data_7S6U # _model_server_result.job_id f8Dldp1NT1Nrl705DzALEQ _model_server_result.datetime_utc '2024-11-27 20:01:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s6u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":403}' # _entry.id 7S6U # _exptl.entry_id 7S6U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.53 _cell.angle_gamma 90 _cell.entry_id 7S6U _cell.length_a 156.368 _cell.length_b 39.519 _cell.length_c 62.608 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S6U _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 D N N ? 3 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ALA 186 A ALA 185 1_555 A N PTR 187 A PTR 186 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale2 A C PTR 187 A PTR 186 1_555 A N ILE 188 A ILE 187 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 93 n n C1 C2 EDO sing 94 n n C1 H11 EDO sing 95 n n C1 H12 EDO sing 96 n n O1 HO1 EDO sing 97 n n C2 O2 EDO sing 98 n n C2 H21 EDO sing 99 n n C2 H22 EDO sing 100 n n O2 HO2 EDO sing 101 n n # _atom_sites.entry_id 7S6U _atom_sites.fract_transf_matrix[1][1] 0.006395 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.001189 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025304 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016246 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FB8 A 1 401 600 FB8 DRG . C 3 EDO A 1 402 1 EDO EDO . D 3 EDO A 1 403 2 EDO EDO . E 3 EDO A 1 404 3 EDO EDO . F 4 CAC A 1 405 1 CAC CAC . G 5 HOH A 1 501 93 HOH HOH . G 5 HOH A 2 502 50 HOH HOH . G 5 HOH A 3 503 100 HOH HOH . G 5 HOH A 4 504 173 HOH HOH . G 5 HOH A 5 505 86 HOH HOH . G 5 HOH A 6 506 194 HOH HOH . G 5 HOH A 7 507 135 HOH HOH . G 5 HOH A 8 508 91 HOH HOH . G 5 HOH A 9 509 15 HOH HOH . G 5 HOH A 10 510 157 HOH HOH . G 5 HOH A 11 511 140 HOH HOH . G 5 HOH A 12 512 85 HOH HOH . G 5 HOH A 13 513 68 HOH HOH . G 5 HOH A 14 514 138 HOH HOH . G 5 HOH A 15 515 179 HOH HOH . G 5 HOH A 16 516 60 HOH HOH . G 5 HOH A 17 517 211 HOH HOH . G 5 HOH A 18 518 92 HOH HOH . G 5 HOH A 19 519 190 HOH HOH . G 5 HOH A 20 520 75 HOH HOH . G 5 HOH A 21 521 125 HOH HOH . G 5 HOH A 22 522 136 HOH HOH . G 5 HOH A 23 523 187 HOH HOH . G 5 HOH A 24 524 52 HOH HOH . G 5 HOH A 25 525 170 HOH HOH . G 5 HOH A 26 526 30 HOH HOH . G 5 HOH A 27 527 21 HOH HOH . G 5 HOH A 28 528 116 HOH HOH . G 5 HOH A 29 529 12 HOH HOH . G 5 HOH A 30 530 144 HOH HOH . G 5 HOH A 31 531 233 HOH HOH . G 5 HOH A 32 532 146 HOH HOH . G 5 HOH A 33 533 80 HOH HOH . G 5 HOH A 34 534 