data_7S4Z # _model_server_result.job_id 1gZgBiI8Dh5TlZOcTCsg6w _model_server_result.datetime_utc '2024-10-20 20:47:18' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s4z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":303}' # _entry.id 7S4Z # _exptl.entry_id 7S4Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 40.078 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CALCIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S4Z _cell.length_a 68.4 _cell.length_b 68.4 _cell.length_c 108.4 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S4Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 34 A CYS 34 1_555 A SG CYS 123 A CYS 123 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf2 A SG CYS 178 A CYS 178 1_555 A SG CYS 249 A CYS 249 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.008 ? metalc ? metalc1 A O THR 16 A THR 16 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc2 A O PRO 175 A PRO 175 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.368 ? metalc ? metalc3 A O VAL 177 A VAL 177 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.409 ? metalc ? metalc4 A OD1 ASP 200 A ASP 200 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.64 ? metalc ? metalc5 A OD2 ASP 200 A ASP 200 1_555 D CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.422 ? metalc ? metalc6 A OD1 ASP 260 A ASP 260 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.473 ? metalc ? metalc7 A OD2 ASP 260 A ASP 260 1_555 C CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.574 ? metalc ? metalc8 C CA CA . A CA 302 1_555 E O HOH . A HOH 412 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.32 ? metalc ? metalc9 C CA CA . A CA 302 1_555 E O HOH . A HOH 484 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.256 ? metalc ? metalc10 D CA CA . A CA 303 1_555 E O HOH . A HOH 439 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.502 ? metalc ? metalc11 D CA CA . A CA 303 1_555 E O HOH . A HOH 447 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.445 ? metalc ? metalc12 D CA CA . A CA 303 1_555 E O HOH . A HOH 454 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.346 ? metalc ? metalc13 D CA CA . A CA 303 1_555 E O HOH . A HOH 462 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.452 ? # _chem_comp.formula 'Ca 2' _chem_comp.formula_weight 40.078 _chem_comp.id CA _chem_comp.mon_nstd_flag . _chem_comp.name 'CALCIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7S4Z _atom_sites.fract_transf_matrix[1][1] 0.01462 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01462 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009225 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NO3 A 1 301 3 NO3 NO3 . C 3 CA A 1 302 1 CA CA . D 3 CA A 1 303 2 CA CA . E 4 HOH A 1 401 36 HOH HOH . E 4 HOH A 2 402 57 HOH HOH . E 4 HOH A 3 403 31 HOH HOH . E 4 HOH A 4 404 10 HOH HOH . E 4 HOH A 5 405 70 HOH HOH . E 4 HOH A 6 406 50 HOH HOH . E 4 HOH A 7 407 53 HOH HOH . E 4 HOH A 8 408 38 HOH HOH . E 4 HOH A 9 409 61 HOH HOH . E 4 HOH A 10 410 21 HOH HOH . E 4 HOH A 11 411 81 HOH HOH . E 4 HOH A 12 412 37 HOH HOH . E 4 HOH A 13 413 1 HOH HOH . E 4 HOH A 14 414 29 HOH HOH . E 4 HOH A 15 415 7 HOH HOH . E 4 HOH A 16 416 39 HOH HOH . E 4 HOH A 17 417 5 HOH HOH . E 4 HOH A 18 418 83 HOH HOH . E 4 HOH A 19 419 51 HOH HOH . E 4 HOH A 20 420 77 HOH HOH . E 4 HOH A 21 421 76 HOH HOH . E 4 HOH A 22 422 42 HOH HOH . E 4 HOH A 23 423 2 HOH HOH . E 4 HOH A 24 424 74 HOH HOH . E 4 HOH A 25 425 18 HOH HOH . E 4 HOH A 26 426 9 HOH HOH . E 4 HOH A 27 427 48 HOH HOH . E 4 HOH A 28 428 40 HOH HOH . E 4 HOH A 29 429 45 HOH HOH . E 4 HOH A 30 430 60 HOH HOH . E 4 HOH A 31 431 4 HOH HOH . E 4 HOH A 32 432 58 HOH HOH . E 4 HOH A 33 433 26 HOH HOH . E 4 HOH A 34 434 84 HOH HOH . E 4 HOH A 35 435 55 HOH HOH . E 4 HOH A 36 436 22 HOH HOH . E 4 HOH A 37 437 67 HOH HOH . E 4 HOH A 38 438 25 HOH HOH . E 4 HOH A 39 439 16 HOH HOH . E 4 HOH A 40 440 28 HOH HOH . E 4 HOH A 41 441 72 HOH HOH . E 4 HOH A 42 442 32 HOH HOH . E 4 HOH A 43 443 19 HOH HOH . E 4 HOH A 44 444 47 HOH HOH . E 4 HOH A 45 445 75 HOH HOH . E 4 HOH A 46 446 71 HOH HOH . E 4 HOH A 47 447 11 HOH HOH . E 4 HOH A 48 448 54 HOH HOH . E 4 HOH A 49 449 13 HOH HOH . E 4 HOH A 50 450 35 HOH HOH . E 4 HOH A 51 451 56 HOH HOH . E 4 HOH A 52 452 52 HOH HOH . E 4 HOH A 53 453 78 HOH HOH . E 4 HOH A 54 454 14 HOH HOH . E 4 HOH A 55 455 68 HOH HOH . E 4 HOH A 56 456 23 HOH HOH . E 4 HOH A 57 457 73 HOH HOH . E 4 HOH A 58 458 30 HOH HOH . E 4 HOH A 59 459 59 HOH HOH . E 4 HOH A 60 460 15 HOH HOH . E 4 HOH A 61 461 80 HOH HOH . E 4 HOH A 62 462 8 HOH HOH . E 4 HOH A 63 463 24 HOH HOH . E 4 HOH A 64 464 49 HOH HOH . E 4 HOH A 65 465 41 HOH HOH . E 4 HOH A 66 466 87 HOH HOH . E 4 HOH A 67 467 34 HOH HOH . E 4 HOH A 68 468 63 HOH HOH . E 4 HOH A 69 469 12 HOH HOH . E 4 HOH A 70 470 79 HOH HOH . E 4 HOH A 71 471 44 HOH HOH . E 4 HOH A 72 472 20 HOH HOH . E 4 HOH A 73 473 6 HOH HOH . E 4 HOH A 74 474 17 HOH HOH . E 4 HOH A 75 475 33 HOH HOH . E 4 HOH A 76 476 3 HOH HOH . E 4 HOH A 77 477 86 HOH HOH . E 4 HOH A 78 478 64 HOH HOH . E 4 HOH A 79 479 27 HOH HOH . E 4 HOH A 80 480 69 HOH HOH . E 4 HOH A 81 481 43 HOH HOH . E 4 HOH A 82 482 46 HOH HOH . E 4 HOH A 83 483 66 HOH HOH . E 4 HOH A 84 484 62 HOH HOH . E 4 HOH A 85 485 88 HOH HOH . E 4 HOH A 86 486 65 HOH HOH . E 4 HOH A 87 487 89 HOH HOH . E 4 HOH A 88 488 85 HOH HOH . E 4 HOH A 89 489 82 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol CA _atom_site.label_atom_id CA _atom_site.label_comp_id CA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id D _atom_site.label_entity_id 3 _atom_site.Cartn_x 20.491 _atom_site.Cartn_y 0.887 _atom_site.Cartn_z 0.008 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 25.5 _atom_site.pdbx_formal_charge 2 _atom_site.auth_atom_id CA _atom_site.auth_comp_id CA _atom_site.auth_seq_id 303 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 47 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 21 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 1 #