data_7S46 # _model_server_result.job_id lg488qgiJbXQgwgOksESCA _model_server_result.datetime_utc '2024-12-09 01:45:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s46 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":600}' # _entry.id 7S46 # _exptl.entry_id 7S46 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 506.196 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S46 _cell.length_a 61.821 _cell.length_b 61.821 _cell.length_c 178.829 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S46 _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C10 H17 N6 O12 P3' _chem_comp.formula_weight 506.196 _chem_comp.id ANP _chem_comp.mon_nstd_flag . _chem_comp.name 'PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PG O1G ANP doub 13 n n PG O2G ANP sing 14 n n PG O3G ANP sing 15 n n PG N3B ANP sing 16 n n O2G HOG2 ANP sing 17 n n O3G HOG3 ANP sing 18 n n PB O1B ANP doub 19 n n PB O2B ANP sing 20 n n PB N3B ANP sing 21 n n PB O3A ANP sing 22 n n O2B HOB2 ANP sing 23 n n N3B HNB1 ANP sing 24 n n PA O1A ANP doub 25 n n PA O2A ANP sing 26 n n PA O3A ANP sing 27 n n PA O5' ANP sing 28 n n O2A HOA2 ANP sing 29 n n O5' C5' ANP sing 30 n n C5' C4' ANP sing 31 n n C5' "H5'1" ANP sing 32 n n C5' "H5'2" ANP sing 33 n n C4' O4' ANP sing 34 n n C4' C3' ANP sing 35 n n C4' H4' ANP sing 36 n n O4' C1' ANP sing 37 n n C3' O3' ANP sing 38 n n C3' C2' ANP sing 39 n n C3' H3' ANP sing 40 n n O3' HO3' ANP sing 41 n n C2' O2' ANP sing 42 n n C2' C1' ANP sing 43 n n C2' H2' ANP sing 44 n n O2' HO2' ANP sing 45 n n C1' N9 ANP sing 46 n n C1' H1' ANP sing 47 n n N9 C8 ANP sing 48 n y N9 C4 ANP sing 49 n y C8 N7 ANP doub 50 n y C8 H8 ANP sing 51 n n N7 C5 ANP sing 52 n y C5 C6 ANP sing 53 n y C5 C4 ANP doub 54 n y C6 N6 ANP sing 55 n n C6 N1 ANP doub 56 n y N6 HN61 ANP sing 57 n n N6 HN62 ANP sing 58 n n N1 C2 ANP sing 59 n y C2 N3 ANP doub 60 n y C2 H2 ANP sing 61 n n N3 C4 ANP sing 62 n y # _atom_sites.entry_id 7S46 _atom_sites.fract_transf_matrix[1][1] 0.016176 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016176 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005592 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ANP A 1 600 600 ANP ANP . D 4 HOH A 1 701 18 HOH HOH . D 4 HOH A 2 702 39 HOH HOH . D 4 HOH A 3 703 14 HOH HOH . D 4 HOH A 4 704 65 HOH HOH . D 4 HOH A 5 705 52 HOH HOH . D 4 HOH A 6 706 21 HOH HOH . D 4 HOH A 7 707 44 HOH HOH . D 4 HOH A 8 708 35 HOH HOH . D 4 HOH A 9 709 46 HOH HOH . D 4 HOH A 10 710 59 HOH HOH . D 4 HOH A 11 711 25 HOH HOH . D 4 HOH A 12 712 29 HOH HOH . D 4 HOH A 13 713 32 HOH