data_7SCB # _model_server_result.job_id 50Csuf3116jwmZTSKlF-jQ _model_server_result.datetime_utc '2025-03-06 09:20:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7scb # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"DA","auth_seq_id":200}' # _entry.id 7SCB # _exptl.entry_id 7SCB _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 588.694 _entity.id 10 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PHYCOCYANOBILIN _entity.pdbx_number_of_molecules 24 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SCB _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SCB _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 29-meric _pdbx_struct_assembly.oligomeric_count 29 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 10 DA N N ? 10 EA N N ? 10 FA N N ? 10 GA N N ? 10 HA N N ? 10 IA N N ? 10 JA N N ? 10 KA N N ? 10 LA N N ? 10 MA N N ? 10 NA N N ? 10 OA N N ? 10 PA N N ? 10 QA N N ? 10 RA N N ? 10 SA N N ? 10 TA N N ? 10 UA N N ? 10 VA N N ? 10 WA N N ? 10 XA N N ? 10 YA N N ? 10 ZA N N ? 10 AB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 81 AA CYS 81 1_555 DA CAC CYC . AA CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale2 B SG CYS 81 AB CYS 81 1_555 EA CAC CYC . AB CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? covale ? covale3 C SG CYS 81 AC CYS 81 1_555 FA CAC CYC . AC CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale4 D SG CYS 81 AD CYS 81 1_555 GA CAC CYC . AD CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale5 E SG CYS 81 AE CYS 81 1_555 HA CAC CYC . AE CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? covale ? covale6 F SG CYS 81 AF CYS 81 1_555 IA CAC CYC . AF CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale7 G SG CYS 81 AH CYS 81 1_555 JA CAC CYC . AH CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? covale ? covale8 H SG CYS 81 AI CYS 81 1_555 KA CAC CYC . AI CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? covale ? covale9 I SG CYS 81 AJ CYS 81 1_555 LA CAC CYC . AJ CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? covale ? covale10 J SG CYS 82 AK CYS 82 1_555 MA CAC CYC . AK CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale11 K SG CYS 81 AL CYS 81 1_555 NA CAC CYC . AL CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.846 ? covale ? covale12 L SG CYS 81 AN CYS 81 1_555 OA CAC CYC . AN CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale13 M SG CYS 81 AO CYS 81 1_555 PA CAC CYC . AO CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale14 N SG CYS 81 AP CYS 81 1_555 QA CAC CYC . AP CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? covale ? covale15 O SG CYS 81 AQ CYS 81 1_555 RA CAC CYC . AQ CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? covale ? covale16 P SG CYS 81 AR CYS 81 1_555 SA CAC CYC . AR CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale17 Q SG CYS 81 AS CYS 81 1_555 TA CAC CYC . AS CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale18 R SG CYS 81 AU CYS 81 1_555 UA CAC CYC . AU CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? covale ? covale19 S SG CYS 81 AV CYS 81 1_555 VA CAC CYC . AV CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale20 T SG CYS 81 AW CYS 81 1_555 WA CAC CYC . AW CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.842 ? covale ? covale21 U SG CYS 81 AX CYS 81 1_555 XA CAC CYC . AX CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? covale ? covale22 V SG CYS 81 AY CYS 81 1_555 YA CAC CYC . AY CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.841 ? covale ? covale23 W SG CYS 81 AZ CYS 81 1_555 ZA CAC CYC . AZ CYC 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? covale ? covale24 Z SG CYS 190 BE CYS 190 1_555 AB CAC CYC . BE CYC 1000 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.84 ? # _chem_comp.formula 'C33 H40 N4 O6' _chem_comp.formula_weight 588.694 _chem_comp.id CYC _chem_comp.mon_nstd_flag . _chem_comp.name PHYCOCYANOBILIN _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CHA C1A CYC doub 165 z n CHA C4D CYC sing 166 n n CHA HHA CYC sing 167 n n NA C1A CYC sing 168 n n NA C4A CYC doub 169 n n C1A C2A CYC sing 170 n n C2A C3A CYC doub 171 n n C2A CAA CYC sing 172 n n C3A C4A CYC sing 173 n n C3A CMA CYC sing 174 n n C4A CHB CYC sing 175 n n CMA HMA1 CYC sing 176 n n CMA HMA2 CYC sing 177 n n CMA HMA3 CYC sing 178 n n CAA CBA CYC sing 179 n n CAA HAA1 CYC sing 180 n n CAA HAA2 CYC sing 181 n n CBA CGA CYC sing 182 n n CBA HBA1 CYC sing 183 n n CBA HBA2 CYC sing 184 n n CGA O1A CYC doub 185 n n CGA O2A CYC sing 186 n n O2A H2A CYC sing 187 n n CHB C1B CYC doub 188 z n CHB HHB CYC sing 189 n n NB C1B CYC sing 190 n n NB C4B CYC sing 191 n n NB HB CYC sing 192 n n C1B C2B CYC sing 193 n n C2B C3B CYC doub 194 n n C2B CMB CYC sing 195 n n C3B C4B CYC sing 196 n n C3B CAB CYC sing 197 n n C4B OB CYC doub 198 n n CMB HMB1 CYC sing 199 n n CMB HMB2 CYC sing 200 n n CMB HMB3 CYC sing 201 n n CAB CBB CYC sing 202 n n CAB HAB1 CYC sing 203 n n CAB HAB2 CYC sing 204 n n CBB HBB1 CYC sing 205 n n CBB HBB2 CYC sing 206 n n CBB HBB3 CYC sing 207 n n NC C1C CYC sing 208 n n NC C4C CYC sing 209 n n NC HC CYC sing 210 n n C1C C2C CYC sing 211 n n C1C OC CYC doub 212 n n C2C C3C CYC sing 213 n n C2C CMC CYC sing 214 n n C2C H2C CYC sing 215 n n C3C C4C CYC sing 216 n n C3C CAC CYC sing 217 n n C3C H3C CYC sing 218 n n C4C CHD CYC doub 219 z n CMC HMC1 CYC sing 220 n n CMC HMC2 CYC sing 221 n n CMC HMC3 CYC sing 222 n n CAC CBC CYC sing 223 n n CAC HAC1 CYC sing 224 n n CAC HAC2 CYC sing 225 n n CBC HBC1 CYC sing 226 n n CBC HBC2 CYC sing 227 n n CBC HBC3 CYC sing 228 n n CHD C1D CYC sing 229 n n CHD HHD CYC sing 230 n n ND C1D CYC sing 231 n y ND C4D CYC sing 232 n y ND HD CYC sing 233 n n C1D C2D CYC doub 234 n y C2D C3D CYC sing 235 n y C2D CMD CYC sing 236 n n C3D C4D CYC doub 237 n y C3D CAD CYC sing 238 n n CMD HMD1 CYC sing 239 n n CMD HMD2 CYC sing 240 n n CMD HMD3 CYC sing 241 n n CAD CBD CYC sing 242 n n CAD HAD1 CYC sing 243 n n CAD HAD2 CYC sing 244 n n CBD CGD CYC sing 245 n n CBD HBD1 CYC sing 246 n n CBD HBD2 CYC sing 247 n n CGD O1D CYC doub 248 n n CGD O2D CYC sing 249 n n O2D H2D CYC sing 250 n n # _atom_sites.entry_id 7SCB _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code DA 10 CYC AA 1 200 200 CYC CYC . EA 10 CYC AB 1 200 200 CYC CYC . FA 10 CYC AC 1 200 200 CYC CYC . GA 10 CYC AD 1 200 200 CYC CYC . HA 10 CYC AE 1 200 200 CYC CYC . IA 10 CYC AF 1 200 200 CYC CYC . JA 10 CYC AH 1 200 200 CYC CYC . KA 10 CYC AI 1 200 200 CYC CYC . LA 10 CYC AJ 1 200 200 CYC CYC . MA 10 CYC AK 1 200 200 CYC CYC . NA 10 CYC AL 1 200 200 CYC CYC . OA 10 CYC AN 1 200 200 CYC CYC . PA 10 CYC AO 1 200 200 CYC CYC . QA 10 CYC AP 1 200 200 CYC CYC . RA 10 CYC AQ 1 200 200 CYC CYC . SA 10 CYC AR 1 200 200 CYC CYC . TA 10 CYC AS 1 200 200 CYC CYC . UA 10 CYC AU 1 200 200 CYC CYC . VA 10 CYC AV 1 200 200 CYC CYC . WA 10 CYC AW 1 200 200 CYC CYC . XA 10 CYC AX 1 200 200 CYC CYC . YA 10 CYC AY 1 200 200 CYC CYC . ZA 10 CYC AZ 1 200 200 CYC CYC . AB 10 CYC BE 1 1000 1000 CYC CYC . BB 11 45D BH 1 400 400 45D 45D . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CHA CYC . . . DA 10 228.41 162.482 146.097 1 110.69 ? CHA CYC 200 AA 1 HETATM 2 N NA CYC . . . DA 10 229.822 164.459 146.372 1 110.32 ? NA CYC 200 AA 1 HETATM 3 C C1A CYC . . . DA 10 229.55 163.235 145.832 1 110.42 ? C1A CYC 200 AA 1 HETATM 4 C C2A CYC . . . DA 10 230.621 162.843 144.928 1 110.32 ? C2A CYC 200 AA 1 HETATM 5 C C3A CYC . . . DA 10 231.332 163.98 144.69 1 110.26 ? C3A CYC 200 AA 1 HETATM 6 C C4A CYC . . . DA 10 230.748 165.018 145.536 1 110.24 ? C4A CYC 200 AA 1 HETATM 7 C CMA CYC . . . DA 10 232.473 164.138 143.722 1 110.26 ? CMA CYC 200 AA 1 HETATM 8 C CAA CYC . . . DA 10 230.833 161.464 144.368 1 110.32 ? CAA CYC 200 AA 1 HETATM 9 C CBA CYC . . . DA 10 231.329 160.438 145.393 1 110.43 ? CBA CYC 200 AA 1 HETATM 10 C CGA CYC . . . DA 10 232.78 160.024 145.21 1 110.46 ? CGA CYC 200 AA 1 HETATM 11 O O1A CYC . . . DA 10 233.552 160.149 146.181 1 110.59 ? O1A CYC 200 AA 1 HETATM 12 O O2A CYC . . . DA 10 233.132 159.574 144.102 1 110.36 ? O2A CYC 200 AA 1 HETATM 13 C CHB CYC . . . DA 10 231.033 166.363 145.49 1 110.14 ? CHB CYC 200 AA 1 HETATM 14 N NB CYC . . . DA 10 233.471 166.724 145.574 1 109.97 ? NB CYC 200 AA 1 HETATM 15 C C1B CYC . . . DA 10 232.146 167.085 145.79 1 109.97 ? C1B CYC 200 AA 1 HETATM 16 C C2B CYC . . . DA 10 232.15 168.378 146.369 1 109.89 ? C2B CYC 200 AA 1 HETATM 17 C C3B CYC . . . DA 10 233.299 168.985 145.969 1 109.89 ? C3B CYC 200 AA 1 HETATM 18 C C4B CYC . . . DA 10 234.212 167.887 145.498 1 109.92 ? C4B CYC 200 AA 1 HETATM 19 C CMB CYC . . . DA 10 231.09 169.017 147.219 1 109.81 ? CMB CYC 200 AA 1 HETATM 20 C CAB CYC . . . DA 10 233.67 170.437 145.944 1 109.87 ? CAB CYC 200 AA 1 HETATM 21 C CBB CYC . . . DA 10 234.856 170.767 146.842 1 109.97 ? CBB CYC 200 AA 1 HETATM 22 O OB CYC . . . DA 10 235.355 167.966 145.119 1 109.87 ? OB CYC 200 AA 1 HETATM 23 N NC CYC . . . DA 10 223.628 163.692 150.171 1 111.68 ? NC CYC 200 AA 1 HETATM 24 C C1C CYC . . . DA 10 222.607 163.9 151.06 1 111.8 ? C1C CYC 200 AA 1 HETATM 25 C C2C CYC . . . DA 10 222.991 165.028 151.989 1 111.81 ? C2C CYC 200 AA 1 HETATM 26 C C3C CYC . . . DA 10 224.396 165.439 151.516 1 111.85 ? C3C CYC 200 AA 1 HETATM 27 C C4C CYC . . . DA 10 224.792 164.339 150.562 1 111.58 ? C4C CYC 200 AA 1 HETATM 28 C CMC CYC . . . DA 10 221.97 166.154 152.045 1 111.78 ? CMC CYC 200 AA 1 HETATM 29 C CAC CYC . . . DA 10 225.44 165.697 152.623 1 112.26 ? CAC CYC 200 AA 1 HETATM 30 C CBC CYC . . . DA 10 225.56 167.164 152.934 1 112.26 ? CBC CYC 200 AA 1 HETATM 31 O OC CYC . . . DA 10 221.559 163.272 151.095 1 111.97 ? OC CYC 200 AA 1 HETATM 32 C CHD CYC . . . DA 10 226.083 164.02 150.127 1 111.3 ? CHD CYC 200 AA 1 HETATM 33 N ND CYC . . . DA 10 227.354 163.514 148.065 1 111.02 ? ND CYC 200 AA 1 HETATM 34 C C1D CYC . . . DA 10 226.521 163.126 149.094 1 111.13 ? C1D CYC 200 AA 1 HETATM 35 C C2D CYC . . . DA 10 226.251 161.729 148.901 1 111.13 ? C2D CYC 200 AA 1 HETATM 36 C C3D CYC . . . DA 10 226.912 161.314 147.768 1 111.12 ? C3D CYC 200 AA 1 HETATM 37 C C4D CYC . . . DA 10 227.615 162.443 147.238 1 110.95 ? C4D CYC 200 AA 1 HETATM 38 C CMD CYC . . . DA 10 225.39 160.884 149.786 1 111.18 ? CMD CYC 200 AA 1 HETATM 39 C CAD CYC . . . DA 10 226.917 159.932 147.175 1 111.22 ? CAD CYC 200 AA 1 HETATM 40 C CBD CYC . . . DA 10 225.864 159.74 146.09 1 111.36 ? CBD CYC 200 AA 1 HETATM 41 C CGD CYC . . . DA 10 225.676 158.294 145.664 1 111.5 ? CGD CYC 200 AA 1 HETATM 42 O O1D CYC . . . DA 10 224.725 157.655 146.156 1 111.59 ? O1D CYC 200 AA 1 HETATM 43 O O2D CYC . . . DA 10 226.48 157.813 144.841 1 111.53 ? O2D CYC 200 AA 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 243 _model_server_stats.encode_time_ms 18 _model_server_stats.element_count 43 #