42 HOH HOH . G 5 HOH A 35 535 167 HOH HOH . G 5 HOH A 36 536 45 HOH HOH . G 5 HOH A 37 537 74 HOH HOH . G 5 HOH A 38 538 5 HOH HOH . G 5 HOH A 39 539 199 HOH HOH . G 5 HOH A 40 540 67 HOH HOH . G 5 HOH A 41 541 122 HOH HOH . G 5 HOH A 42 542 119 HOH HOH . G 5 HOH A 43 543 120 HOH HOH . G 5 HOH A 44 544 132 HOH HOH . G 5 HOH A 45 545 79 HOH HOH . G 5 HOH A 46 546 35 HOH HOH . G 5 HOH A 47 547 200 HOH HOH . G 5 HOH A 48 548 151 HOH HOH . G 5 HOH A 49 549 88 HOH HOH . G 5 HOH A 50 550 10 HOH HOH . G 5 HOH A 51 551 17 HOH HOH . G 5 HOH A 52 552 41 HOH HOH . G 5 HOH A 53 553 32 HOH HOH . G 5 HOH A 54 554 204 HOH HOH . G 5 HOH A 55 555 230 HOH HOH . G 5 HOH A 56 556 98 HOH HOH . G 5 HOH A 57 557 195 HOH HOH . G 5 HOH A 58 558 39 HOH HOH . G 5 HOH A 59 559 44 HOH HOH . G 5 HOH A 60 560 201 HOH HOH . G 5 HOH A 61 561 106 HOH HOH . G 5 HOH A 62 562 215 HOH HOH . G 5 HOH A 63 563 9 HOH HOH . G 5 HOH A 64 564 3 HOH HOH . G 5 HOH A 65 565 64 HOH HOH . G 5 HOH A 66 566 202 HOH HOH . G 5 HOH A 67 567 78 HOH HOH . G 5 HOH A 68 568 193 HOH HOH . G 5 HOH A 69 569 19 HOH HOH . G 5 HOH A 70 570 81 HOH HOH . G 5 HOH A 71 571 184 HOH HOH . G 5 HOH A 72 572 23 HOH HOH . G 5 HOH A 73 573 7 HOH HOH . G 5 HOH A 74 574 232 HOH HOH . G 5 HOH A 75 575 28 HOH HOH . G 5 HOH A 76 576 198 HOH HOH . G 5 HOH A 77 577 123 HOH HOH . G 5 HOH A 78 578 213 HOH HOH . G 5 HOH A 79 579 27 HOH HOH . G 5 HOH A 80 580 36 HOH HOH . G 5 HOH A 81 581 66 HOH HOH . G 5 HOH A 82 582 231 HOH HOH . G 5 HOH A 83 583 58 HOH HOH . G 5 HOH A 84 584 115 HOH HOH . G 5 HOH A 85 585 48 HOH HOH . G 5 HOH A 86 586 196 HOH HOH . G 5 HOH A 87 587 24 HOH HOH . G 5 HOH A 88 588 214 HOH HOH . G 5 HOH A 89 589 22 HOH HOH . G 5 HOH A 90 590 188 HOH HOH . G 5 HOH A 91 591 51 HOH HOH . G 5 HOH A 92 592 90 HOH HOH . G 5 HOH A 93 593 57 HOH HOH . G 5 HOH A 94 594 33 HOH HOH . G 5 HOH A 95 595 73 HOH HOH . G 5 HOH A 96 596 4 HOH HOH . G 5 HOH A 97 597 113 HOH HOH . G 5 HOH A 98 598 65 HOH HOH . G 5 HOH A 99 599 25 HOH HOH . G 5 HOH A 100 600 145 HOH HOH . G 5 HOH A 101 601 29 HOH HOH . G 5 HOH A 102 602 18 HOH HOH . G 5 HOH A 103 603 62 HOH HOH . G 5 HOH A 104 604 130 HOH HOH . G 5 HOH A 105 605 20 HOH HOH . G 5 HOH A 106 606 31 HOH HOH . G 5 HOH A 107 607 191 HOH HOH . G 5 HOH A 108 608 40 HOH HOH . G 5 HOH A 109 609 148 HOH HOH . G 5 HOH A 110 610 183 HOH HOH . G 5 HOH A 111 611 26 HOH HOH . G 5 HOH A 112 612 43 HOH HOH . G 5 HOH A 113 613 155 HOH HOH . G 5 HOH A 114 614 147 HOH HOH . G 5 HOH A 115 615 