HOH . C 3 HOH A 105 405 111 HOH HOH . C 3 HOH A 106 406 144 HOH HOH . C 3 HOH A 107 407 134 HOH HOH . C 3 HOH A 108 408 25 HOH HOH . C 3 HOH A 109 409 76 HOH HOH . C 3 HOH A 110 410 140 HOH HOH . C 3 HOH A 111 411 55 HOH HOH . C 3 HOH A 112 412 42 HOH HOH . C 3 HOH A 113 413 69 HOH HOH . C 3 HOH A 114 414 44 HOH HOH . C 3 HOH A 115 415 38 HOH HOH . C 3 HOH A 116 416 1 HOH HOH . C 3 HOH A 117 417 151 HOH HOH . C 3 HOH A 118 418 62 HOH HOH . C 3 HOH A 119 419 29 HOH HOH . C 3 HOH A 120 420 20 HOH HOH . C 3 HOH A 121 421 21 HOH HOH . C 3 HOH A 122 422 25 HOH HOH . C 3 HOH A 123 423 85 HOH HOH . C 3 HOH A 124 424 64 HOH HOH . C 3 HOH A 125 425 110 HOH HOH . C 3 HOH A 126 426 105 HOH HOH . C 3 HOH A 127 427 50 HOH HOH . C 3 HOH A 128 428 122 HOH HOH . C 3 HOH A 129 429 39 HOH HOH . C 3 HOH A 130 430 155 HOH HOH . C 3 HOH A 131 431 146 HOH HOH . C 3 HOH A 132 432 126 HOH HOH . C 3 HOH A 133 433 13 HOH HOH . C 3 HOH A 134 434 70 HOH HOH . C 3 HOH A 135 435 142 HOH HOH . C 3 HOH A 136 436 87 HOH HOH . C 3 HOH A 137 437 145 HOH HOH . C 3 HOH A 138 438 73 HOH HOH . C 3 HOH A 139 439 144 HOH HOH . C 3 HOH A 140 440 26 HOH HOH . C 3 HOH A 141 441 19 HOH HOH . C 3 HOH A 142 442 141 HOH HOH . C 3 HOH A 143 443 54 HOH HOH . C 3 HOH A 144 444 109 HOH HOH . C 3 HOH A 145 445 91 HOH HOH . C 3 HOH A 146 446 79 HOH HOH . C 3 HOH A 147 447 152 HOH HOH . C 3 HOH A 148 448 150 HOH HOH . C 3 HOH A 149 449 147 HOH HOH . C 3 HOH A 150 450 146 HOH HOH . C 3 HOH A 151 451 93 HOH HOH . C 3 HOH A 152 452 49 HOH HOH . C 3 HOH A 153 453 150 HOH HOH . C 3 HOH A 154 454 38 HOH HOH . C 3 HOH A 155 455 149 HOH HOH . C 3 HOH A 156 456 154 HOH HOH . C 3 HOH A 157 457 167 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id B _atom_site.label_entity_id 2 _atom_site.Cartn_x -7.683 _atom_site.Cartn_y 13.923 _atom_site.Cartn_z -3.492 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 7.59 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 201 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 1 #