data_7S7Q # _model_server_result.job_id I7xLuR0E46XuN5VrrXmSLw _model_server_result.datetime_utc '2025-07-31 02:34:38' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s7q # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7S7Q # _exptl.entry_id 7S7Q _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 221.208 _entity.id 3 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 2-acetamido-2-deoxy-beta-D-glucopyranose _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S7Q _cell.length_a 73.712 _cell.length_b 73.712 _cell.length_c 332.241 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S7Q _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 C N N ? 3 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 8 A CYS 25 1_555 A SG CYS 25 A CYS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.027 ? disulf ? disulf2 A SG CYS 39 A CYS 56 1_555 A SG CYS 96 A CYS 113 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? disulf ? disulf3 A SG CYS 47 A CYS 64 1_555 A SG CYS 94 A CYS 111 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf4 A SG CYS 228 A CYS 245 1_555 A SG CYS 253 A CYS 270 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 A SG CYS 267 A CYS 284 1_555 A SG CYS 331 A CYS 348 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf6 A SG CYS 280 A CYS 297 1_555 A SG CYS 329 A CYS 346 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? disulf ? disulf7 B SG CYS 7 B CYS 31 1_555 B SG CYS 29 B CYS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? disulf ? disulf8 B SG CYS 43 B CYS 67 1_555 B SG CYS 114 B CYS 138 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? disulf ? disulf9 B SG CYS 57 B CYS 81 1_555 B SG CYS 112 B CYS 136 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf10 B SG CYS 155 B CYS 179 1_555 B SG CYS 187 B CYS 211 1_555 ? ? ? ? A ? ? ? ? ? ? ? 2.022 ? disulf ? disulf11 B SG CYS 155 B CYS 179 1_555 B SG CYS 187 B CYS 211 1_555 ? ? ? ? B ? ? ? ? ? ? ? 2.04 ? disulf ? disulf12 B SG CYS 201 B CYS 225 1_555 B SG CYS 262 B CYS 286 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? disulf ? disulf13 B SG CYS 212 B CYS 236 1_555 B SG CYS 260 B CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.013 ? covale ? covale1 A ND2 ASN 165 A ASN 182 1_555 C C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.448 ? covale ? covale2 B ND2 ASN 204 B ASN 228 1_555 I C1 NAG . B NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.454 ? metalc ? metalc1 A OE1 GLU 339 A GLU 356 1_555 G CD CD . A CD 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc2 G CD CD . A CD 405 5_454 B OD1 ASN 176 B ASN 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.641 ? metalc ? metalc3 G CD CD . A CD 405 5_454 B OE1 GLU 267 B GLU 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.695 ? metalc ? metalc4 G CD CD . A CD 405 5_454 B OE2 GLU 267 B GLU 291 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.627 ? metalc ? metalc5 B NE2 HIS 18 B HIS 42 1_555 J CD CD . B CD 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.306 ? metalc ? metalc6 B NE2 HIS 192 B HIS 216 1_555 J CD CD . B CD 402 7_565 ? ? ? ? ? ? ? ? ? ? ? ? 2.512 ? # _chem_comp.formula 'C8 H15 N O6' _chem_comp.formula_weight 221.208 _chem_comp.id NAG _chem_comp.mon_nstd_flag . _chem_comp.name 2-acetamido-2-deoxy-beta-D-glucopyranose _chem_comp.type 'd-saccharide, beta linking' _chem_comp.pdbx_synonyms N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 NAG sing 235 n n C1 O1 NAG sing 236 n n C1 O5 NAG sing 237 n n C1 H1 NAG sing 238 n n C2 C3 NAG sing 239 n n C2 N2 NAG sing 240 n n C2 H2 NAG sing 241 n n C3 C4 NAG sing 242 n n C3 O3 NAG sing 243 n n C3 H3 NAG sing 244 n n C4 C5 NAG sing 245 n n C4 O4 NAG sing 246 n n C4 H4 NAG sing 247 n n C5 C6 NAG sing 248 n n C5 O5 NAG sing 249 n n C5 H5 NAG sing 250 n n C6 O6 NAG sing 251 n n C6 H61 NAG sing 252 n n C6 H62 NAG sing 253 n n C7 C8 NAG sing 254 n n C7 N2 NAG sing 255 n n C7 O7 NAG doub 256 n n C8 H81 NAG sing 257 n n C8 H82 NAG sing 258 n n C8 H83 NAG sing 259 n n N2 HN2 NAG sing 260 n n O1 HO1 NAG sing 261 n n O3 HO3 NAG sing 262 n n O4 HO4 NAG sing 263 n n O6 HO6 NAG sing 264 n n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.identifier _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 # _atom_sites.entry_id 7S7Q _atom_sites.fract_transf_matrix[1][1] 0.013566 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013566 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 NAG A 1 401 369 NAG NAG . D 4 CD A 1 402 7 CD CD . E 4 CD A 1 403 8 CD CD . F 4 CD A 1 404 9 CD CD . G 4 CD A 1 405 10 CD CD . H 4 CD A 1 406 12 CD CD . I 3 NAG B 1 401 305 NAG NAG . J 4 CD B 1 402 11 CD CD . K 4 CD B 1 403 13 CD CD . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 NAG . . . C 3 5.42 0.858 -46.583 1 144.62 ? C1 NAG 401 A 1 HETATM 2 C C2 NAG . . . C 3 5.767 1.986 -47.574 1 156.03 ? C2 NAG 401 A 1 HETATM 3 C C3 NAG . . . C 3 4.823 1.949 -48.776 1 156.71 ? C3 NAG 401 A 1 HETATM 4 C C4 NAG . . . C 3 4.837 0.567 -49.416 1 159.25 ? C4 NAG 401 A 1 HETATM 5 C C5 NAG . . . C 3 4.478 -0.485 -48.372 1 159.97 ? C5 NAG 401 A 1 HETATM 6 C C6 NAG . . . C 3 4.538 -1.897 -48.91 1 167.09 ? C6 NAG 401 A 1 HETATM 7 C C7 NAG . . . C 3 6.807 3.967 -46.549 1 160.38 ? C7 NAG 401 A 1 HETATM 8 C C8 NAG . . . C 3 6.561 5.293 -45.89 1 156.77 ? C8 NAG 401 A 1 HETATM 9 N N2 NAG . . . C 3 5.716 3.288 -46.925 1 160.94 ? N2 NAG 401 A 1 HETATM 10 O O3 NAG . . . C 3 5.213 2.934 -49.726 1 154.59 ? O3 NAG 401 A 1 HETATM 11 O O4 NAG . . . C 3 3.908 0.51 -50.493 1 157.37 ? O4 NAG 401 A 1 HETATM 12 O O5 NAG . . . C 3 5.405 -0.415 -47.277 1 155.12 ? O5 NAG 401 A 1 HETATM 13 O O6 NAG . . . C 3 4.101 -2.847 -47.946 1 166.68 ? O6 NAG 401 A 1 HETATM 14 O O7 NAG . . . C 3 7.94 3.531 -46.731 1 162.57 ? O7 NAG 401 A 1 # _model_server_stats.io_time_ms 16 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 302 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 14 #