data_7S3Y # _model_server_result.job_id Ec_nj2xyvmE2w7yYtfNpqg _model_server_result.datetime_utc '2024-11-14 04:59:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s3y # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":806}' # _entry.id 7S3Y # _exptl.entry_id 7S3Y _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S3Y _cell.length_a 51.43 _cell.length_b 110.381 _cell.length_c 163.58 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S3Y _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 30 A CYS 326 1_555 H ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.316 ? metalc ? metalc2 A SG CYS 35 A CYS 331 1_555 H ZN ZN . A ZN 806 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.373 ? metalc ? metalc3 A SG CYS 119 A CYS 415 1_555 C FE HEM . A HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.361 ? metalc ? metalc4 H ZN ZN . A ZN 806 1_555 B SG CYS 30 B CYS 326 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.426 ? metalc ? metalc5 H ZN ZN . A ZN 806 1_555 B SG CYS 35 B CYS 331 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.385 ? metalc ? metalc6 B SG CYS 119 B CYS 415 1_555 I FE HEM . B HEM 801 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.332 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7S3Y _atom_sites.fract_transf_matrix[1][1] 0.019444 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006113 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 801 750 HEM HEM . D 3 H4B A 1 802 760 H4B BH4 . E 4 V5G A 1 803 800 V5G 5W0 . F 5 ACT A 1 804 860 ACT ACT . G 6 GOL A 1 805 880 GOL GOL . H 7 ZN A 1 806 900 ZN ZN . I 2 HEM B 1 801 750 HEM HEM . J 3 H4B B 1 802 760 H4B BH4 . K 4 V5G B 1 803 800 V5G 5W0 . L 5 ACT B 1 804 860 ACT ACT . M 6 GOL B 1 805 880 GOL GOL . N 8 HOH A 1 901 223 HOH HOH . N 8 HOH A 2 902 182 HOH HOH . N 8 HOH A 3 903 221 HOH HOH . N 8 HOH A 4 904 226 HOH HOH . N 8 HOH A 5 905 213 HOH HOH . N 8 HOH A 6 906 140 HOH HOH . N 8 HOH A 7 907 25 HOH HOH . N 8 HOH A 8 908 83 HOH HOH . N 8 HOH A 9 909 16 HOH HOH . N 8 HOH A 10 910 179 HOH HOH . N 8 HOH A 11 911 217 HOH HOH . N 8 HOH A 12 912 216 HOH HOH . N 8 HOH A 13 913 127 HOH HOH . N 8 HOH A 14 914 199 HOH HOH . N 8 HOH A 15 915 188 HOH HOH . N 8 HOH A 16 916 129 HOH HOH . N 8 HOH A 17 917 48 HOH HOH . N 8 HOH A 18 918 84 HOH HOH . N 8 HOH A 19 919 135 HOH HOH . N 8 HOH A 20 920 154 HOH HOH . N 8 HOH A 21 921 212 HOH HOH . N 8 HOH A 22 922 43 HOH HOH . N 8 HOH A 23 923 3 HOH HOH . N 8 HOH A 24 924 1 HOH HOH . N 8 HOH A 25 925 111 HOH HOH . N 8 HOH A 26 926 222 HOH HOH . N 8 HOH A 27 927 209 HOH HOH . N 8 HOH A 28 928 90 HOH HOH . N 8 HOH A 29 929 173 HOH HOH . N 8 HOH A 30 930 10 HOH HOH . N 8 HOH A 31 931 27 HOH HOH . N 8 HOH A 32 932 121 HOH HOH . N 8 HOH A 33 933 143 HOH HOH . N 8 HOH A 34 934 110 HOH HOH . N 8 HOH A 35 935 