161 HOH HOH . G 5 HOH A 116 616 83 HOH HOH . G 5 HOH A 117 617 69 HOH HOH . G 5 HOH A 118 618 72 HOH HOH . G 5 HOH A 119 619 217 HOH HOH . G 5 HOH A 120 620 63 HOH HOH . G 5 HOH A 121 621 124 HOH HOH . G 5 HOH A 122 622 104 HOH HOH . G 5 HOH A 123 623 171 HOH HOH . G 5 HOH A 124 624 169 HOH HOH . G 5 HOH A 125 625 107 HOH HOH . G 5 HOH A 126 626 207 HOH HOH . G 5 HOH A 127 627 210 HOH HOH . G 5 HOH A 128 628 149 HOH HOH . G 5 HOH A 129 629 222 HOH HOH . G 5 HOH A 130 630 212 HOH HOH . G 5 HOH A 131 631 127 HOH HOH . G 5 HOH A 132 632 77 HOH HOH . G 5 HOH A 133 633 152 HOH HOH . G 5 HOH A 134 634 87 HOH HOH . G 5 HOH A 135 635 227 HOH HOH . G 5 HOH A 136 636 121 HOH HOH . G 5 HOH A 137 637 218 HOH HOH . G 5 HOH A 138 638 34 HOH HOH . G 5 HOH A 139 639 223 HOH HOH . G 5 HOH A 140 640 178 HOH HOH . G 5 HOH A 141 641 180 HOH HOH . G 5 HOH A 142 642 126 HOH HOH . G 5 HOH A 143 643 49 HOH HOH . G 5 HOH A 144 644 11 HOH HOH . G 5 HOH A 145 645 163 HOH HOH . G 5 HOH A 146 646 182 HOH HOH . G 5 HOH A 147 647 234 HOH HOH . G 5 HOH A 148 648 235 HOH HOH . G 5 HOH A 149 649 97 HOH HOH . G 5 HOH A 150 650 221 HOH HOH . G 5 HOH A 151 651 197 HOH HOH . G 5 HOH A 152 652 176 HOH HOH . G 5 HOH A 153 653 225 HOH HOH . G 5 HOH A 154 654 141 HOH HOH . G 5 HOH A 155 655 189 HOH HOH . G 5 HOH A 156 656 226 HOH HOH . G 5 HOH A 157 657 165 HOH HOH . G 5 HOH A 158 658 220 HOH HOH . G 5 HOH A 159 659 181 HOH HOH . G 5 HOH A 160 660 186 HOH HOH . G 5 HOH A 161 661 177 HOH HOH . G 5 HOH A 162 662 224 HOH HOH . G 5 HOH A 163 663 134 HOH HOH . G 5 HOH A 164 664 219 HOH HOH . G 5 HOH A 165 665 114 HOH HOH . G 5 HOH A 166 666 229 HOH HOH . G 5 HOH A 167 667 154 HOH HOH . G 5 HOH A 168 668 117 HOH HOH . G 5 HOH A 169 669 192 HOH HOH . G 5 HOH A 170 670 143 HOH HOH . G 5 HOH A 171 671 185 HOH HOH . G 5 HOH A 172 672 118 HOH HOH . G 5 HOH A 173 673 208 HOH HOH . G 5 HOH A 174 674 216 HOH HOH . G 5 HOH A 175 675 174 HOH HOH . G 5 HOH A 176 676 203 HOH HOH . G 5 HOH A 177 677 71 HOH HOH . G 5 HOH A 178 678 142 HOH HOH . G 5 HOH A 179 679 103 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . D 3 45.667 29.069 54.495 1 58.2 ? C1 EDO 403 A 1 HETATM 2 O O1 EDO . . . D 3 46.672 28.154 54.879 1 49 ? O1 EDO 403 A 1 HETATM 3 C C2 EDO . . . D 3 46.134 30.351 53.933 1 60.74 ? C2 EDO 403 A 1 HETATM 4 O O2 EDO . . . D 3 45.049 31.024 53.318 1 67.03 ? O2 EDO 403 A 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 297 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #