data_7S9F # _model_server_result.job_id 3K9D1Ntgpmj-t22_jv0FIw _model_server_result.datetime_utc '2024-11-13 01:11:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7s9f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":301}' # _entry.id 7S9F # _exptl.entry_id 7S9F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 318.762 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-chloro-9-[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]-9H-purin-2-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7S9F _cell.length_a 70.28 _cell.length_b 89.668 _cell.length_c 97.948 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7S9F _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id metalc _struct_conn.details ? _struct_conn.id metalc1 _struct_conn.ptnr1_label_asym_id C _struct_conn.ptnr1_label_atom_id MG _struct_conn.ptnr1_label_comp_id MG _struct_conn.ptnr1_label_seq_id . _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id MG _struct_conn.ptnr1_auth_seq_id 302 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id E _struct_conn.ptnr2_label_atom_id O _struct_conn.ptnr2_label_comp_id HOH _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id HOH _struct_conn.ptnr2_auth_seq_id 498 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.995 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C14 H15 Cl N6 O' _chem_comp.formula_weight 318.762 _chem_comp.id 94M _chem_comp.mon_nstd_flag . _chem_comp.name 6-chloro-9-[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]-9H-purin-2-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms BIIB021 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 94M doub 1 n y N1 C6 94M sing 2 n y C2 N2 94M sing 3 n n C2 N3 94M sing 4 n y N3 C4 94M doub 5 n y C4 C5 94M sing 6 n y C4 N9 94M sing 7 n y C5 C6 94M doub 8 n y C5 N7 94M sing 9 n y C6 CL6 94M sing 10 n n N7 C8 94M doub 11 n y C8 N9 94M sing 12 n y N9 CAH 94M sing 13 n n CAA OAM 94M sing 14 n n CAB CAN 94M sing 15 n n CAC CAP 94M sing 16 n n CAF NAI 94M doub 17 n y CAF CAN 94M sing 18 n y CAH CAR 94M sing 19 n n NAI CAR 94M sing 20 n y OAM CAS 94M sing 21 n n CAN CAS 94M doub 22 n y CAP CAR 94M doub 23 n y CAP CAS 94M sing 24 n y N2 HN2 94M sing 25 n n N2 HN2A 94M sing 26 n n C8 H8 94M sing 27 n n CAA HAA 94M sing 28 n n CAA HAAA 94M sing 29 n n CAA HAAB 94M sing 30 n n CAB HAB 94M sing 31 n n CAB HABA 94M sing 32 n n CAB HABB 94M sing 33 n n CAC HAC 94M sing 34 n n CAC HACA 94M sing 35 n n CAC HACB 94M sing 36 n n CAF HAF 94M sing 37 n n CAH HAH 94M sing 38 n n CAH HAHA 94M sing 39 n n # _atom_sites.entry_id 7S9F _atom_sites.fract_transf_matrix[1][1] 0.014229 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011152 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010209 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 94M A 1 301 301 94M 94M . C 3 MG A 1 302 1 MG MG . D 3 MG A 1 303 2 MG MG . E 4 HOH A 1 401 77 HOH HOH . E 4 HOH A 2 402 59 HOH HOH . E 4 HOH A 3 403 46 HOH HOH . E 4 HOH A 4 404 100 HOH HOH . E 4 HOH A 5 405 68 HOH HOH . E 4 HOH A 6 406 51 HOH HOH . E 4 HOH A 7 407 50 HOH HOH . E 4 HOH A 8 408 39 HOH HOH . E 4 HOH A 9 409 73 HOH HOH . E 4 HOH A 10 410 2 HOH HOH . E 4 HOH A 11 411 62 HOH HOH . E 4 HOH A 12 412 19 HOH HOH . E 4 HOH A 13 413 94 HOH HOH . E 4 HOH A 14 414 49 HOH HOH . E 4 HOH A 15 415 92 HOH HOH . E 4 HOH A 16 416 41 HOH HOH . E 4 HOH A 17 417 45 HOH HOH . E 4 HOH A 18 418 23 HOH HOH . E 4 HOH A 19 419 14 HOH HOH . E 4 HOH A 20 420 34 HOH HOH . E 4 HOH A 21 421 71 HOH HOH . E 4 HOH A 22 422 15 HOH HOH . E 4 HOH A 23 423 63 HOH HOH . E 4 HOH A 24 424 56 HOH HOH . E 4 HOH A 25 425 6 HOH HOH . E 4 HOH A 26 426 9 HOH HOH . E 4 HOH A 27 427 5 HOH HOH . E 4 HOH A 28 428 72 HOH HOH . E 4 HOH A 29 429 1 HOH HOH . E 4 HOH A 30 430 12 HOH HOH . E 4 HOH A 31 431 10 HOH HOH . E 4 HOH A 32 432 88 HOH HOH . E 4 HOH A 33 433 27 HOH HOH . E 4 HOH A 34 434 97 HOH HOH . E 4 HOH A 35 435 36 HOH HOH . E 4 HOH A 36 436 3 HOH HOH . E 4 HOH A 37 437 66 HOH HOH . E 4 HOH A 38 438 16 HOH HOH . E 4 HOH A 39 439 20 HOH HOH . E 4 HOH A 40 440 35 HOH HOH . E 4 HOH A 41 441 64 HOH HOH . E 4 HOH A 42 442 26 HOH HOH . E 4 HOH A 43 443 43 HOH HOH . E 4 HOH A 44 444 25 HOH HOH . E 4 HOH A 45 445 22 HOH HOH . E 4 HOH A 46 446 32 HOH HOH . E 4 HOH A 47 447 28 HOH HOH . E 4 HOH A 48 448 21 HOH HOH . E 4 HOH A 49 449 31 HOH HOH . E 4 HOH A 50 450 80 HOH HOH . E 4 HOH A 51 451 4 HOH HOH . E 4 HOH A 52 452 84 HOH HOH . E 4 HOH A 53 453 75 HOH HOH . E 4 HOH A 54 454 13 HOH HOH . E 4 HOH A 55 455 65 HOH HOH . E 4 HOH A 56 456 74 HOH HOH . E 4 HOH A 57 457 79 HOH HOH . E 4 HOH A 58 458 70 HOH HOH . E 4 HOH A 59 459 47 HOH HOH . E 4 HOH A 60 460 17 HOH HOH . E 4 HOH A 61 461 24 HOH HOH . E 4 HOH A 62 462 38 HOH HOH . E 4 HOH A 63 463 61 HOH HOH . E 4 HOH A 64 464 7 HOH HOH . E 4 HOH A 65 465 44 HOH HOH . E 4 HOH A 66 466 29 HOH HOH . E 4 HOH A 67 467 81 HOH HOH . E 4 HOH A 68 468 30 HOH HOH . E 4 HOH A 69 469 52 HOH HOH . E 4 HOH A 70 470 83 HOH HOH . E 4 HOH A 71 471 48 HOH HOH . E 4 HOH A 72 472 8 HOH HOH . E 4 HOH A 73 473 101 HOH HOH . E 4 HOH A 74 474 86 HOH HOH . E 4 HOH A 75 475 18 HOH HOH . E 4 HOH A 76 476 40 HOH HOH . E 4 HOH A 77 477 82 HOH HOH . E 4 HOH A 78 478 76 HOH HOH . E 4 HOH A 79 479 33 HOH HOH . E 4 HOH A 80 480 67 HOH HOH . E 4 HOH A 81 481 54 HOH HOH . E 4 HOH A 82 482 95 HOH HOH . E 4 HOH A 83 483 99 HOH HOH . E 4 HOH A 84 484 102 HOH HOH . E 4 HOH A 85 485 37 HOH HOH . E 4 HOH A 86 486 11 HOH HOH . E 4 HOH A 87 487 55 HOH HOH . E 4 HOH A 88 488 78 HOH HOH . E 4 HOH A 89 489 93 HOH HOH . E 4 HOH A 90 490 53 HOH HOH . E 4 HOH A 91 491 87 HOH HOH . E 4 HOH A 92 492 57 HOH HOH . E 4 HOH A 93 493 58 HOH HOH . E 4 HOH A 94 494 96 HOH HOH . E 4 HOH A 95 495 89 HOH HOH . E 4 HOH A 96 496 85 HOH HOH . E 4 HOH A 97 497 42 HOH HOH . E 4 HOH A 98 498 98 HOH HOH . E 4 HOH A 99 499 69 HOH HOH . E 4 HOH A 100 500 91 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 94M . . . B 2 