data_7S86
#
_model_server_result.job_id            MKeAQyvzSvLFwcB6sq3L8Q 
_model_server_result.datetime_utc      '2024-10-10 08:20:48' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7s86 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":103}' 
#
_entry.id    7S86 
#
_exptl.entry_id    7S86 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              22.99 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'SODIUM ION' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7S86 
_cell.length_a            49.18 
_cell.length_b            96.29 
_cell.length_c            37.87 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7S86 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        20 
_symmetry.space_group_name_Hall    'C 2c 2' 
_symmetry.space_group_name_H-M     'C 2 2 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 16 A CYS 16 1_555 A SG CYS 78 A CYS 78 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.026 ? 
disulf ? disulf2 A SG CYS 23 A CYS 23 1_555 A SG CYS 72 A CYS 72 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf3 A SG CYS 24 A CYS 24 1_555 A SG CYS 59 A CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf4 A SG CYS 79 A CYS 79 1_555 A SG CYS 92 A CYS 92 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.041 ? 
metalc ? metalc1 A OG SER 18 A SER 18 1_555 D NA NA . A NA 103 6_445 ? ? ? ? ? ? ? ? ? ? ? ? 3.1 ? 
#
_chem_comp.formula           'Na 1' 
_chem_comp.formula_weight    22.99 
_chem_comp.id                NA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'SODIUM ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     7S86 
_atom_sites.fract_transf_matrix[1][1]    0.020333 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010385 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.026406 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EDO A 1 101 101 EDO EDO . 
C 2 EDO A 1 102 201 EDO EDO . 
D 3 NA A 1 103 1 NA NA . 
E 4 HOH A 1 201 58 HOH HOH . 
E 4 HOH A 2 202 57 HOH HOH . 
E 4 HOH A 3 203 1 HOH HOH . 
E 4 HOH A 4 204 61 HOH HOH . 
E 4 HOH A 5 205 11 HOH HOH . 
E 4 HOH A 6 206 12 HOH HOH . 
E 4 HOH A 7 207 3 HOH HOH . 
E 4 HOH A 8 208 6 HOH HOH . 
E 4 HOH A 9 209 5 HOH HOH . 
E 4 HOH A 10 210 4 HOH HOH . 
E 4 HOH A 11 211 17 HOH HOH . 
E 4 HOH A 12 212 13 HOH HOH . 
E 4 HOH A 13 213 18 HOH HOH . 
E 4 HOH A 14 214 36 HOH HOH . 
E 4 HOH A 15 215 2 HOH HOH . 
E 4 HOH A 16 216 20 HOH HOH . 
E 4 HOH A 17 217 26 HOH HOH . 
E 4 HOH A 18 218 51 HOH HOH . 
E 4 HOH A 19 219 16 HOH HOH . 
E 4 HOH A 20 220 56 HOH HOH . 
E 4 HOH A 21 221 35 HOH HOH . 
E 4 HOH A 22 222 9 HOH HOH . 
E 4 HOH A 23 223 45 HOH HOH . 
E 4 HOH A 24 224 43 HOH HOH . 
E 4 HOH A 25 225 28 HOH HOH . 
E 4 HOH A 26 226 8 HOH HOH . 
E 4 HOH A 27 227 29 HOH HOH . 
E 4 HOH A 28 228 49 HOH HOH . 
E 4 HOH A 29 229 19 HOH HOH . 
E 4 HOH A 30 230 59 HOH HOH . 
E 4 HOH A 31 231 23 HOH HOH . 
E 4 HOH A 32 232 41 HOH HOH . 
E 4 HOH A 33 233 24 HOH HOH . 
E 4 HOH A 34 234 50 HOH HOH . 
E 4 HOH A 35 235 38 HOH HOH . 
E 4 HOH A 36 236 60 HOH HOH . 
E 4 HOH A 37 237 44 HOH HOH . 
E 4 HOH A 38 238 46 HOH HOH . 
E 4 HOH A 39 239 33 HOH HOH . 
E 4 HOH A 40 240 34 HOH HOH . 
E 4 HOH A 41 241 39 HOH HOH . 
E 4 HOH A 42 242 47 HOH HOH . 
E 4 HOH A 43 243 37 HOH HOH . 
E 4 HOH A 44 244 30 HOH HOH . 
E 4 HOH A 45 245 52 HOH HOH . 
E 4 HOH A 46 246 32 HOH HOH . 
E 4 HOH A 47 247 31 HOH HOH . 
E 4 HOH A 48 248 55 HOH HOH . 
E 4 HOH A 49 249 10 HOH HOH . 
E 4 HOH A 50 250 54 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           NA 
_atom_site.label_atom_id         NA 
_atom_site.label_comp_id         NA 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -7.381 
_atom_site.Cartn_y               -28.187 
_atom_site.Cartn_z               -7.361 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        40.5 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          NA 
_atom_site.auth_comp_id          NA 
_atom_site.auth_seq_id           103 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              33 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    2 
_model_server_stats.query_time_ms           256 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           1 
#