data_7S2L
#
_model_server_result.job_id            7OuLsJHw8-047pe-gwOewg 
_model_server_result.datetime_utc      '2024-11-07 16:14:46' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7s2l 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":302}' 
#
_entry.id    7S2L 
#
_exptl.entry_id    7S2L 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    7 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            7S2L 
_cell.length_a            123.804 
_cell.length_b            123.804 
_cell.length_c            434.424 
_cell.Z_PDB               48 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7S2L 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        179 
_symmetry.space_group_name_Hall    'P 65 2 (x,y,z+1/12)' 
_symmetry.space_group_name_H-M     'P 65 2 2' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? dimeric 2 author_defined_assembly 1 
? dimeric 2 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,E,F,G,H,I,J,K,L,Y 1 1 
C,O,P,Q,R,S,T,U,AA 1 3 
B,M,N,Z 2 1 
D,V,W,X,BA 2 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 10_555 -y,-x,-z+1/6 0.5 -0.866025 0 -0.866025 -0.5 0 0 0 -1 0 0 72.404 
3 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/6 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -61.902 107.217409 -72.404 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 O N N 
? 2 P N N 
? 2 Q N N 
? 2 V N N 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 129 n n 
C1 C2 GOL sing 130 n n 
C1 H11 GOL sing 131 n n 
C1 H12 GOL sing 132 n n 
O1 HO1 GOL sing 133 n n 
C2 O2 GOL sing 134 n n 
C2 C3 GOL sing 135 n n 
C2 H2 GOL sing 136 n n 
O2 HO2 GOL sing 137 n n 
C3 O3 GOL sing 138 n n 
C3 H31 GOL sing 139 n n 
C3 H32 GOL sing 140 n n 
O3 HO3 GOL sing 141 n n 
#
_atom_sites.entry_id                     7S2L 
_atom_sites.fract_transf_matrix[1][1]    0.008077 
_atom_sites.fract_transf_matrix[1][2]    0.004663 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.009327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.002302 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 GOL A 1 301 301 GOL GOL . 
F 2 GOL A 1 302 401 GOL GOL . 
G 2 GOL A 1 303 501 GOL GOL . 
H 3 CL A 1 304 5 CL CL . 
I 4 SO4 A 1 305 8 SO4 SO4 . 
J 4 SO4 A 1 306 11 SO4 SO4 . 
K 4 SO4 A 1 307 12 SO4 SO4 . 
L 4 SO4 A 1 308 13 SO4 SO4 . 
M 4 SO4 B 1 301 6 SO4 SO4 . 
N 4 SO4 B 1 302 14 SO4 SO4 . 
O 2 GOL C 1 301 301 GOL GOL . 
P 2 GOL C 1 302 401 GOL GOL . 
Q 2 GOL C 1 303 601 GOL GOL . 
R 3 CL C 1 304 2 CL CL . 
S 3 CL C 1 305 3 CL CL . 
T 4 SO4 C 1 306 7 SO4 SO4 . 
U 4 SO4 C 1 307 9 SO4 SO4 . 
V 2 GOL D 1 301 1 GOL GOL . 
W 3 CL D 1 302 4 CL CL . 
X 4 SO4 D 1 303 10 SO4 SO4 . 
Y 5 HOH A 1 401 9 HOH HOH . 
Y 5 HOH A 2 402 1 HOH HOH . 
Y 5 HOH A 3 403 100 HOH HOH . 
Y 5 HOH A 4 404 102 HOH HOH . 
Y 5 HOH A 5 405 97 HOH HOH . 
Y 5 HOH A 6 406 108 HOH HOH . 
Y 5 HOH A 7 407 123 HOH HOH . 
Y 5 HOH A 8 408 112 HOH HOH . 
Y 5 HOH A 9 409 125 HOH HOH . 
Y 5 HOH A 10 410 15 HOH HOH . 
Y 5 HOH A 11 411 126 HOH HOH . 
Y 5 HOH A 12 412 11 HOH HOH . 
Y 5 HOH A 13 413 55 HOH HOH . 
Y 5 HOH A 14 414 12 HOH HOH . 
Y 5 HOH A 15 415 19 HOH HOH . 
Y 5 HOH A 16 416 18 HOH HOH . 
Y 5 HOH A 17 417 4 HOH HOH . 
Y 5 HOH A 18 418 56 HOH HOH . 
Y 5 HOH A 19 419 51 HOH HOH . 
Y 5 HOH A 20 420 53 HOH HOH . 
Y 5 HOH A 21 421 128 HOH HOH . 
Y 5 HOH A 22 422 6 HOH HOH . 
Y 5 HOH A 23 423 10 HOH HOH . 
Y 5 HOH A 24 424 130 HOH HOH . 
Y 5 HOH A 25 425 58 HOH HOH . 
Y 5 HOH A 26 426 17 HOH HOH . 
Y 5 HOH A 27 427 49 HOH HOH . 
Y 5 HOH A 28 428 129 HOH HOH . 
Y 5 HOH A 29 429 2 HOH HOH . 
Y 5 HOH A 30 430 13 HOH HOH . 
Y 5 HOH A 31 431 8 HOH HOH . 
Y 5 HOH A 32 432 87 HOH HOH . 
Y 5 HOH A 33 433 14 HOH HOH . 
Y 5 HOH A 34 434 5 HOH HOH . 
Y 5 HOH A 35 435 59 HOH HOH . 
Y 5 HOH A 36 436 114 HOH HOH . 
Y 5 HOH A 37 437 27 HOH HOH . 
Z 5 HOH B 1 401 115 HOH HOH . 
Z 5 HOH B 2 402 98 HOH HOH . 
Z 5 HOH B 3 403 65 HOH HOH . 
Z 5 HOH B 4 404 120 HOH HOH . 
Z 5 HOH B 5 405 103 HOH HOH . 
Z 5 HOH B 6 406 134 HOH HOH . 
Z 5 HOH B 7 407 136 HOH HOH . 
Z 5 HOH B 8 408 121 HOH HOH . 
Z 5 HOH B 9 409 93 HOH HOH . 
Z 5 HOH B 10 410 60 HOH HOH . 
Z 5 HOH B 11 411 137 HOH HOH . 
Z 5 HOH B 12 412 23 HOH HOH . 
Z 5 HOH B 13 413 101 HOH HOH . 
Z 5 HOH B 14 414 24 HOH HOH . 
Z 5 HOH B 15 415 113 HOH HOH . 
Z 5 HOH B 16 416 116 HOH HOH . 
Z 5 HOH B 17 417 117 HOH HOH . 
Z 5 HOH B 18 418 22 HOH HOH . 
Z 5 HOH B 19 419 74 HOH HOH . 
Z 5 HOH B 20 420 50 HOH HOH . 
Z 5 HOH B 21 421 62 HOH HOH . 
Z 5 HOH B 22 422 20 HOH HOH . 
Z 5 HOH B 23 423 57 HOH HOH . 
Z 5 HOH B 24 424 61 HOH HOH . 
Z 5 HOH B 25 425 63 HOH HOH . 
Z 5 HOH B 26 426 21 HOH HOH . 
Z 5 HOH B 27 427 135 HOH HOH . 
Z 5 HOH B 28 428 119 HOH HOH . 
Z 5 HOH B 29 429 85 HOH HOH . 
Z 5 HOH B 30 430 64 HOH HOH . 
Z 5 HOH B 31 431 138 HOH HOH . 
AA 5 HOH C 1 401 34 HOH HOH . 
AA 5 HOH C 2 402 36 HOH HOH . 
AA 5 HOH C 3 403 110 HOH HOH . 
AA 5 HOH C 4 404 40 HOH HOH . 
AA 5 HOH C 5 405 104 HOH HOH . 
AA 5 HOH C 6 406 107 HOH HOH . 
AA 5 HOH C 7 407 105 HOH HOH . 
AA 5 HOH C 8 408 69 HOH HOH . 
AA 5 HOH C 9 409 68 HOH HOH . 
