data_7S87
#
_model_server_result.job_id            lnwLOPfIl-Hp7FfwJyLRqg 
_model_server_result.datetime_utc      '2025-01-10 21:03:31' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7s87 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":602}' 
#
_entry.id    7S87 
#
_exptl.entry_id    7S87 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              456.344 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'FLAVIN MONONUCLEOTIDE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7S87 
_cell.length_a            124.726 
_cell.length_b            161.093 
_cell.length_c            92.569 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7S87 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        21 
_symmetry.space_group_name_Hall    'C 2 2' 
_symmetry.space_group_name_H-M     'C 2 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 L N N 
#
_chem_comp.formula           'C17 H21 N4 O9 P' 
_chem_comp.formula_weight    456.344 
_chem_comp.id                FMN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'FLAVIN MONONUCLEOTIDE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'RIBOFLAVIN MONOPHOSPHATE' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N1 C2 FMN sing 134 n n 
N1 C10 FMN doub 135 n n 
C2 O2 FMN doub 136 n n 
C2 N3 FMN sing 137 n n 
N3 C4 FMN sing 138 n n 
N3 HN3 FMN sing 139 n n 
C4 O4 FMN doub 140 n n 
C4 C4A FMN sing 141 n n 
C4A N5 FMN doub 142 n n 
C4A C10 FMN sing 143 n n 
N5 C5A FMN sing 144 n n 
C5A C6 FMN doub 145 n y 
C5A C9A FMN sing 146 n y 
C6 C7 FMN sing 147 n y 
C6 H6 FMN sing 148 n n 
C7 C7M FMN sing 149 n n 
C7 C8 FMN doub 150 n y 
C7M HM71 FMN sing 151 n n 
C7M HM72 FMN sing 152 n n 
C7M HM73 FMN sing 153 n n 
C8 C8M FMN sing 154 n n 
C8 C9 FMN sing 155 n y 
C8M HM81 FMN sing 156 n n 
C8M HM82 FMN sing 157 n n 
C8M HM83 FMN sing 158 n n 
C9 C9A FMN doub 159 n y 
C9 H9 FMN sing 160 n n 
C9A N10 FMN sing 161 n n 
N10 C10 FMN sing 162 n n 
N10 C1' FMN sing 163 n n 
C1' C2' FMN sing 164 n n 
C1' "H1'1" FMN sing 165 n n 
C1' "H1'2" FMN sing 166 n n 
C2' O2' FMN sing 167 n n 
C2' C3' FMN sing 168 n n 
C2' H2' FMN sing 169 n n 
O2' HO2' FMN sing 170 n n 
C3' O3' FMN sing 171 n n 
C3' C4' FMN sing 172 n n 
C3' H3' FMN sing 173 n n 
O3' HO3' FMN sing 174 n n 
C4' O4' FMN sing 175 n n 
C4' C5' FMN sing 176 n n 
C4' H4' FMN sing 177 n n 
O4' HO4' FMN sing 178 n n 
C5' O5' FMN sing 179 n n 
C5' "H5'1" FMN sing 180 n n 
C5' "H5'2" FMN sing 181 n n 
O5' P FMN sing 182 n n 
P O1P FMN doub 183 n n 
P O2P FMN sing 184 n n 
P O3P FMN sing 185 n n 
O2P HOP2 FMN sing 186 n n 
O3P HOP3 FMN sing 187 n n 
#
_atom_sites.entry_id                     7S87 
_atom_sites.fract_transf_matrix[1][1]    0.008018 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.006208 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.010803 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 8IE A 1 601 571 8IE LIG . 
D 3 FMN A 1 602 573 FMN FMN . 
E 4 ORO A 1 603 593 ORO ORO . 
F 5 ACT A 1 604 601 ACT ACT . 
G 6 P4K A 1 605 611 P4K P4K . 
H 7 SO4 A 1 606 701 SO4 SO4 . 
I 2 8IE A 1 607 556 8IE LIG . 
J 2 8IE B 1 601 556 8IE LIG . 
K 2 8IE B 1 602 571 8IE LIG . 
L 3 FMN B 1 603 573 FMN FMN . 
M 4 ORO B 1 604 593 ORO ORO . 
N 7 SO4 B 1 605 701 SO4 SO4 . 
O 8 HOH A 1 701 14 HOH HOH . 
O 8 HOH A 2 702 81 HOH HOH . 
O 8 HOH A 3 703 75 HOH HOH . 
O 8 HOH A 4 704 80 HOH HOH . 
O 8 HOH A 5 705 11 HOH HOH . 
O 8 HOH A 6 706 52 HOH HOH . 
O 8 HOH A 7 707 23 HOH HOH . 
O 8 HOH A 8 708 19 HOH HOH . 
O 8 HOH A 9 709 30 HOH HOH . 
O 8 HOH A 10 710 24 HOH HOH . 
O 8 HOH A 11 711 8 HOH HOH . 
O 8 HOH A 12 712 3 HOH HOH . 
O 8 HOH A 13 713 55 HOH HOH . 
O 8 HOH A 14 714 27 HOH HOH . 
O 8 HOH A 15 715 32 HOH HOH . 
O 8 HOH A 16 716 18 HOH HOH . 
O 8 HOH A 17 717 76 HOH HOH . 
O 8 HOH A 18 718 6 HOH HOH . 
O 8 HOH A 19 719 109 HOH HOH . 
O 8 HOH A 20 720 9 HOH HOH . 
O 8 HOH A 21 721 83 HOH HOH . 
O 8 HOH A 22 722 10 HOH HOH . 
O 8 HOH A 23 723 78 HOH HOH . 
O 8 HOH A 24 724 7 HOH HOH . 
O 8 HOH A 25 725 22 HOH HOH . 
O 8 HOH A 26 726 40 HOH HOH . 
O 8 HOH A 27 727 48 HOH HOH . 
O 8 HOH A 28 728 42 HOH HOH . 
O 8 HOH A 29 729 95 HOH HOH . 
O 8 HOH A 30 730 4 HOH HOH . 
O 8 HOH A 31 731 41 HOH HOH . 
O 8 HOH A 32 732 1 HOH HOH . 
O 8 HOH A 33 733 38 HOH HOH . 
O 8 HOH A 34 734 104 HOH HOH . 
O 8 HOH A 35 735 26 HOH HOH . 
O 8 HOH A 36 736 71 HOH HOH . 
O 8 HOH A 37 737 2 HOH HOH . 
O 8 HOH A 38 738 46 HOH HOH . 
O 8 HOH A 39 739 28 HOH HOH . 
O 8 HOH A 40 740 53 HOH HOH . 
O 8 HOH A 41 741 54 HOH HOH . 
O 8 HOH A 42 742 12 HOH HOH . 
O 8 HOH A 43 743 73 HOH HOH . 
O 8 HOH A 44 744 5 HOH HOH . 
O 8 HOH A 45 745 72 HOH HOH . 
O 8 HOH A 46 746 15 HOH HOH . 
O 8 HOH A 47 747 97 HOH HOH . 
O 8 HOH A 48 748 99 HOH HOH . 
O 8 HOH A 49 749 21 HOH HOH . 
O 8 HOH A 50 750 61 HOH HOH . 
O 8 HOH A 51 751 84 HOH HOH . 
O 8 HOH A 52 752 36 HOH HOH . 
O 8 HOH A 53 753 77 HOH HOH . 
O 8 HOH A 54 754 25 HOH HOH . 
O 8 HOH A 55 755 50 HOH HOH . 
O 8 HOH A 56 756 85 HOH HOH . 
O 8 HOH A 57 757 74 HOH HOH . 
O 8 HOH A 58 758 89 HOH HOH . 
O 8 HOH A 59 759 69 HOH HOH . 
O 8 HOH A 60 760 51 HOH HOH . 
P 8 HOH B 1 701 86 HOH HOH . 
P 8 HOH B 2 702 91 HOH HOH . 
P 8 HOH B 3 703 34 HOH HOH . 
P 8 HOH B 4 704 35 HOH HOH . 
P 8 HOH B 5 705 20 HOH HOH . 
P 8 HOH B 6 706 87 HOH HOH . 
P 8 HOH B 7 707 16 HOH HOH . 
P 8 HOH B 8 708 31 HOH HOH . 
P 8 HOH B 9 709 13 HOH HOH . 
P 8 HOH B 10 710 47 HOH HOH . 
P 8 HOH B 11 711 110 HOH HOH . 
P 8 HOH B 12 712 88 HOH HOH . 
P 8 HOH B 13 713 17 HOH HOH . 
P 8 HOH B 14 714 43 HOH HOH . 
P 8 HOH B 15 715 39 HOH HOH . 
P 8 HOH B 16 716 100 HOH HOH . 
P 8 HOH B 17 717 37 HOH HOH . 
P 8 HOH B 18 718 44 HOH HOH . 
P 8 HOH B 19 719 57 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N1 FMN . . . D 3 6.277 49.46 30.095 1 38 ? N1 FMN 602 A 1 
HETATM 2 C C2 FMN . . . D 3 4.996 49.507 29.58 1 38.47 ? C2 FMN 602 A 1 
HETATM 3 O O2 FMN . . . D 3 4.411 48.453 29.339 1 35.66 ? O2 FMN 602 A 1 
HETATM 4 N N3 FMN . . . D 3 4.379 50.718 29.327 1 36.9 ? N3 FMN 602 A 1 
HETATM 5 C C4 FMN . . . D 3 5.05 51.892 29.595 1 37.78 ? C4 FMN 602 A 1 
HETATM 6 O O4 FMN . . . D 3 4.495 52.964 29.357 1 29.44 ? O4 FMN 602 A 1 
HETATM 7 C C4A FMN . . . D 3 6.344 51.85 30.126 1 41.67 ? C4A FMN 602 A 1 
HETATM 8 N N5 FMN . . . D 3 7.032 53.018 30.404 1 42.92 ? N5 FMN 602 A 1 
HETATM 9 C C5A FMN . . . D 3 8.315 52.958 30.92 1 44.91 ? C5A FMN 602 A 1 
HETATM 10 C C6 FMN . . . D 3 8.999 54.136 31.199 1 37.03 ? C6 FMN 602 A 1 
HETATM 11 C C7 FMN . . . D 3 10.288 54.078 31.717 1 33.73 ? C7 FMN 602 A 1 
HETATM 12 C C7M FMN . . . D 3 11.027 55.344 32.008 1 32.18 ? C7M FMN 602 A 1 
HETATM 13 C C8 FMN . . . D 3 10.896 52.851 31.961 1 37.65 ? C8 FMN 602 A 1 
HETATM 14 C C8M FMN . . . D 3 12.286 52.8 32.522 1 31.93 ? C8M FMN 602 A 1 
HETATM 15 C C9 FMN . . . D 3 10.216 51.668 31.689 1 40.75 ? C9 FMN 602 A 1 
HETATM 16 C C9A FMN . . . D 3 8.925 51.721 31.168 1 47.97 ? C9A FMN 602 A 1 
HETATM 17 N N10 FMN . . . D 3 8.243 50.551 30.891 1 40.08 ? N10 FMN 602 A 1 
HETATM 18 C C10 FMN . . . D 3 6.957 50.62 30.377 1 35.72 ? C10 FMN 602 A 1 
HETATM 19 C C1' FMN . . . D 3 8.888 49.222 31.164 1 36.46 ? C1' FMN 602 A 1 
HETATM 20 C C2' FMN . . . D 3 9.719 48.765 29.97 1 31.22 ? C2' FMN 602 A 1 
HETATM 21 O O2' FMN . . . D 3 8.848 48.607 28.866 1 25.3 ? O2' FMN 602 A 1 
HETATM 22 C C3' FMN . . . D 3 10.439 47.449 30.266 1 27.16 ? C3' FMN 602 A 1 
HETATM 23 O O3' FMN . . . D 3 9.476 46.449 30.432 1 24.28 ? O3' FMN 602 A 1 
HETATM 24 C C4' FMN . . . D 3 11.285 47.505 31.538 1 38.02 ? C4' FMN 602 A 1 
HETATM 25 O O4' FMN . . . D 3 12.064 48.685 31.535 1 33.19 ? O4' FMN 602 A 1 
HETATM 26 C C5' FMN . . . D 3 12.208 46.289 31.708 1 36.84 ? C5' FMN 602 A 1 
HETATM 27 O O5' FMN . . . D 3 13.017 46.188 30.559 1 37.22 ? O5' FMN 602 A 1 
HETATM 28 P P FMN . . . D 3 14.569 46.647 30.566 1 41.19 ? P FMN 602 A 1 
HETATM 29 O O1P FMN . . . D 3 15.23 46.014 29.364 1 31.03 ? O1P FMN 602 A 1 
HETATM 30 O O2P FMN . . . D 3 14.63 48.149 30.416 1 22.17 ? O2P FMN 602 A 1 
HETATM 31 O O3P FMN . . . D 3 15.27 46.217 31.85 1 22.42 ? O3P FMN 602 A 1 
#
_model_server_stats.io_time_ms              25 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           31 
#