data_7SCN
#
_model_server_result.job_id            4fAuQuGyRMJK1ow1n8fpQQ 
_model_server_result.datetime_utc      '2024-10-11 00:30:35' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7scn 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Z","auth_seq_id":404}' 
#
_entry.id    7SCN 
#
_exptl.entry_id    7SCN 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          5 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    15 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    dodecameric 
_pdbx_struct_assembly.oligomeric_count      12 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 5 M N N 
? 5 N N N 
? 5 O N N 
? 5 P N N 
? 5 Q N N 
? 5 R N N 
? 5 S N N 
? 5 T N N 
? 5 U N N 
? 5 V N N 
? 5 W N N 
? 5 X N N 
? 5 Y N N 
? 5 Z N N 
? 5 AA N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 4 A CYS 8 1_555 B SG CYS 141 B CYS 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf2 A SG CYS 42 A CYS 46 1_555 A SG CYS 274 A CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf3 A SG CYS 55 A CYS 59 1_555 A SG CYS 67 A CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf4 A SG CYS 90 A CYS 94 1_555 A SG CYS 135 A CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf5 A SG CYS 278 A CYS 282 1_555 A SG CYS 302 A CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf6 B SG CYS 148 B CYS 474 1_555 B SG CYS 152 B CYS 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf7 C SG CYS 22 H CYS 529 1_555 C SG CYS 95 H CYS 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf8 D SG CYS 23 L CYS 646 1_555 D SG CYS 89 L CYS 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf9 E SG CYS 4 C CYS 8 1_555 F SG CYS 141 D CYS 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf10 E SG CYS 42 C CYS 46 1_555 E SG CYS 274 C CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.051 ? 
disulf ? disulf11 E SG CYS 55 C CYS 59 1_555 E SG CYS 67 C CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? 
disulf ? disulf12 E SG CYS 90 C CYS 94 1_555 E SG CYS 135 C CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf13 E SG CYS 278 C CYS 282 1_555 E SG CYS 302 C CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.02 ? 
disulf ? disulf14 F SG CYS 148 D CYS 474 1_555 F SG CYS 152 D CYS 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf15 G SG CYS 22 E CYS 529 1_555 G SG CYS 95 E CYS 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.012 ? 
disulf ? disulf16 H SG CYS 23 F CYS 646 1_555 H SG CYS 89 F CYS 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
disulf ? disulf17 I SG CYS 4 G CYS 8 1_555 J SG CYS 141 I CYS 467 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf18 I SG CYS 42 G CYS 46 1_555 I SG CYS 274 G CYS 278 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf19 I SG CYS 55 G CYS 59 1_555 I SG CYS 67 G CYS 71 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.016 ? 
disulf ? disulf20 I SG CYS 90 G CYS 94 1_555 I SG CYS 135 G CYS 139 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
disulf ? disulf21 I SG CYS 278 G CYS 282 1_555 I SG CYS 302 G CYS 306 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.019 ? 
disulf ? disulf22 J SG CYS 148 I CYS 474 1_555 J SG CYS 152 I CYS 478 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf23 K SG CYS 22 J CYS 529 1_555 K SG CYS 95 J CYS 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.011 ? 
disulf ? disulf24 L SG CYS 23 K CYS 646 1_555 L SG CYS 89 K CYS 712 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? 
covale ? covale1 A ND2 ASN 23 A ASN 27 1_555 N C1 NAG . A NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.513 ? 
covale ? covale2 A ND2 ASN 54 A ASN 58 1_555 M C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.514 ? 
covale ? covale3 A ND2 ASN 87 A ASN 91 1_555 O C1 NAG . A NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.509 ? 
covale ? covale4 A ND2 ASN 125 A ASN 129 1_555 P C1 NAG . A NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.519 ? 
covale ? covale5 A ND2 ASN 286 A ASN 290 1_555 Q C1 NAG . A NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? 
covale ? covale6 E ND2 ASN 23 C ASN 27 1_555 S C1 NAG . C NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.513 ? 
covale ? covale7 E ND2 ASN 54 C ASN 58 1_555 R C1 NAG . C NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.513 ? 
covale ? covale8 E ND2 ASN 87 C ASN 91 1_555 T C1 NAG . C NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.509 ? 
covale ? covale9 E ND2 ASN 125 C ASN 129 1_555 U C1 NAG . C NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.519 ? 
covale ? covale10 E ND2 ASN 286 C ASN 290 1_555 V C1 NAG . C NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? 
covale ? covale11 I ND2 ASN 23 G ASN 27 1_555 X C1 NAG . G NAG 402 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.512 ? 
covale ? covale12 I ND2 ASN 54 G ASN 58 1_555 W C1 NAG . G NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.513 ? 
covale ? covale13 I ND2 ASN 87 G ASN 91 1_555 Y C1 NAG . G NAG 403 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.509 ? 
covale ? covale14 I ND2 ASN 125 G ASN 129 1_555 Z C1 NAG . G NAG 404 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.519 ? 
covale ? covale15 I ND2 ASN 286 G ASN 290 1_555 AA C1 NAG . G NAG 405 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.524 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7SCN 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
M 5 NAG A 1 401 331 NAG NAG . 
N 5 NAG A 1 402 332 NAG NAG . 
O 5 NAG A 1 403 333 NAG NAG . 
P 5 NAG A 1 404 334 NAG NAG . 
Q 5 NAG A 1 405 336 NAG NAG . 
R 5 NAG C 1 401 331 NAG NAG . 
S 5 NAG C 1 402 332 NAG NAG . 
T 5 NAG C 1 403 333 NAG NAG . 
U 5 NAG C 1 404 334 NAG NAG . 
V 5 NAG C 1 405 336 NAG NAG . 
W 5 NAG G 1 401 331 NAG NAG . 
X 5 NAG G 1 402 332 NAG NAG . 
Y 5 NAG G 1 403 333 NAG NAG . 
Z 5 NAG G 1 404 334 NAG NAG . 
AA 5 NAG G 1 405 336 NAG NAG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . Z 5 202.463 202.959 121.573 1 35.06 ? C1 NAG 404 G 1 
HETATM 2 C C2 NAG . . . Z 5 203.841 203.647 121.98 1 29.88 ? C2 NAG 404 G 1 
HETATM 3 C C3 NAG . . . Z 5 204.748 202.588 122.686 1 31.85 ? C3 NAG 404 G 1 
HETATM 4 C C4 NAG . . . Z 5 203.999 202.051 123.965 1 36.73 ? C4 NAG 404 G 1 
HETATM 5 C C5 NAG . . . Z 5 202.621 201.418 123.53 1 36.02 ? C5 NAG 404 G 1 
HETATM 6 C C6 NAG . . . Z 5 201.698 201.059 124.698 1 27.74 ? C6 NAG 404 G 1 
HETATM 7 C C7 NAG . . . Z 5 204.674 205.073 119.79 1 32.79 ? C7 NAG 404 G 1 
HETATM 8 C C8 NAG . . . Z 5 203.855 206.337 119.565 1 29.49 ? C8 NAG 404 G 1 
HETATM 9 N N2 NAG . . . Z 5 204.464 204.217 120.785 1 35.69 ? N2 NAG 404 G 1 
HETATM 10 O O3 NAG . . . Z 5 205.989 203.205 123.071 1 38.13 ? O3 NAG 404 G 1 
HETATM 11 O O4 NAG . . . Z 5 204.808 201.078 124.636 1 38.2 ? O4 NAG 404 G 1 
HETATM 12 O O5 NAG . . . Z 5 201.829 202.429 122.786 1 31.88 ? O5 NAG 404 G 1 
HETATM 13 O O6 NAG . . . Z 5 202.166 199.994 125.514 1 23.94 ? O6 NAG 404 G 1 
HETATM 14 O O7 NAG . . . Z 5 205.593 204.802 119.015 1 39.73 ? O7 NAG 404 G 1 
#
_model_server_stats.io_time_ms              19 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           270 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           14 
#