data_7S7M # _model_server_result.job_id -iYN-DKoYeZYqKqRb7ndiA _model_server_result.datetime_utc '2025-02-05 14:42:16' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s7m # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":305}' # _entry.id 7S7M # _exptl.entry_id 7S7M _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 65.409 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ZINC ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7S7M _cell.length_a 69.28 _cell.length_b 69.28 _cell.length_c 318.98 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S7M _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall 'P 65 2 (x,y,z+1/12)' _symmetry.space_group_name_H-M 'P 65 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 B SG CYS 1 B CYS 1 1_555 B SG CYS 70 B CYS 70 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? disulf ? disulf2 B SG CYS 3 B CYS 3 1_555 B SG CYS 99 B CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.042 ? disulf ? disulf3 B SG CYS 13 B CYS 13 1_555 B SG CYS 124 B CYS 124 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.039 ? disulf ? disulf4 B SG CYS 127 B CYS 127 1_555 B SG CYS 174 B CYS 174 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? disulf ? disulf5 B SG CYS 132 B CYS 132 1_555 B SG CYS 137 B CYS 137 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? disulf ? disulf6 B SG CYS 145 B CYS 145 1_555 B SG CYS 166 B CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? metalc ? metalc1 A OD1 ASP 25 A ASP 107 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.613 ? metalc ? metalc2 A OD2 ASP 25 A ASP 107 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.357 ? metalc ? metalc3 A O ASP 59 A ASP 141 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? metalc ? metalc4 A NE2 HIS 69 A HIS 151 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.136 ? metalc ? metalc5 A OD2 ASP 71 A ASP 153 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc6 A OD1 ASP 76 A ASP 158 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.521 ? metalc ? metalc7 A O GLY 77 A GLY 159 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc8 A O GLY 79 A GLY 161 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? metalc ? metalc9 A O VAL 81 A VAL 163 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.217 ? metalc ? metalc10 A NE2 HIS 84 A HIS 166 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? metalc ? metalc11 A O GLY 91 A GLY 173 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.201 ? metalc ? metalc12 A O ASN 93 A ASN 175 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc13 A OD1 ASP 95 A ASP 177 1_555 C CA CA . A CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc14 A ND1 HIS 97 A HIS 179 1_555 G ZN ZN . A ZN 305 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.892 ? metalc ? metalc15 A OD2 ASP 99 A ASP 181 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.321 ? metalc ? metalc16 A O ASP 100 A ASP 182 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.248 ? metalc ? metalc17 A OD1 ASP 100 A ASP 182 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.673 ? metalc ? metalc18 A O GLU 102 A GLU 184 1_555 D CA CA . A CA 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc19 A OE2 GLU 102 A GLU 184 1_555 E CA CA . A CA 303 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc20 A NE2 HIS 119 A HIS 201 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc21 A NE2 HIS 123 A HIS 205 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.195 ? metalc ? metalc22 A NE2 HIS 129 A HIS 211 1_555 F ZN ZN . A ZN 304 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.927 ? metalc ? metalc23 C CA CA . A CA 301 1_555 H O HOH . A HOH 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.53 ? metalc ? metalc24 C CA CA . A CA 301 1_555 H O HOH . A HOH 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.477 ? metalc ? metalc25 D CA CA . A CA 302 1_555 H O HOH . A HOH 410 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? metalc ? metalc26 F ZN ZN . A ZN 304 1_555 B N CYS 1 B CYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? metalc ? metalc27 F ZN ZN . A ZN 304 1_555 B O CYS 1 B CYS 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.324 ? # _chem_comp.formula 'Zn 2' _chem_comp.formula_weight 65.409 _chem_comp.id ZN _chem_comp.mon_nstd_flag . _chem_comp.name 'ZINC ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7S7M _atom_sites.fract_transf_matrix[1][1] 0.014434 _atom_sites.fract_transf_matrix[1][2] 0.008334 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016667 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.003135 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 CA A 1 301 301 CA CA . D 3 CA A 1 302 302 CA CA . E 3 CA A 1 303 303 CA CA . F 4 ZN A 1 304 304 ZN ZN . G 4 ZN A 1 305 305 ZN ZN . H 5 HOH A 1 401 401 HOH HOH . H 5 HOH A 2 402 402 HOH HOH . H 5 HOH A 3 403 403 HOH HOH . H 5 HOH A 4 404 404 HOH HOH . H 5 HOH A 5 405 405 HOH HOH . H 5 HOH A 6 406 406 HOH HOH . H 5 HOH A 7 407 407 HOH HOH . H 5 HOH A 8 408 408 HOH HOH . H 5 HOH A 9 409 409 HOH HOH . H 5 HOH A 10 410 410 HOH HOH . H 5 HOH A 11 411 411 HOH HOH . H 5 HOH A 12 412 412 HOH HOH . H 5 HOH A 13 413 413 HOH HOH . H 5 HOH A 14 414 414 HOH HOH . H 5 HOH A 15 415 415 HOH HOH . H 5 HOH A 16 416 416 HOH HOH . H 5 HOH A 17 417 417 HOH HOH . H 5 HOH A 18 418 418 HOH HOH . H 5 HOH A 19 419 419 HOH HOH . H 5 HOH A 20 420 420 HOH HOH . H 5 HOH A 21 421 421 HOH HOH . H 5 HOH A 22 422 422 HOH HOH . H 5 HOH A 23 423 423 HOH HOH . H 5 HOH A 24 424 424 HOH HOH . H 5 HOH A 25 425 425 HOH HOH . I 5 HOH B 1 201 201 HOH HOH . I 5 HOH B 2 202 202 HOH HOH . I 5 HOH B 3 203 203 HOH HOH . I 5 HOH B 4 204 204 HOH HOH . I 5 HOH B 5 205 205 HOH HOH . I 5 HOH B 6 206 206 HOH HOH . I 5 HOH B 7 207 207 HOH HOH . I 5 HOH B 8 208 208 HOH HOH . I 5 HOH B 9 209 209 HOH HOH . I 5 HOH B 10 210 210 HOH HOH . I 5 HOH B 11 211 211 HOH HOH . I 5 HOH B 12 212 212 HOH HOH . I 5 HOH B 13 213 213 HOH HOH . I 5 HOH B 14 214 214 HOH HOH . I 5 HOH B 15 215 215 HOH HOH . I 5 HOH B 16 216 216 HOH HOH . I 5 HOH B 17 217 217 HOH HOH . I 5 HOH B 18 218 218 HOH HOH . I 5 HOH B 19 219 219 HOH HOH . I 5 HOH B 20 220 220 HOH HOH . I 5 HOH B 21 221 221 HOH HOH . I 5 HOH B 22 222 222 HOH HOH . I 5 HOH B 23 223 223 HOH HOH . I 5 HOH B 24 224 224 HOH HOH . I 5 HOH B 25 225 225 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol ZN _atom_site.label_atom_id ZN _atom_site.label_comp_id ZN _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id G _atom_site.label_entity_id 4 _atom_site.Cartn_x 20.848 _atom_site.Cartn_y 37.384 _atom_site.Cartn_z 180.338 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 58.27 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id ZN _atom_site.auth_comp_id ZN _atom_site.auth_seq_id 305 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 428 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 1 #