1.146 -33.941 23.138 1 36.43 ? N1 94M 301 A 1 HETATM 2 C C2 94M . . . B 2 0.901 -33.367 24.34 1 27.89 ? C2 94M 301 A 1 HETATM 3 N N2 94M . . . B 2 2.09 -32.737 24.888 1 34.29 ? N2 94M 301 A 1 HETATM 4 N N3 94M . . . B 2 -0.336 -33.426 24.878 1 24.22 ? N3 94M 301 A 1 HETATM 5 C C4 94M . . . B 2 -1.327 -34.058 24.221 1 30.51 ? C4 94M 301 A 1 HETATM 6 C C5 94M . . . B 2 -1.092 -34.627 23.037 1 27.85 ? C5 94M 301 A 1 HETATM 7 C C6 94M . . . B 2 0.17 -34.563 22.491 1 27.63 ? C6 94M 301 A 1 HETATM 8 CL CL6 94M . . . B 2 0.588 -35.28 20.914 1 28.27 ? CL6 94M 301 A 1 HETATM 9 N N7 94M . . . B 2 -2.236 -35.179 22.609 1 26.05 ? N7 94M 301 A 1 HETATM 10 C C8 94M . . . B 2 -3.177 -34.949 23.533 1 26.94 ? C8 94M 301 A 1 HETATM 11 N N9 94M . . . B 2 -2.618 -34.251 24.524 1 33.1 ? N9 94M 301 A 1 HETATM 12 C CAA 94M . . . B 2 -5.348 -29.303 22.827 1 33.27 ? CAA 94M 301 A 1 HETATM 13 C CAB 94M . . . B 2 -7.797 -30.341 24.584 1 26.79 ? CAB 94M 301 A 1 HETATM 14 C CAC 94M . . . B 2 -2.847 -31.037 24.715 1 28.07 ? CAC 94M 301 A 1 HETATM 15 C CAF 94M . . . B 2 -6.792 -32.522 25.336 1 34.59 ? CAF 94M 301 A 1 HETATM 16 C CAH 94M . . . B 2 -3.305 -33.81 25.719 1 27.05 ? CAH 94M 301 A 1 HETATM 17 N NAI 94M . . . B 2 -5.733 -33.317 25.594 1 29.01 ? NAI 94M 301 A 1 HETATM 18 O OAM 94M . . . B 2 -5.243 -29.455 24.212 1 35.53 ? OAM 94M 301 A 1 HETATM 19 C CAN 94M . . . B 2 -6.591 -31.231 24.871 1 34 ? CAN 94M 301 A 1 HETATM 20 C CAP 94M . . . B 2 -4.262 -31.573 24.939 1 32.91 ? CAP 94M 301 A 1 HETATM 21 C CAR 94M . . . B 2 -4.471 -32.871 25.397 1 28.28 ? CAR 94M 301 A 1 HETATM 22 C CAS 94M . . . B 2 -5.329 -30.774 24.676 1 33.51 ? CAS 94M 301 A 1 HETATM 23 H HN2 94M . . . B 2 2.318 -32.884 25.705 1 41.77 ? HN2 94M 301 A 1 HETATM 24 H HN2A 94M . . . B 2 2.565 -32.214 24.397 1 41.77 ? HN2A 94M 301 A 1 HETATM 25 H H8 94M . . . B 2 -4.064 -35.227 23.492 1 32.95 ? H8 94M 301 A 1 HETATM 26 H HAA 94M . . . B 2 -6.207 -28.908 22.609 1 40.54 ? HAA 94M 301 A 1 HETATM 27 H HAAA 94M . . . B 2 -5.274 -30.171 22.399 1 40.54 ? HAAA 94M 301 A 1 HETATM 28 H HAAB 94M . . . B 2 -4.637 -28.725 22.51 1 40.54 ? HAAB 94M 301 A 1 HETATM 29 H HAB 94M . . . B 2 -7.808 -30.104 23.644 1 32.76 ? HAB 94M 301 A 1 HETATM 30 H HABA 94M . . . B 2 -7.737 -29.534 25.12 1 32.76 ? HABA 94M 301 A 1 HETATM 31 H HABB 94M . . . B 2 -8.611 -30.818 24.808 1 32.76 ? HABB 94M 301 A 1 HETATM 32 H HAC 94M . . . B 2 -2.892 -30.109 24.438 1 34.3 ? HAC 94M 301 A 1 HETATM 33 H HACA 94M . . . B 2 -2.409 -31.559 24.024 1 34.3 ? HACA 94M 301 A 1 HETATM 34 H HACB 94M . . . B 2 -2.341 -31.104 25.54 1 34.3 ? HACB 94M 301 A 1 HETATM 35 H HAF 94M . . . B 2 -7.656 -32.839 25.471 1 42.12 ? HAF 94M 301 A 1 HETATM 36 H HAH 94M . . . B 2 -2.674 -33.343 26.289 1 33.08 ? HAH 94M 301 A 1 HETATM 37 H HAHA 94M . . . B 2 -3.649 -34.587 26.188 1 33.08 ? HAHA 94M 301 A 1 # _model_server_stats.io_time_ms 70 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 10 _model_server_stats.element_count 37 #