data_7S3W # _model_server_result.job_id tRtDd2r65GBn6psQjrdGdA _model_server_result.datetime_utc '2024-10-11 11:19:26' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s3w # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":207}' # _entry.id 7S3W # _exptl.entry_id 7S3W _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S3W _cell.length_a 103.441 _cell.length_b 103.441 _cell.length_c 103.441 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S3W _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 3 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 5 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 130 A ASN 108 1_555 H NA NA . A NA 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc2 A OD1 ASN 130 A ASN 108 1_555 H NA NA . A NA 207 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.219 ? metalc ? metalc3 H NA NA . A NA 207 1_555 I O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? metalc ? metalc4 H NA NA . A NA 207 1_555 I O HOH . A HOH 307 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.187 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7S3W _atom_sites.fract_transf_matrix[1][1] 0.009667 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009667 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009667 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 T3F A 1 201 200 T3F T3F . C 3 CAO A 1 202 201 CAO CAO . D 4 EDO A 1 203 1 EDO EDO . E 4 EDO A 1 204 2 EDO EDO . F 4 EDO A 1 205 3 EDO EDO . G 4 EDO A 1 206 4 EDO EDO . H 5 NA A 1 207 1 NA NA . I 6 HOH A 1 301 257 HOH HOH . I 6 HOH A 2 302 183 HOH HOH . I 6 HOH A 3 303 259 HOH HOH . I 6 HOH A 4 304 267 HOH HOH . I 6 HOH A 5 305 212 HOH HOH . I 6 HOH A 6 306 171 HOH HOH . I 6 HOH A 7 307 266 HOH HOH . I 6 HOH A 8 308 200 HOH HOH . I 6 HOH A 9 309 182 HOH HOH . I 6 HOH A 10 310 254 HOH HOH . I 6 HOH A 11 311 236 HOH HOH . I 6 HOH A 12 312 253 HOH HOH . I 6 HOH A 13 313 196 HOH HOH . I 6 HOH A 14 314 27 HOH HOH . I 6 HOH A 15 315 3 HOH HOH . I 6 HOH A 16 316 261 HOH HOH . I 6 HOH A 17 317 161 HOH HOH . I 6 HOH A 18 318 34 HOH HOH . I 6 HOH A 19 319 250 HOH HOH . I 6 HOH A 20 320 99 HOH HOH . I 6 HOH A 21 321 107 HOH HOH . I 6 HOH A 22 322 102 HOH HOH . I 6 HOH A 23 323 97 HOH HOH . I 6 HOH A 24 324 211 HOH HOH . I 6 HOH A 25 325 57 HOH HOH . I 6 HOH A 26 326 72 HOH HOH . I 6 HOH A 27 327 61 HOH HOH . I 6 HOH A 28 328 25 HOH HOH . I 6 HOH A 29 329 19 HOH HOH . I 6 HOH A 30 330 162 HOH HOH . I 6 HOH A 31 331 63 HOH HOH . I 6 HOH A 32 332 37 HOH HOH . I 6 HOH A 33 333 52 HOH HOH . I 6 HOH A 34 334 158 HOH HOH . I 6 HOH A 35 335 60 HOH HOH . I 6 HOH A 36 336 169 HOH HOH . I 6 HOH A 37 337 11 HOH HOH . I 6 HOH A 38 338 93 HOH HOH . I 6 HOH A 39 339 96 HOH HOH . I 6 HOH A 40 340 111 HOH HOH . I 6 HOH A 41 341 215 HOH HOH . I 6 HOH A 42 342 210 HOH HOH . I 6 HOH A 43 343 191 HOH HOH . I 6 HOH A 44 344 163 HOH HOH . I 6 HOH A 45 345 47 HOH HOH . I 6 HOH A 46 346 94 HOH HOH . I 6 HOH A 47 347 149 HOH HOH . I 6 HOH A 48 348 73 HOH HOH . I 6 HOH A 49 349 74 HOH HOH . I 6 HOH A 50 350 188 HOH HOH . I 6 HOH A 51 351 31 HOH HOH . I 6 HOH A 52 352 104 HOH HOH . I 6 HOH A 53 353 243 HOH HOH . I 6 HOH A 54 354 17 HOH HOH . I 6 HOH A 55 355 48 HOH HOH . I 6 HOH A 56 356 109 HOH HOH . I 6 HOH A 57 357 80 HOH HOH . I 6 HOH A 58 358 8 HOH HOH . I 6 HOH A 59 359 213 HOH HOH . I 6 HOH A 60 360 20 HOH HOH . I 6 HOH A 61 361 43 HOH HOH . I 6 HOH A 62 362 55 HOH HOH . I 6 HOH A 63 363 145 HOH HOH . I 6 HOH A 64 364 148 HOH HOH . I 6 HOH A 65 365 15 HOH HOH . I 6 HOH A 66 366 59 HOH HOH . I 6 HOH A 67 367 116 HOH HOH . I 6 HOH A 68 368 216 HOH HOH . I 6 HOH A 69 369 147 HOH HOH . I 6 HOH A 70 370 50 HOH HOH . I 6 HOH A 71 371 155 HOH HOH . I 6 HOH A 72 372 18 HOH HOH . I 6 HOH A 73 373 152 HOH HOH . I 6 HOH A 74 374 115 HOH HOH . I 6 HOH A 75 375 178 HOH HOH . I 6 HOH A 76 376 13 HOH HOH . I 6 HOH A 77 377 33 HOH HOH . I 6 HOH A 78 378 12 HOH HOH . I 6 HOH A 79 379 41 HOH HOH . I 6 HOH A 80 380 62 HOH HOH . I 6 HOH A 81 381 168 HOH HOH . I 6 HOH A 82 382 64 HOH HOH . I 6 HOH A 83 383 44 HOH HOH . I 6 HOH A 84 384 6 HOH HOH . I 6 HOH A 85 385 100 HOH HOH . I 6 HOH A 86 386 234 HOH HOH . I 6 HOH A 87 387 5 HOH HOH . I 6 HOH A 88 388 159 HOH HOH . I 6 HOH A 89 389 87 HOH HOH . I 6 HOH A 90 390 53 HOH HOH . I 6 HOH A 91 391 42 HOH HOH . I 6 HOH A 92 392 255 HOH HOH . I 6 HOH A 93 393 1 HOH HOH . I 6 HOH A 94 394 156 HOH HOH . I 6 HOH A 95 395 91 HOH HOH . I 6 HOH A 96 396 222 HOH HOH . I 6 HOH A 97 397 51 HOH HOH . I 6 HOH A 98 398 246 HOH HOH . I 6 HOH A 99 399 14 HOH HOH . I 6 HOH A 100 400 247 HOH HOH . I 6 HOH A 101 401 7 HOH HOH . I 6 HOH A 102 402 124 HOH HOH . I 6 HOH A 103 403 49 HOH HOH . I 6 HOH A 104 404 30 HOH HOH . I 6 HOH A 105 405 24 HOH HOH . I 6 HOH A 106 406 54 HOH HOH . I 6 HOH A 107 407 179 HOH HOH . I 6 HOH A 108 408 69 HOH HOH . I 6 HOH A 109 409 45 HOH HOH . I 6 HOH A 110 410 131 HOH HOH . I 6 HOH A 111 411 223 HOH HOH . I 6 HOH A 112 412 39 HOH HOH . I 6 HOH A 113 413 88 HOH HOH . I 6 HOH A 114 414 75 HOH HOH . I 6 HOH A 115 415 23 HOH HOH . I 6 HOH A 116 416 170 HOH HOH . I 6 HOH A 117 417 110 HOH HOH . I 6 HOH A 118 418 79 HOH HOH . I 6 HOH A 119 419 58 HOH HOH . I 6 HOH A 120 420 106 HOH HOH . I 6 HOH A 121 421 164 HOH HOH . I 6 HOH A 122 422 36 HOH HOH . I 6 HOH A 123 423 114 HOH HOH . I 6 HOH A 124 424 2 HOH HOH . I 6 HOH A 125 425 90 HOH HOH . I 6 HOH A 126 426 193 HOH HOH . I 6 HOH A 127 427 180 HOH HOH . I 6 HOH A 128 428 68 HOH HOH . I 6 HOH A 129 429 181 HOH HOH . I 6 HOH A 130 430 81 HOH HOH . I 6 HOH A 131 431 256 HOH HOH . I 6 HOH A 132 432 127 HOH HOH . I 6 HOH A 133 433 172 HOH HOH . I 6 HOH A 134 434 185 HOH HOH . I 6 HOH A 135 435 118 HOH HOH . I 6 HOH A 136 436 108 HOH HOH . I 6 HOH A 137 437 260 HOH HOH . I 6 HOH A 138 438 187 HOH HOH . I 6 HOH A 139 439 103 HOH HOH . I 6 HOH A 140 440 46 HOH HOH . I 6 HOH A 141 441 16 HOH HOH . I 6 HOH A 142 442 227 HOH HOH . I 6 HOH A 143 443 129 HOH HOH . I 6 HOH A 144 444 198 HOH HOH . I 6 HOH A 145 445 32 HOH HOH . I 6 HOH A 146 446 220 HOH HOH . I 6 HOH A 147 447 10 HOH HOH . I 6 HOH A 148 448 204 HOH HOH . I 6 HOH A 149 449 228 HOH HOH . I 6 HOH A 150 450 184 HOH HOH . I 6 HOH A 151 451 4 HOH HOH . I 6 HOH A 152 452 229 HOH HOH . I 6 HOH A 153 453 206 HOH HOH . I 6 HOH A 154 454 38 HOH HOH . I 6 HOH A 155 455 217 HOH HOH . I 6 HOH A 156 456 67 HOH HOH . I 6 HOH A 157 457 167 HOH HOH . I 6 HOH A 158 458 207 HOH HOH . I 6 HOH A 159 459 21 HOH HOH . I 6 HOH A 160 460 77 HOH HOH . I 6 HOH A 161 461 248 HOH HOH . I 6 HOH A 162 462 146 HOH HOH . I 6 HOH A 163 463 139 HOH HOH . I 6 HOH A 164 464 221 HOH HOH . I 6 HOH A 165 465 135 HOH HOH . I 6 HOH A 166 466 123 HOH HOH . I 6 HOH A 167 467 203 HOH HOH . I 6 HOH A 168 468 186 HOH HOH . I 6 HOH A 169 469 85 HOH HOH . I 6 HOH A 170 470 130 HOH HOH . I 6 HOH A 171 471 218 HOH HOH . I 6 HOH A 172 472 233 HOH HOH . I 6 HOH A 173 473 263 HOH HOH . I 6 HOH A 174 474 242 HOH HOH . I 6 HOH A 175 475 153 HOH HOH . I 6 HOH A 176 476 251 HOH HOH . I 6 HOH A 177 477 176 HOH HOH . I 6 HOH A 178 478 136 HOH HOH . I 6 HOH A 179 479 98 HOH HOH . I 6 HOH A 180 480 201 HOH HOH . I 6 HOH A 181 481 214 HOH HOH . I 6 HOH A 182 482 101 HOH HOH . I 6 HOH A 183 483 174 HOH HOH . I 6 HOH A 184 484 65 HOH HOH . I 6 HOH A 185 485 195 HOH HOH . I 6 HOH A 186 486 22 HOH HOH . I 6 HOH A 187 487 151 HOH HOH . I 6 HOH A 188 488 202 HOH HOH . I 6 HOH A 189 489 209 HOH HOH . I 6 HOH A 190 490 117 HOH HOH . I 6 HOH A 191 491 89 HOH HOH . I 6 HOH A 192 492 245 HOH HOH . I 6 HOH A 193 493 76 HOH HOH . I 6 HOH A 194 494 29 HOH HOH . I 6 HOH A 195 495 157 HOH HOH . I 6 HOH A 196 496 150 HOH HOH . I 6 HOH A 197 497 194 HOH HOH . I 6 HOH A 198 498 268 HOH HOH . I 6 HOH A 199 499 208 HOH HOH . I 6 HOH A 200 500 144 HOH HOH . I 6 HOH A 201 501 197 HOH HOH . I 6 HOH A 202 502 126 HOH HOH . I 6 HOH A 203 503 82 HOH HOH . I 6 HOH A 204 504 205 HOH HOH . I 6 HOH A 205 505 244 HOH HOH . I 6 HOH A 206 506 165 HOH HOH . I 6 HOH A 207 507 232 HOH HOH . I 6 HOH A 208 508 141 HOH HOH . I 6 HOH A 209 509 199 HOH HOH . I 6 HOH A 210 510 264 HOH HOH . I 6 HOH A 211 511 226 HOH HOH . I 6 HOH A 212 512 40 HOH HOH . I 6 HOH A 213 513 192 HOH HOH . I 6 HOH A 214 514 231 HOH HOH . I 6 HOH A 215 515 143 HOH HOH . I 6 HOH A 216 516 128 HOH HOH . I 6 HOH A 217 517 238 HOH HOH . I 6 HOH A 218 518 235 HOH HOH . I 6 HOH A 219 519 230 HOH HOH . I 6 HOH A 220 520 237 HOH HOH . I 6 HOH A 221 521 249 HOH HOH . I 6 HOH A 222 522 241 HOH HOH . I 6 HOH A 223 523 66 HOH HOH . I 6 HOH A 224 524 225 HOH HOH . I 6 HOH A 225 525 119 HOH HOH . I 6 HOH A 226 526 120 HOH HOH . I 6 HOH A 227 527 70 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 5 _atom_site.Cartn_x -27.984 _atom_site.Cartn_y -27.984 _atom_site.Cartn_z 27.984 _atom_site.occupancy 0.33 _atom_site.B_iso_or_equiv 13.21 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 207 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 1 #