data_7S43 # _model_server_result.job_id srKUWHciuCJIIJw_YpeDYw _model_server_result.datetime_utc '2024-11-28 22:06:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s43 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":203}' # _entry.id 7S43 # _exptl.entry_id 7S43 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S43 _cell.length_a 102.844 _cell.length_b 102.844 _cell.length_c 102.844 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S43 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_555 -z,x,-y 0 0 -1 1 0 0 0 -1 0 0 0 0 3 'crystal symmetry operation' 11_555 y,-z,-x 0 1 0 0 0 -1 -1 0 0 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 130 A ASN 108 1_555 E NA NA . A NA 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc2 A OD1 ASN 130 A ASN 108 1_555 E NA NA . A NA 204 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.394 ? metalc ? metalc3 E NA NA . A NA 204 1_555 F O HOH . A HOH 314 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? metalc ? metalc4 E NA NA . A NA 204 1_555 F O HOH . A HOH 314 8_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.366 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 169 n n C1 C2 EDO sing 170 n n C1 H11 EDO sing 171 n n C1 H12 EDO sing 172 n n O1 HO1 EDO sing 173 n n C2 O2 EDO sing 174 n n C2 H21 EDO sing 175 n n C2 H22 EDO sing 176 n n O2 HO2 EDO sing 177 n n # _atom_sites.entry_id 7S43 _atom_sites.fract_transf_matrix[1][1] 0.009723 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009723 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009723 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 T3Q A 1 201 200 T3Q T3Q . C 3 COA A 1 202 201 COA COA . D 4 EDO A 1 203 1 EDO EDO . E 5 NA A 1 204 1 NA NA . F 6 HOH A 1 301 211 HOH HOH . F 6 HOH A 2 302 205 HOH HOH . F 6 HOH A 3 303 152 HOH HOH . F 6 HOH A 4 304 28 HOH HOH . F 6 HOH A 5 305 201 HOH HOH . F 6 HOH A 6 306 111 HOH HOH . F 6 HOH A 7 307 210 HOH HOH . F 6 HOH A 8 308 202 HOH HOH . F 6 HOH A 9 309 11 HOH HOH . F 6 HOH A 10 310 162 HOH HOH . F 6 HOH A 11 311 104 HOH HOH . F 6 HOH A 12 312 163 HOH HOH . F 6 HOH A 13 313 195 HOH HOH . F 6 HOH A 14 314 194 HOH HOH . F 6 HOH A 15 315 199 HOH HOH . F 6 HOH A 16 316 60 HOH HOH . F 6 HOH A 17 317 158 HOH HOH . F 6 HOH A 18 318 74 HOH HOH . F 6 HOH A 19 319 188 HOH HOH . F 6 HOH A 20 320 53 HOH HOH . F 6 HOH A 21 321 37 HOH HOH . F 6 HOH A 22 322 19 HOH HOH . F 6 HOH A 23 323 20 HOH HOH . F 6 HOH A 24 324 102 HOH HOH . F 6 HOH A 25 325 149 HOH HOH . F 6 HOH A 26 326 25 HOH HOH . F 6 HOH A 27 327 96 HOH HOH . F 6 HOH A 28 328 93 HOH HOH . F 6 HOH A 29 329 52 HOH HOH . F 6 HOH A 30 330 45 HOH HOH . F 6 HOH A 31 331 156 HOH HOH . F 6 HOH A 32 332 34 HOH HOH . F 6 HOH A 33 333 8 HOH HOH . F 6 HOH A 34 334 3 HOH HOH . F 6 HOH A 35 335 57 HOH HOH . F 6 HOH A 36 336 15 HOH HOH . F 6 HOH A 37 337 124 HOH HOH . F 6 HOH A 38 338 178 HOH HOH . F 6 HOH A 39 339 109 HOH HOH . F 6 HOH A 40 340 33 HOH HOH . F 6 HOH A 41 341 49 HOH HOH . F 6 HOH A 42 342 115 HOH HOH . F 6 HOH A 43 343 47 HOH HOH . F 6 HOH A 44 344 1 HOH HOH . F 6 HOH A 45 345 72 HOH HOH . F 6 HOH A 46 346 18 HOH HOH . F 6 HOH A 47 347 94 HOH HOH . F 6 HOH A 48 348 97 HOH HOH . F 6 HOH A 49 349 148 HOH HOH . F 6 HOH A 50 350 12 HOH HOH . F 6 HOH A 51 351 63 HOH HOH . F 6 HOH A 52 352 155 HOH HOH . F 6 HOH A 53 353 147 HOH HOH . F 6 HOH A 54 354 13 HOH HOH . F 6 HOH A 55 355 17 HOH HOH . F 6 HOH A 56 356 5 HOH HOH . F 6 HOH A 57 357 81 HOH HOH . F 6 HOH A 58 358 42 HOH HOH . F 6 HOH A 59 359 43 HOH HOH . F 6 HOH A 60 360 99 HOH HOH . F 6 HOH A 61 361 31 HOH HOH . F 6 HOH A 62 362 107 HOH HOH . F 6 HOH A 63 363 61 HOH HOH . F 6 HOH A 64 364 179 HOH HOH . F 6 HOH A 65 365 91 HOH HOH . F 6 HOH A 66 366 79 HOH HOH . F 6 HOH A 67 367 58 HOH HOH . F 6 HOH A 68 368 127 HOH HOH . F 6 HOH A 69 369 48 HOH HOH . F 6 HOH A 70 370 30 HOH HOH . F 6 HOH A 71 371 204 HOH HOH . F 6 HOH A 72 372 206 HOH HOH . F 6 HOH A 73 373 7 HOH HOH . F 6 HOH A 74 374 46 HOH HOH . F 6 HOH A 75 375 59 HOH HOH . F 6 HOH A 76 376 129 HOH HOH . F 6 HOH A 77 377 51 HOH HOH . F 6 HOH A 78 378 27 HOH HOH . F 6 HOH A 79 379 170 HOH HOH . F 6 HOH A 80 380 69 HOH HOH . F 6 HOH A 81 381 131 HOH HOH . F 6 HOH A 82 382 24 HOH HOH . F 6 HOH A 83 383 44 HOH HOH . F 6 HOH A 84 384 55 HOH HOH . F 6 HOH A 85 385 41 HOH HOH . F 6 HOH A 86 386 168 HOH HOH . F 6 HOH A 87 387 2 HOH HOH . F 6 HOH A 88 388 6 HOH HOH . F 6 HOH A 89 389 23 HOH HOH . F 6 HOH A 90 390 164 HOH HOH . F 6 HOH A 91 391 106 HOH HOH . F 6 HOH A 92 392 54 HOH HOH . F 6 HOH A 93 393 213 HOH HOH . F 6 HOH A 94 394 172 HOH HOH . F 6 HOH A 95 395 36 HOH HOH . F 6 HOH A 96 396 108 HOH HOH . F 6 HOH A 97 397 62 HOH HOH . F 6 HOH A 98 398 38 HOH HOH . F 6 HOH A 99 399 14 HOH HOH . F 6 HOH A 100 400 169 HOH HOH . F 6 HOH A 101 401 212 HOH HOH . F 6 HOH A 102 402 39 HOH HOH . F 6 HOH A 103 403 159 HOH HOH . F 6 HOH A 104 404 75 HOH HOH . F 6 HOH A 105 405 64 HOH HOH . F 6 HOH A 106 406 103 HOH HOH . F 6 HOH A 107 407 73 HOH HOH . F 6 HOH A 108 408 56 HOH HOH . F 6 HOH A 109 409 10 HOH HOH . F 6 HOH A 110 410 67 HOH HOH . F 6 HOH A 111 411 146 HOH HOH . F 6 HOH A 112 412 209 HOH HOH . F 6 HOH A 113 413 21 HOH HOH . F 6 HOH A 114 414 180 HOH HOH . F 6 HOH A 115 415 9 HOH HOH . F 6 HOH A 116 416 16 HOH HOH . F 6 HOH A 117 417 32 HOH HOH . F 6 HOH A 118 418 140 HOH HOH . F 6 HOH A 119 419 90 HOH HOH . F 6 HOH A 120 420 77 HOH HOH . F 6 HOH A 121 421 4 HOH HOH . F 6 HOH A 122 422 123 HOH HOH . F 6 HOH A 123 423 68 HOH HOH . F 6 HOH A 124 424 110 HOH HOH . F 6 HOH A 125 425 135 HOH HOH . F 6 HOH A 126 426 181 HOH HOH . F 6 HOH A 127 427 167 HOH HOH . F 6 HOH A 128 428 203 HOH HOH . F 6 HOH A 129 429 136 HOH HOH . F 6 HOH A 130 430 151 HOH HOH . F 6 HOH A 131 431 153 HOH HOH . F 6 HOH A 132 432 160 HOH HOH . F 6 HOH A 133 433 101 HOH HOH . F 6 HOH A 134 434 50 HOH HOH . F 6 HOH A 135 435 139 HOH HOH . F 6 HOH A 136 436 98 HOH HOH . F 6 HOH A 137 437 89 HOH HOH . F 6 HOH A 138 438 182 HOH HOH . F 6 HOH A 139 439 197 HOH HOH . F 6 HOH A 140 440 65 HOH HOH . F 6 HOH A 141 441 171 HOH HOH . F 6 HOH A 142 442 177 HOH HOH . F 6 HOH A 143 443 142 HOH HOH . F 6 HOH A 144 444 85 HOH HOH . F 6 HOH A 145 445 117 HOH HOH . F 6 HOH A 146 446 176 HOH HOH . F 6 HOH A 147 447 200 HOH HOH . F 6 HOH A 148 448 187 HOH HOH . F 6 HOH A 149 449 174 HOH HOH . F 6 HOH A 150 450 150 HOH HOH . F 6 HOH A 151 451 157 HOH HOH . F 6 HOH A 152 452 76 HOH HOH . F 6 HOH A 153 453 22 HOH HOH . F 6 HOH A 154 454 82 HOH HOH . F 6 HOH A 155 455 141 HOH HOH . F 6 HOH A 156 456 40 HOH HOH . F 6 HOH A 157 457 196 HOH HOH . F 6 HOH A 158 458 207 HOH HOH . F 6 HOH A 159 459 173 HOH HOH . F 6 HOH A 160 460 192 HOH HOH . F 6 HOH A 161 461 143 HOH HOH . F 6 HOH A 162 462 165 HOH HOH . F 6 HOH A 163 463 29 HOH HOH . F 6 HOH A 164 464 128 HOH HOH . F 6 HOH A 165 465 80 HOH HOH . F 6 HOH A 166 466 208 HOH HOH . F 6 HOH A 167 467 120 HOH HOH . F 6 HOH A 168 468 66 HOH HOH . F 6 HOH A 169 469 198 HOH HOH . F 6 HOH A 170 470 119 HOH HOH . F 6 HOH A 171 471 70 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 4 -8.842 -41.883 24.631 1 46.46 ? C1 EDO 203 A 1 HETATM 2 O O1 EDO . . . D 4 -9.793 -41.976 25.662 1 42.97 ? O1 EDO 203 A 1 HETATM 3 C C2 EDO . . . D 4 -9.238 -40.936 23.574 1 43.8 ? C2 EDO 203 A 1 HETATM 4 O O2 EDO . . . D 4 -8.826 -41.385 22.303 1 50.71 ? O2 EDO 203 A 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 339 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #