data_7SCF # _model_server_result.job_id XAR9Fd7BAVZdRucREUL2Tw _model_server_result.datetime_utc '2024-12-01 07:36:24' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7scf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":409}' # _entry.id 7SCF # _exptl.entry_id 7SCF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SCF _cell.length_a 69.102 _cell.length_b 71.57 _cell.length_c 145.095 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SCF _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,K,L,S 1 1 B,M,N,O,P,Q,R,T 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id K _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 156 n n C1 C2 GOL sing 157 n n C1 H11 GOL sing 158 n n C1 H12 GOL sing 159 n n O1 HO1 GOL sing 160 n n C2 O2 GOL sing 161 n n C2 C3 GOL sing 162 n n C2 H2 GOL sing 163 n n O2 HO2 GOL sing 164 n n C3 O3 GOL sing 165 n n C3 H31 GOL sing 166 n n C3 H32 GOL sing 167 n n O3 HO3 GOL sing 168 n n # _atom_sites.entry_id 7SCF _atom_sites.fract_transf_matrix[1][1] 0.014471 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013972 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006892 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 8YI A 1 401 401 8YI LIG . D 3 PEG A 1 402 402 PEG PEG . E 3 PEG A 1 403 403 PEG PEG . F 3 PEG A 1 404 405 PEG PEG . G 3 PEG A 1 405 406 PEG PEG . H 3 PEG A 1 406 407 PEG PEG . I 3 PEG A 1 407 408 PEG PEG . J 3 PEG A 1 408 409 PEG PEG . K 4 GOL A 1 409 501 GOL GOL . L 5 PO4 A 1 410 2 PO4 PO4 . M 2 8YI B 1 401 401 8YI LIG . N 3 PEG B 1 402 402 PEG PEG . O 3 PEG B 1 403 404 PEG PEG . P 3 PEG B 1 404 405 PEG PEG . Q 3 PEG B 1 405 501 PEG PEG . R 5 PO4 B 1 406 1 PO4 PO4 . S 6 HOH A 1 501 96 HOH HOH . S 6 HOH A 2 502 92 HOH HOH . S 6 HOH A 3 503 76 HOH HOH . S 6 HOH A 4 504 39 HOH HOH . S 6 HOH A 5 505 77 HOH HOH . S 6 HOH A 6 506 44 HOH HOH . S 6 HOH A 7 507 9 HOH HOH . S 6 HOH A 8 508 24 HOH HOH . S 6 HOH A 9 509 31 HOH HOH . S 6 HOH A 10 510 19 HOH HOH . S 6 HOH A 11 511 13 HOH HOH . S 6 HOH A 12 512 23 HOH HOH . S 6 HOH A 13 513 3 HOH HOH . S 6 HOH A 14 514 33 HOH HOH . S 6 HOH A 15 515 59 HOH HOH . S 6 HOH A 16 516 48 HOH HOH . S 6 HOH A 17 517 45 HOH HOH . S 6 HOH A 18 518 26 HOH HOH . S 6 HOH A 19 519 20 HOH HOH . S 6 HOH A 20 520 103 HOH HOH . S 6 HOH A 21 521 84 HOH HOH . S 6 HOH A 22 522 86 HOH HOH . S 6 HOH A 23 523 4 HOH HOH . S 6 HOH A 24 524 14 HOH HOH . S 6 HOH A 25 525 18 HOH HOH . S 6 HOH A 26 526 36 HOH HOH . S 6 HOH A 27 527 22 HOH HOH . S 6 HOH A 28 528 66 HOH HOH . S 6 HOH A 29 529 101 HOH HOH . S 6 HOH A 30 530 98 HOH HOH . S 6 HOH A 31 531 43 HOH HOH . S 6 HOH A 32 532 65 HOH HOH . S 6 HOH A 33 533 30 HOH HOH . S 6 HOH A 34 534 106 HOH HOH . S 6 HOH A 35 535 95 HOH HOH . S 6 HOH A 36 536 55 HOH HOH . S 6 HOH A 37 537 75 HOH HOH . S 6 HOH A 38 538 37 HOH HOH . S 6 HOH A 39 539 46 HOH HOH . S 6 HOH A 40 540 54 HOH HOH . S 6 HOH A 41 541 91 HOH HOH . S 6 HOH A 42 542 100 HOH HOH . S 6 HOH A 43 543 58 HOH HOH . S 6 HOH A 44 544 105 HOH HOH . S 6 HOH A 45 545 73 HOH HOH . S 6 HOH A 46 546 107 HOH HOH . S 6 HOH A 47 547 108 HOH HOH . S 6 HOH A 48 548 104 HOH HOH . T 6 HOH B 1 501 10 HOH HOH . T 6 HOH B 2 502 51 HOH HOH . T 6 HOH B 3 503 62 HOH HOH . T 6 HOH B 4 504 32 HOH HOH . T 6 HOH B 5 505 50 HOH HOH . T 6 HOH B 6 506 12 HOH HOH . T 6 HOH B 7 507 82 HOH HOH . T 6 HOH B 8 508 16 HOH HOH . T 6 HOH B 9 509 114 HOH HOH . T 6 HOH B 10 510 60 HOH HOH . T 6 HOH B 11 511 57 HOH HOH . T 6 HOH B 12 512 42 HOH HOH . T 6 HOH B 13 513 102 HOH HOH . T 6 HOH B 14 514 89 HOH HOH . T 6 HOH B 15 515 28 HOH HOH . T 6 HOH B 16 516 112 HOH HOH . T 6 HOH B 17 517 88 HOH HOH . T 6 HOH B 18 518 49 HOH HOH . T 6 HOH B 19 519 1 HOH HOH . T 6 HOH B 20 520 68 HOH HOH . T 6 HOH B 21 521 111 HOH HOH . T 6 HOH B 22 522 17 HOH HOH . T 6 HOH B 23 523 80 HOH HOH . T 6 HOH B 24 524 69 HOH HOH . T 6 HOH B 25 525 38 HOH HOH . T 6 HOH B 26 526 2 HOH HOH . T 6 HOH B 27 527 47 HOH HOH . T 6 HOH B 28 528 63 HOH HOH . T 6 HOH B 29 529 41 HOH HOH . T 6 HOH B 30 530 52 HOH HOH . T 6 HOH B 31 531 5 HOH HOH . T 6 HOH B 32 532 72 HOH HOH . T 6 HOH B 33 533 109 HOH HOH . T 6 HOH B 34 534 110 HOH HOH . T 6 HOH B 35 535 53 HOH HOH . T 6 HOH B 36 536 113 HOH HOH . T 6 HOH B 37 537 94 HOH HOH . T 6 HOH B 38 538 70 HOH HOH . T 6 HOH B 39 539 25 HOH HOH . T 6 HOH B 40 540 74 HOH HOH . T 6 HOH B 41 541 6 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . K 4 -13.87 -45.954 24.597 1 32.6 ? C1 GOL 409 A 1 HETATM 2 O O1 GOL . . . K 4 -13.815 -46.894 25.608 1 32.83 ? O1 GOL 409 A 1 HETATM 3 C C2 GOL . . . K 4 -15.341 -45.378 24.478 1 33.61 ? C2 GOL 409 A 1 HETATM 4 O O2 GOL . . . K 4 -15.822 -45.448 23.169 1 33.68 ? O2 GOL 409 A 1 HETATM 5 C C3 GOL . . . K 4 -16.266 -46.117 25.52 1 33.26 ? C3 GOL 409 A 1 HETATM 6 O O3 GOL . . . K 4 -17.008 -45.128 26.241 1 33.09 ? O3 GOL 409 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #