data_7S98 # _model_server_result.job_id lI6uHrpCSUZpIz8MUw7KFQ _model_server_result.datetime_utc '2025-02-01 22:44:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s98 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7S98 # _exptl.entry_id 7S98 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 149.153 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-METHYL-9H-PURIN-6-AMINE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S98 _cell.length_a 65.827 _cell.length_b 89.842 _cell.length_c 101.695 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S98 _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C6 H7 N5' _chem_comp.formula_weight 149.153 _chem_comp.id N6M _chem_comp.mon_nstd_flag . _chem_comp.name N-METHYL-9H-PURIN-6-AMINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'N6-METHYL ADENINE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N9 C8 N6M sing 224 n y N9 C4 N6M sing 225 n y C8 N7 N6M doub 226 n y N7 C5 N6M sing 227 n y C5 C6 N6M sing 228 n y C5 C4 N6M doub 229 n y C6 N6 N6M sing 230 n n C6 N1 N6M doub 231 n y N1 C2 N6M sing 232 n y C2 N3 N6M doub 233 n y N3 C4 N6M sing 234 n y N9 H9 N6M sing 235 n n C8 H8 N6M sing 236 n n N6 H6 N6M sing 237 n n N6 C11 N6M sing 238 n n C11 H111 N6M sing 239 n n C11 H112 N6M sing 240 n n C11 H113 N6M sing 241 n n C2 H2 N6M sing 242 n n # _atom_sites.entry_id 7S98 _atom_sites.fract_transf_matrix[1][1] 0.015191 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011131 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009833 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 N6M A 1 301 301 N6M N6M . C 3 HOH A 1 401 161 HOH HOH . C 3 HOH A 2 402 81 HOH HOH . C 3 HOH A 3 403 40 HOH HOH . C 3 HOH A 4 404 133 HOH HOH . C 3 HOH A 5 405 148 HOH HOH . C 3 HOH A 6 406 124 HOH HOH . C 3 HOH A 7 407 104 HOH HOH . C 3 HOH A 8 408 57 HOH HOH . C 3 HOH A 9 409 34 HOH HOH . C 3 HOH A 10 410 29 HOH HOH . C 3 HOH A 11 411 127 HOH HOH . C 3 HOH A 12 412 72 HOH HOH . C 3 HOH A 13 413 97 HOH HOH . C 3 HOH A 14 414 9 HOH HOH . C 3 HOH A 15 415 96 HOH HOH . C 3 HOH A 16 416 90 HOH HOH . C 3 HOH A 17 417 8 HOH HOH . C 3 HOH A 18 418 158 HOH HOH . C 3 HOH A 19 419 93 HOH HOH . C 3 HOH A 20 420 17 HOH HOH . C 3 HOH A 21 421 73 HOH HOH . C 3 HOH A 22 422 28 HOH HOH . C 3 HOH A 23 423 91 HOH HOH . C 3 HOH A 24 424 21 HOH HOH . C 3 HOH A 25 425 15 HOH HOH . C 3 HOH A 26 426 36 HOH HOH . C 3 HOH A 27 427 75 HOH HOH . C 3 HOH A 28 428 120 HOH HOH . C 3 HOH A 29 429 84 HOH HOH . C 3 HOH A 30 430 4 HOH HOH . C 3 HOH A 31 431 107 HOH HOH . C 3 HOH A 32 432 106 HOH HOH . C 3 HOH A 33 433 82 HOH HOH . C 3 HOH A 34 434 7 HOH HOH . C 3 HOH A 35 435 20 HOH HOH . C 3 HOH A 36 436 76 HOH HOH . C 3 HOH A 37 437 13 HOH HOH . C 3 HOH A 38 438 80 HOH HOH . C 3 HOH A 39 439 136 HOH HOH . C 3 HOH A 40 440 119 HOH HOH . C 3 HOH A 41 441 52 HOH HOH . C 3 HOH A 42 442 1 HOH HOH . C 3 HOH A 43 443 39 HOH HOH . C 3 HOH A 44 444 6 HOH HOH . C 3 HOH A 45 445 143 HOH HOH . C 3 HOH A 46 446 24 HOH HOH . C 3 HOH A 47 447 18 HOH HOH . C 3 HOH A 48 448 23 HOH HOH . C 3 HOH A 49 449 89 HOH HOH . C 3 HOH A 50 450 41 HOH HOH . C 3 HOH A 51 451 12 HOH HOH . C 3 HOH A 52 452 32 HOH HOH . C 3 HOH A 53 453 3 HOH HOH . C 3 HOH A 54 454 44 HOH HOH . C 3 HOH A 55 455 64 HOH HOH . C 3 HOH A 56 456 67 HOH HOH . C 3 HOH A 57 457 68 HOH HOH . C 3 HOH A 58 458 27 HOH HOH . C 3 HOH A 59 459 147 HOH HOH . C 3 HOH A 60 460 35 HOH HOH . C 3 HOH A 61 461 63 HOH HOH . C 3 HOH A 62 462 74 HOH HOH . C 3 HOH A 63 463 22 HOH HOH . C 3 HOH A 64 464 25 HOH HOH . C 3 HOH A 65 465 10 HOH HOH . C 3 HOH A 66 466 5 HOH HOH . C 3 HOH A 67 467 19 HOH HOH . C 3 HOH A 68 468 69 HOH HOH . C 3 HOH A 69 469 132 HOH HOH . C 3 HOH A 70 470 79 HOH HOH . C 3 HOH A 71 471 142 HOH HOH . C 3 HOH A 72 472 134 HOH HOH . C 3 HOH A 73 473 38 HOH HOH . C 3 HOH A 74 474 16 HOH HOH . C 3 HOH A 75 475 49 HOH HOH . C 3 HOH A 76 476 56 HOH HOH . C 3 HOH A 77 477 45 HOH HOH . C 3 HOH A 78 478 43 HOH HOH . C 3 HOH A 79 479 42 HOH HOH . C 3 HOH A 80 480 109 HOH HOH . C 3 HOH A 81 481 62 HOH HOH . C 3 HOH A 82 482 58 HOH HOH . C 3 HOH A 83 483 48 HOH HOH . C 3 HOH A 84 484 117 HOH HOH . C 3 HOH A 85 485 2 HOH HOH . C 3 HOH A 86 486 33 HOH HOH . C 3 HOH A 87 487 61 HOH HOH . C 3 HOH A 88 488 155 HOH HOH . C 3 HOH A 89 489 105 HOH HOH . C 3 HOH A 90 490 100 HOH HOH . C 3 HOH A 91 491 37 HOH HOH . C 3 HOH A 92 492 130 HOH HOH . C 3 HOH A 93 493 145 HOH HOH . C 3 HOH A 94 494 103 HOH HOH . C 3 HOH A 95 495 113 HOH HOH . C 3 HOH A 96 496 14 HOH HOH . C 3 HOH A 97 497 53 HOH HOH . C 3 HOH A 98 498 85 HOH HOH . C 3 HOH A 99 499 54 HOH HOH . C 3 HOH A 100 500 151 HOH HOH . C 3 HOH A 101 501 11 HOH HOH . C 3 HOH A 102 502 121 HOH HOH . C 3 HOH A 103 503 152 HOH HOH . C 3 HOH A 104 504 101 HOH HOH . C 3 HOH A 105 505 30 HOH HOH . C 3 HOH A 106 506 87 HOH HOH . C 3 HOH A 107 507 110 HOH HOH . C 3 HOH A 108 508 65 HOH HOH . C 3 HOH A 109 509 55 HOH HOH . C 3 HOH A 110 510 70 HOH HOH . C 3 HOH A 111 511 126 HOH HOH . C 3 HOH A 112 512 112 HOH HOH . C 3 HOH A 113 513 137 HOH HOH . C 3 HOH A 114 514 60 HOH HOH . C 3 HOH A 115 515 59 HOH HOH . C 3 HOH A 116 516 78 HOH HOH . C 3 HOH A 117 517 98 HOH HOH . C 3 HOH A 118 518 66 HOH HOH . C 3 HOH A 119 519 77 HOH HOH . C 3 HOH A 120 520 156 HOH HOH . C 3 HOH A 121 521 108 HOH HOH . C 3 HOH A 122 522 139 HOH HOH . C 3 HOH A 123 523 51 HOH HOH . C 3 HOH A 124 524 86 HOH HOH . C 3 HOH A 125 525 125 HOH HOH . C 3 HOH A 126 526 47 HOH HOH . C 3 HOH A 127 527 26 HOH HOH . C 3 HOH A 128 528 141 HOH HOH . C 3 HOH A 129 529 144 HOH HOH . C 3 HOH A 130 530 83 HOH HOH . C 3 HOH A 131 531 118 HOH HOH . C 3 HOH A 132 532 31 HOH HOH . C 3 HOH A 133 533 128 HOH HOH . C 3 HOH A 134 534 157 HOH HOH . C 3 HOH A 135 535 138 HOH HOH . C 3 HOH A 136 536 122 HOH HOH . C 3 HOH A 137 537 114 HOH HOH . C 3 HOH A 138 538 92 HOH HOH . C 3 HOH A 139 539 99 HOH HOH . C 3 HOH A 140 540 149 HOH HOH . C 3 HOH A 141 541 46 HOH HOH . C 3 HOH A 142 542 88 HOH HOH . C 3 HOH A 143 543 95 HOH HOH . C 3 HOH A 144 544 94 HOH HOH . C 3 HOH A 145 545 115 HOH HOH . C 3 HOH A 146 546 102 HOH HOH . C 3 HOH A 147 547 129 HOH HOH . C 3 HOH A 148 548 50 HOH HOH . C 3 HOH A 149 549 116 HOH HOH . C 3 HOH A 150 550 160 HOH HOH . C 3 HOH A 151 551 153 HOH HOH . C 3 HOH A 152 552 159 HOH HOH . C 3 HOH A 153 553 140 HOH HOH . C 3 HOH A 154 554 150 HOH HOH . C 3 HOH A 155 555 135 HOH HOH . C 3 HOH A 156 556 146 HOH HOH . C 3 HOH A 157 557 162 HOH HOH . C 3 HOH A 158 558 154 HOH HOH . C 3 HOH A 159 559 123 HOH HOH . C 3 HOH A 160 560 111 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C6 N6M . . . B 2 -32.426 10.354 -25.801 1 29.05 ? C6 N6M 301 A 1 HETATM 2 C C5 N6M . . . B 2 -31.358 10.825 -25.055 1 32.79 ? C5 N6M 301 A 1 HETATM 3 C C4 N6M . . . B 2 -30.088 10.709 -25.545 1 29.71 ? C4 N6M 301 A 1 HETATM 4 C C2 N6M . . . B 2 -30.931 9.684 -27.47 1 31.53 ? C2 N6M 301 A 1 HETATM 5 C C8 N6M . . . B 2 -29.978 11.642 -23.579 1 28.82 ? C8 N6M 301 A 1 HETATM 6 C C11 N6M . . . B 2 -34.193 11.021 -24.093 1 32.28 ? C11 N6M 301 A 1 HETATM 7 N N6 N6M . . . B 2 -33.792 10.512 -25.399 1 29.89 ? N6 N6M 301 A 1 HETATM 8 N N1 N6M . . . B 2 -32.227 9.782 -26.973 1 30.21 ? N1 N6M 301 A 1 HETATM 9 N N3 N6M . . . B 2 -29.857 10.122 -26.743 1 29.35 ? N3 N6M 301 A 1 HETATM 10 N N9 N6M . . . B 2 -29.244 11.198 -24.624 1 28.52 ? N9 N6M 301 A 1 HETATM 11 N N7 N6M . . . B 2 -31.306 11.459 -23.831 1 30.21 ? N7 N6M 301 A 1 HETATM 12 H H9 N6M . . . B 2 -28.387 11.225 -24.687 1 34.3 ? H9 N6M 301 A 1 HETATM 13 H H8 N6M . . . B 2 -29.629 12.016 -22.803 1 34.66 ? H8 N6M 301 A 1 HETATM 14 H H6 N6M . . . B 2 -34.409 10.294 -25.958 1 35.95 ? H6 N6M 301 A 1 HETATM 15 H H111 N6M . . . B 2 -35.161 11.009 -24.024 1 38.81 ? H111 N6M 301 A 1 HETATM 16 H H112 N6M . . . B 2 -33.873 11.931 -23.989 1 38.81 ? H112 N6M 301 A 1 HETATM 17 H H113 N6M . . . B 2 -33.813 10.463 -23.397 1 38.81 ? H113 N6M 301 A 1 HETATM 18 H H2 N6M . . . B 2 -30.792 9.314 -28.312 1 37.91 ? H2 N6M 301 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 18 #