AA 5 HOH C 10 410 127 HOH HOH . 
AA 5 HOH C 11 411 73 HOH HOH . 
AA 5 HOH C 12 412 122 HOH HOH . 
AA 5 HOH C 13 413 33 HOH HOH . 
AA 5 HOH C 14 414 124 HOH HOH . 
AA 5 HOH C 15 415 109 HOH HOH . 
AA 5 HOH C 16 416 30 HOH HOH . 
AA 5 HOH C 17 417 67 HOH HOH . 
AA 5 HOH C 18 418 77 HOH HOH . 
AA 5 HOH C 19 419 37 HOH HOH . 
AA 5 HOH C 20 420 89 HOH HOH . 
AA 5 HOH C 21 421 29 HOH HOH . 
AA 5 HOH C 22 422 72 HOH HOH . 
AA 5 HOH C 23 423 111 HOH HOH . 
AA 5 HOH C 24 424 32 HOH HOH . 
AA 5 HOH C 25 425 28 HOH HOH . 
AA 5 HOH C 26 426 75 HOH HOH . 
AA 5 HOH C 27 427 54 HOH HOH . 
AA 5 HOH C 28 428 82 HOH HOH . 
AA 5 HOH C 29 429 39 HOH HOH . 
AA 5 HOH C 30 430 71 HOH HOH . 
AA 5 HOH C 31 431 70 HOH HOH . 
AA 5 HOH C 32 432 96 HOH HOH . 
AA 5 HOH C 33 433 78 HOH HOH . 
AA 5 HOH C 34 434 31 HOH HOH . 
AA 5 HOH C 35 435 35 HOH HOH . 
AA 5 HOH C 36 436 131 HOH HOH . 
AA 5 HOH C 37 437 79 HOH HOH . 
BA 5 HOH D 1 401 42 HOH HOH . 
BA 5 HOH D 2 402 83 HOH HOH . 
BA 5 HOH D 3 403 91 HOH HOH . 
BA 5 HOH D 4 404 99 HOH HOH . 
BA 5 HOH D 5 405 76 HOH HOH . 
BA 5 HOH D 6 406 90 HOH HOH . 
BA 5 HOH D 7 407 45 HOH HOH . 
BA 5 HOH D 8 408 80 HOH HOH . 
BA 5 HOH D 9 409 133 HOH HOH . 
BA 5 HOH D 10 410 118 HOH HOH . 
BA 5 HOH D 11 411 86 HOH HOH . 
BA 5 HOH D 12 412 92 HOH HOH . 
BA 5 HOH D 13 413 94 HOH HOH . 
BA 5 HOH D 14 414 46 HOH HOH . 
BA 5 HOH D 15 415 25 HOH HOH . 
BA 5 HOH D 16 416 132 HOH HOH . 
BA 5 HOH D 17 417 43 HOH HOH . 
BA 5 HOH D 18 418 44 HOH HOH . 
BA 5 HOH D 19 419 41 HOH HOH . 
BA 5 HOH D 20 420 88 HOH HOH . 
BA 5 HOH D 21 421 48 HOH HOH . 
BA 5 HOH D 22 422 7 HOH HOH . 
BA 5 HOH D 23 423 84 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . F 2 -43.105 15.416 -16.503 1 67.79 ? C1 GOL 302 A 1 
HETATM 2 O O1 GOL . . . F 2 -42.203 15.738 -17.521 1 61.56 ? O1 GOL 302 A 1 
HETATM 3 C C2 GOL . . . F 2 -42.766 13.966 -16.086 1 82.16 ? C2 GOL 302 A 1 
HETATM 4 O O2 GOL . . . F 2 -41.401 13.798 -15.894 1 78.25 ? O2 GOL 302 A 1 
HETATM 5 C C3 GOL . . . F 2 -43.612 13.681 -14.804 1 69.55 ? C3 GOL 302 A 1 
HETATM 6 O O3 GOL . . . F 2 -43.292 12.384 -14.368 1 62 ? O3 GOL 302 A 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    8 
_model_server_stats.query_time_ms           226 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           6 
#