HOH . D 4 HOH A 14 714 58 HOH HOH . D 4 HOH A 15 715 50 HOH HOH . D 4 HOH A 16 716 11 HOH HOH . D 4 HOH A 17 717 10 HOH HOH . D 4 HOH A 18 718 12 HOH HOH . D 4 HOH A 19 719 38 HOH HOH . D 4 HOH A 20 720 1 HOH HOH . D 4 HOH A 21 721 20 HOH HOH . D 4 HOH A 22 722 33 HOH HOH . D 4 HOH A 23 723 37 HOH HOH . D 4 HOH A 24 724 22 HOH HOH . D 4 HOH A 25 725 61 HOH HOH . D 4 HOH A 26 726 9 HOH HOH . D 4 HOH A 27 727 15 HOH HOH . D 4 HOH A 28 728 17 HOH HOH . D 4 HOH A 29 729 36 HOH HOH . D 4 HOH A 30 730 31 HOH HOH . D 4 HOH A 31 731 3 HOH HOH . D 4 HOH A 32 732 57 HOH HOH . D 4 HOH A 33 733 45 HOH HOH . D 4 HOH A 34 734 34 HOH HOH . D 4 HOH A 35 735 23 HOH HOH . D 4 HOH A 36 736 2 HOH HOH . D 4 HOH A 37 737 28 HOH HOH . D 4 HOH A 38 738 16 HOH HOH . D 4 HOH A 39 739 63 HOH HOH . D 4 HOH A 40 740 53 HOH HOH . D 4 HOH A 41 741 54 HOH HOH . D 4 HOH A 42 742 56 HOH HOH . D 4 HOH A 43 743 67 HOH HOH . D 4 HOH A 44 744 64 HOH HOH . D 4 HOH A 45 745 48 HOH HOH . D 4 HOH A 46 746 26 HOH HOH . D 4 HOH A 47 747 8 HOH HOH . D 4 HOH A 48 748 5 HOH HOH . D 4 HOH A 49 749 6 HOH HOH . D 4 HOH A 50 750 27 HOH HOH . D 4 HOH A 51 751 60 HOH HOH . D 4 HOH A 52 752 4 HOH HOH . D 4 HOH A 53 753 41 HOH HOH . D 4 HOH A 54 754 55 HOH HOH . D 4 HOH A 55 755 43 HOH HOH . D 4 HOH A 56 756 13 HOH HOH . D 4 HOH A 57 757 24 HOH HOH . D 4 HOH A 58 758 62 HOH HOH . D 4 HOH A 59 759 66 HOH HOH . D 4 HOH A 60 760 7 HOH HOH . D 4 HOH A 61 761 40 HOH HOH . D 4 HOH A 62 762 49 HOH HOH . D 4 HOH A 63 763 47 HOH HOH . D 4 HOH A 64 764 30 HOH HOH . D 4 HOH A 65 765 19 HOH HOH . D 4 HOH A 66 766 51 HOH HOH . D 4 HOH A 67 767 42 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N9 ANP . . . C 3 -28.958 13.404 -14.04 1 61.67 ? N9 ANP 600 A 1 HETATM 2 C C8 ANP . . . C 3 -27.639 13.644 -13.965 1 59.26 ? C8 ANP 600 A 1 HETATM 3 N N7 ANP . . . C 3 -26.95 12.768 -14.757 1 58.85 ? N7 ANP 600 A 1 HETATM 4 C C5 ANP . . . C 3 -27.821 11.934 -15.354 1 51.72 ? C5 ANP 600 A 1 HETATM 5 C C6 ANP . . . C 3 -27.77 10.774 -16.311 1 53.91 ? C6 ANP 600 A 1 HETATM 6 N N6 ANP . . . C 3 -26.618 10.272 -16.834 1 49.95 ? N6 ANP 600 A 1 HETATM 7 N N1 ANP . . . C 3 -28.947 10.196 -16.669 1 51.39 ? N1 ANP 600 A 1 HETATM 8 C C2 ANP . . . C 3 -30.133 10.646 -16.181 1 56.93 ? C2 ANP 600 A 1 HETATM 9 N N3 ANP . . . C 3 -30.238 11.686 -15.315 1 57.18 ? N3 ANP 600 A 1 HETATM 10 C C4 ANP . . . C 3 -29.146 12.368 -14.873 1 54.15 ? C4 ANP 600 A 1 # _model_server_stats.io_time_ms 28 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 331 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 10 #