207 HOH HOH . N 8 HOH A 36 936 35 HOH HOH . N 8 HOH A 37 937 172 HOH HOH . N 8 HOH A 38 938 80 HOH HOH . N 8 HOH A 39 939 133 HOH HOH . N 8 HOH A 40 940 180 HOH HOH . N 8 HOH A 41 941 225 HOH HOH . N 8 HOH A 42 942 101 HOH HOH . N 8 HOH A 43 943 19 HOH HOH . N 8 HOH A 44 944 68 HOH HOH . N 8 HOH A 45 945 54 HOH HOH . N 8 HOH A 46 946 56 HOH HOH . N 8 HOH A 47 947 41 HOH HOH . N 8 HOH A 48 948 71 HOH HOH . N 8 HOH A 49 949 59 HOH HOH . N 8 HOH A 50 950 192 HOH HOH . N 8 HOH A 51 951 235 HOH HOH . N 8 HOH A 52 952 130 HOH HOH . N 8 HOH A 53 953 89 HOH HOH . N 8 HOH A 54 954 18 HOH HOH . N 8 HOH A 55 955 73 HOH HOH . N 8 HOH A 56 956 187 HOH HOH . N 8 HOH A 57 957 211 HOH HOH . N 8 HOH A 58 958 63 HOH HOH . N 8 HOH A 59 959 117 HOH HOH . N 8 HOH A 60 960 65 HOH HOH . N 8 HOH A 61 961 208 HOH HOH . N 8 HOH A 62 962 204 HOH HOH . N 8 HOH A 63 963 177 HOH HOH . N 8 HOH A 64 964 49 HOH HOH . N 8 HOH A 65 965 11 HOH HOH . N 8 HOH A 66 966 24 HOH HOH . N 8 HOH A 67 967 57 HOH HOH . N 8 HOH A 68 968 183 HOH HOH . N 8 HOH A 69 969 175 HOH HOH . N 8 HOH A 70 970 227 HOH HOH . N 8 HOH A 71 971 77 HOH HOH . N 8 HOH A 72 972 220 HOH HOH . N 8 HOH A 73 973 131 HOH HOH . N 8 HOH A 74 974 215 HOH HOH . N 8 HOH A 75 975 181 HOH HOH . N 8 HOH A 76 976 62 HOH HOH . N 8 HOH A 77 977 99 HOH HOH . N 8 HOH A 78 978 29 HOH HOH . N 8 HOH A 79 979 55 HOH HOH . N 8 HOH A 80 980 224 HOH HOH . N 8 HOH A 81 981 86 HOH HOH . N 8 HOH A 82 982 197 HOH HOH . N 8 HOH A 83 983 28 HOH HOH . N 8 HOH A 84 984 97 HOH HOH . N 8 HOH A 85 985 107 HOH HOH . N 8 HOH A 86 986 178 HOH HOH . N 8 HOH A 87 987 191 HOH HOH . N 8 HOH A 88 988 148 HOH HOH . N 8 HOH A 89 989 114 HOH HOH . N 8 HOH A 90 990 105 HOH HOH . N 8 HOH A 91 991 152 HOH HOH . N 8 HOH A 92 992 47 HOH HOH . N 8 HOH A 93 993 236 HOH HOH . N 8 HOH A 94 994 234 HOH HOH . N 8 HOH A 95 995 219 HOH HOH . N 8 HOH A 96 996 85 HOH HOH . N 8 HOH A 97 997 157 HOH HOH . N 8 HOH A 98 998 176 HOH HOH . N 8 HOH A 99 999 194 HOH HOH . N 8 HOH A 100 1000 229 HOH HOH . N 8 HOH A 101 1001 214 HOH HOH . N 8 HOH A 102 1002 66 HOH HOH . N 8 HOH A 103 1003 196 HOH HOH . N 8 HOH A 104 1004 231 HOH HOH . N 8 HOH A 105 1005 34 HOH HOH . N 8 HOH A 106 1006 139 HOH HOH . N 8 HOH A 107 1007 190 HOH HOH . N 8 HOH A 108 1008 155 HOH HOH . N 8 HOH A 109 1009 210 HOH HOH . N 8 HOH A 110 1010 193 HOH HOH . N 8 HOH A 111 1011 109 HOH HOH . N 8 HOH A 112 1012 218 HOH HOH . N 8 HOH A 113 1013 205 HOH HOH . N 8 HOH A 114 1014 119 HOH HOH . N 8 HOH A 115 1015 202 HOH HOH . N 8 HOH A 116 1016 174 HOH HOH . N 8 HOH A 117 1017 206 HOH HOH . N 8 HOH A 118 1018 280 HOH HOH . N 8 HOH A 119 1019 288 HOH HOH . N 8 HOH A 120 1020 230 HOH HOH . N 8 HOH A 121 1021 198 HOH HOH . N 8 HOH A 122 1022 138 HOH HOH . N 8 HOH A 123 1023 281 HOH HOH . N 8 HOH A 124 1024 201 HOH HOH . N 8 HOH A 125 1025 115 HOH HOH . N 8 HOH A 126 1026 116 HOH HOH . N 8 HOH A 127 1027 195 HOH HOH . N 8 HOH A 128 1028 200 HOH HOH . O 8 HOH B 1 901 243 HOH HOH . O 8 HOH B 2 902 278 HOH HOH . O 8 HOH B 3 903 160 HOH HOH . O 8 HOH B 4 904 250 HOH HOH . O 8 HOH B 5 905 169 HOH HOH . O 8 HOH B 6 906 167 HOH HOH . O 8 HOH B 7 907 40 HOH HOH . O 8 HOH B 8 908 186 HOH HOH . O 8 HOH B 9 909 149 HOH HOH . O 8 HOH B 10 910 15 HOH HOH . O 8 HOH B 11 911 21 HOH HOH . O 8 HOH B 12 912 125 HOH HOH . O 8 HOH B 13 913 147 HOH HOH . O 8 HOH B 14 914 132 HOH HOH . O 8 HOH B 15 915 249 HOH HOH . O 8 HOH B 16 916 151 HOH HOH . O 8 HOH B 17 917 8 HOH HOH . O 8 HOH B 18 918 267 HOH HOH . O 8 HOH B 19 919 102 HOH HOH . O 8 HOH B 20 920 277 HOH HOH . O 8 HOH B 21 921 184 HOH HOH . O 8 HOH B 22 922 37 HOH HOH . O 8 HOH B 23 923 44 HOH HOH . O 8 HOH B 24 924 283 HOH HOH . O 8 HOH B 25 925 20 HOH HOH . O 8 HOH B 26 926 38 HOH HOH . O 8 HOH B 27 927 4 HOH HOH . O 8 HOH B 28 928 170 HOH HOH . O 8 HOH B 29 929 228 HOH HOH . O 8 HOH B 30 930 124 HOH HOH . O 8 HOH B 31 931 108 HOH HOH . O 8 HOH B 32 932 282 HOH HOH . O 8 HOH B 33 933 142 HOH HOH . O 8 HOH B 34 934 100 HOH HOH . O 8 HOH B 35 935 60 HOH HOH . O 8 HOH B 36 936 13 HOH HOH . O 8 HOH B 37 937 241 HOH HOH . O 8 HOH B 38 938 23 HOH HOH . O 8 HOH B 39 939 36 HOH HOH . O 8 HOH B 40 940 104 HOH HOH . O 8 HOH B 41 941 14 HOH HOH . O 8 HOH B 42 942 255 HOH HOH . O 8 HOH B 43 943 45 HOH HOH . O 8 HOH B 44 944 262 HOH HOH . O 8 HOH B 45 945 279 HOH HOH . O 8 HOH B 46 946 185 HOH HOH . O 8 HOH B 47 947 95 HOH HOH . O 8 HOH B 48 948 247 HOH HOH . O 8 HOH B 49 949 46 HOH HOH . O 8 HOH B 50 950 26 HOH HOH . O 8 HOH B 51 951 67 HOH HOH . O 8 HOH B 52 952 7 HOH HOH . O 8 HOH B 53 953 32 HOH HOH . O 8 HOH B 54 954 270 HOH HOH . O 8 HOH B 55 955 5 HOH HOH . O 8 HOH B 56 956 82 HOH HOH . O 8 HOH B 57 957 88 HOH HOH . O 8 HOH B 58 958 64 HOH HOH . O 8 HOH B 59 959 22 HOH HOH . O 8 HOH B 60 960 87 HOH HOH . O 8 HOH B 61 961 6 HOH HOH . O 8 HOH B 62 962 2 HOH HOH . O 8 HOH B 63 963 53 HOH HOH . O 8 HOH B 64 964 128 HOH HOH . O 8 HOH B 65 965 61 HOH HOH . O 8 HOH B 66 966 141 HOH HOH . O 8 HOH B 67 967 265 HOH HOH . O 8 HOH B 68 968 136 HOH HOH . O 8 HOH B 69 969 137 HOH HOH . O 8 HOH B 70 970 122 HOH HOH . O 8 HOH B 71 971 58 HOH HOH . O 8 HOH B 72 972 93 HOH HOH . O 8 HOH B 73 973 271 HOH HOH . O 8 HOH B 74 974 70 HOH HOH . O 8 HOH B 75 975 242 HOH HOH . O 8 HOH B 76 976 112 HOH HOH . O 8 HOH B 77 977 31 HOH HOH . O 8 HOH B 78 978 9 HOH HOH . O 8 HOH B 79 979 69 HOH HOH . O 8 HOH B 80 980 50 HOH HOH . O 8 HOH B 81 981 146 HOH HOH . O 8 HOH B 82 982 272 HOH HOH . O 8 HOH B 83 983 165 HOH HOH . O 8 HOH B 84 984 162 HOH HOH . O 8 HOH B 85 985 74 HOH HOH . O 8 HOH B 86 986 39 HOH HOH . O 8 HOH B 87 987 134 HOH HOH . O 8 HOH B 88 988 78 HOH HOH . O 8 HOH B 89 989 273 HOH HOH . O 8 HOH B 90 990 30 HOH HOH . O 8 HOH B 91 991 171 HOH HOH . O 8 HOH B 92 992 79 HOH HOH . O 8 HOH B 93 993 159 HOH HOH . O 8 HOH B 94 994 81 HOH HOH . O 8 HOH B 95 995 51 HOH HOH . O 8 HOH B 96 996 118 HOH HOH . O 8 HOH B 97 997 261 HOH HOH . O 8 HOH B 98 998 72 HOH HOH . O 8 HOH B 99 999 263 HOH HOH . O 8 HOH B 100 1000 17 HOH HOH . O 8 HOH B 101 1001 96 HOH HOH . O 8 HOH B 102 1002 42 HOH HOH . O 8 HOH B 103 1003 232 HOH HOH . O 8 HOH B 104 1004 75 HOH HOH . O 8 HOH B 105 1005 103 HOH HOH . O 8 HOH B 106 1006 150 HOH HOH . O 8 HOH B 107 1007 257 HOH HOH . O 8 HOH B 108 1008 237 HOH HOH . O 8 HOH B 109 1009 268 HOH HOH . O 8 HOH B 110 1010 266 HOH HOH . O 8 HOH B 111 1011 120 HOH HOH . O 8 HOH B 112 1012 203 HOH HOH . O 8 HOH B 113 1013 113 HOH HOH . O 8 HOH B 114 1014 33 HOH HOH . O 8 HOH B 115 1015 287 HOH HOH . O 8 HOH B 116 1016 276 HOH HOH . O 8 HOH B 117 1017 91 HOH HOH . O 8 HOH B 118 1018 264 HOH HOH . O 8 HOH B 119 1019 52 HOH HOH . O 8 HOH B 120 1020 12 HOH HOH . O 8 HOH B 121 1021 126 HOH HOH . O 8 HOH B 122 1022 275 HOH HOH . O 8 HOH B 123 1023 76 HOH HOH . O 8 HOH B 124 1024 145 HOH HOH . O 8 HOH B 125 1025 158 HOH HOH . O 8 HOH B 126 1026 168 HOH HOH . O 8 HOH B 127 1027 106 HOH HOH . O 8 HOH B 128 1028 248 HOH HOH . O 8 HOH B 129 1029 161 HOH HOH . O 8 HOH B 130 1030 166 HOH HOH . O 8 HOH B 131 1031 92 HOH HOH . O 8 HOH B 132 1032 153 HOH HOH . O 8 HOH B 133 1033 252 HOH HOH . O 8 HOH B 134 1034 94 HOH HOH . O 8 HOH B 135 1035 260 HOH HOH . O 8 HOH B 136 1036 156 HOH HOH . O 8 HOH B 137 1037 238 HOH HOH . O 8 HOH B 138 1038 163 HOH HOH . O 8 HOH B 139 1039 164 HOH HOH . O 8 HOH B 140 1040 254 HOH HOH . O 8 HOH B 141 1041 244 HOH HOH . O 8 HOH B 142 1042 251 HOH HOH . O 8 HOH B 143 1043 286 HOH HOH . O 8 HOH B 144 1044 245 HOH HOH . O 8 HOH B 145 1045 240 HOH HOH . O 8 HOH B 146 1046 123 HOH HOH . O 8 HOH B 147 1047 284 HOH HOH . O 8 HOH B 148 1048 98 HOH HOH . O 8 HOH B 149 1049 239 HOH HOH . O 8 HOH B 150 1050 246 HOH HOH . O 8 HOH B 151 1051 253 HOH HOH . O 8 HOH B 152 1052 189 HOH HOH . O 8 HOH B 153 1053 285 HOH HOH . O 8 HOH B 154 1054 258 HOH HOH . O 8 HOH B 155 1055 269 HOH HOH . O 8 HOH B 156 1056 144 HOH HOH . O 8 HOH B 157 1057 274 HOH HOH . O 8 HOH B 158 1058 256 HOH HOH . O 8 HOH B 159 1059 233 HOH HOH . O 8 HOH B 160 1060 259 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id H _atom_site.label_entity_id 7 _atom_site.Cartn_x 8.955 _atom_site.Cartn_y 16.278 _atom_site.Cartn_z 41.151 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 43.46 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 806 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 131 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 370 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #