data_7SEA # _model_server_result.job_id KhMu-2tbbEDALnCmVeohAQ _model_server_result.datetime_utc '2025-03-24 07:28:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sea # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":407}' # _entry.id 7SEA # _exptl.entry_id 7SEA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 163.101 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 6-(trifluoromethyl)pyrimidin-4-amine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SEA _cell.length_a 69.131 _cell.length_b 138.651 _cell.length_c 66.426 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SEA _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id H _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C5 H4 F3 N3' _chem_comp.formula_weight 163.101 _chem_comp.id 8XF _chem_comp.mon_nstd_flag . _chem_comp.name 6-(trifluoromethyl)pyrimidin-4-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C4 N2 8XF doub 1 n y C4 N1 8XF sing 2 n y N2 C1 8XF sing 3 n y F C 8XF sing 4 n n N1 C3 8XF doub 5 n y C1 C 8XF sing 6 n n C1 C2 8XF doub 7 n y C F2 8XF sing 8 n n C F1 8XF sing 9 n n C3 C2 8XF sing 10 n y C3 N 8XF sing 11 n n C4 H3 8XF sing 12 n n C2 H 8XF sing 13 n n N H2 8XF sing 14 n n N H1 8XF sing 15 n n # _atom_sites.entry_id 7SEA _atom_sites.fract_transf_matrix[1][1] 0.014465 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007212 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015054 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FMT A 1 401 1 FMT FMT . C 2 FMT A 1 402 2 FMT FMT . D 2 FMT A 1 403 3 FMT FMT . E 2 FMT A 1 404 4 FMT FMT . F 2 FMT A 1 405 5 FMT FMT . G 3 DMS A 1 406 3 DMS DMS . H 4 8XF A 1 407 1 8XF TV2 . I 5 HOH A 1 501 25 HOH HOH . I 5 HOH A 2 502 103 HOH HOH . I 5 HOH A 3 503 21 HOH HOH . I 5 HOH A 4 504 89 HOH HOH . I 5 HOH A 5 505 146 HOH HOH . I 5 HOH A 6 506 142 HOH HOH . I 5 HOH A 7 507 128 HOH HOH . I 5 HOH A 8 508 61 HOH HOH . I 5 HOH A 9 509 137 HOH HOH . I 5 HOH A 10 510 37 HOH HOH . I 5 HOH A 11 511 66 HOH HOH . I 5 HOH A 12 512 58 HOH HOH . I 5 HOH A 13 513 71 HOH HOH . I 5 HOH A 14 514 150 HOH HOH . I 5 HOH A 15 515 36 HOH HOH . I 5 HOH A 16 516 55 HOH HOH . I 5 HOH A 17 517 40 HOH HOH . I 5 HOH A 18 518 6 HOH HOH . I 5 HOH A 19 519 17 HOH HOH . I 5 HOH A 20 520 111 HOH HOH . I 5 HOH A 21 521 12 HOH HOH . I 5 HOH A 22 522 52 HOH HOH . I 5 HOH A 23 523 65 HOH HOH . I 5 HOH A 24 524 63 HOH HOH . I 5 HOH A 25 525 9 HOH HOH . I 5 HOH A 26 526 18 HOH HOH . I 5 HOH A 27 527 116 HOH HOH . I 5 HOH A 28 528 149 HOH HOH . I 5 HOH A 29 529 117 HOH HOH . I 5 HOH A 30 530 115 HOH HOH . I 5 HOH A 31 531 3 HOH HOH . I 5 HOH A 32 532 138 HOH HOH . I 5 HOH A 33 533 67 HOH HOH . I 5 HOH A 34 534 10 HOH HOH . I 5 HOH A 35 535 14 HOH HOH . I 5 HOH A 36 536 95 HOH HOH . I 5 HOH A 37 537 53 HOH HOH . I 5 HOH A 38 538 44 HOH HOH . I 5 HOH A 39 539 59 HOH HOH . I 5 HOH A 40 540 31 HOH HOH . I 5 HOH A 41 541 22 HOH HOH . I 5 HOH A 42 542 81 HOH HOH . I 5 HOH A 43 543 5 HOH HOH . I 5 HOH A 44 544 151 HOH HOH . I 5 HOH A 45 545 33 HOH HOH . I 5 HOH A 46 546 41 HOH HOH . I 5 HOH A 47 547 70 HOH HOH . I 5 HOH A 48 548 79 HOH HOH . I 5 HOH A 49 549 129 HOH HOH . I 5 HOH A 50 550 48 HOH HOH . I 5 HOH A 51 551 51 HOH HOH . I 5 HOH A 52 552 134 HOH HOH . I 5 HOH A 53 553 38 HOH HOH . I 5 HOH A 54 554 54 HOH HOH . I 5 HOH A 55 555 26 HOH HOH . I 5 HOH A 56 556 4 HOH HOH . I 5 HOH A 57 557 46 HOH HOH . I 5 HOH A 58 558 154 HOH HOH . I 5 HOH A 59 559 98 HOH HOH . I 5 HOH A 60 560 19 HOH HOH . I 5 HOH A 61 561 104 HOH HOH . I 5 HOH A 62 562 16 HOH HOH . I 5 HOH A 63 563 42 HOH HOH . I 5 HOH A 64 564 163 HOH HOH . I 5 HOH A 65 565 13 HOH HOH . I 5 HOH A 66 566 49 HOH HOH . I 5 HOH A 67 567 76 HOH HOH . I 5 HOH A 68 568 7 HOH HOH . I 5 HOH A 69 569 124 HOH HOH . I 5 HOH A 70 570 122 HOH HOH . I 5 HOH A 71 571 8 HOH HOH . I 5 HOH A 72 572 28 HOH HOH . I 5 HOH A 73 573 162 HOH HOH . I 5 HOH A 74 574 152 HOH HOH . I 5 HOH A 75 575 131 HOH HOH . I 5 HOH A 76 576 34 HOH HOH . I 5 HOH A 77 577 113 HOH HOH . I 5 HOH A 78 578 64 HOH HOH . I 5 HOH A 79 579 160 HOH HOH . I 5 HOH A 80 580 141 HOH HOH . I 5 HOH A 81 581 80 HOH HOH . I 5 HOH A 82 582 45 HOH HOH . I 5 HOH A 83 583 106 HOH HOH . I 5 HOH A 84 584 153 HOH HOH . I 5 HOH A 85 585 97 HOH HOH . I 5 HOH A 86 586 101 HOH HOH . I 5 HOH A 87 587 92 HOH HOH . I 5 HOH A 88 588 121 HOH HOH . I 5 HOH A 89 589 126 HOH HOH . I 5 HOH A 90 590 75 HOH HOH . I 5 HOH A 91 591 47 HOH HOH . I 5 HOH A 92 592 94 HOH HOH . I 5 HOH A 93 593 90 HOH HOH . I 5 HOH A 94 594 43 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 8XF . . . H 4 23.886 33.454 8.294 1 30.57 ? N1 8XF 407 A 1 HETATM 2 N N2 8XF . . . H 4 23.762 35.811 7.807 1 41.8 ? N2 8XF 407 A 1 HETATM 3 C C4 8XF . . . H 4 24.24 34.571 7.642 1 37.66 ? C4 8XF 407 A 1 HETATM 4 C C3 8XF . . . H 4 22.919 33.566 9.215 1 43.25 ? C3 8XF 407 A 1 HETATM 5 C C2 8XF . . . H 4 22.355 34.794 9.513 1 47.02 ? C2 8XF 407 A 1 HETATM 6 C C1 8XF . . . H 4 22.84 35.889 8.785 1 49.24 ? C1 8XF 407 A 1 HETATM 7 N N 8XF . . . H 4 22.487 32.423 9.796 1 41.16 ? N 8XF 407 A 1 HETATM 8 C C 8XF . . . H 4 22.481 37.295 9.203 1 51.18 ? C 8XF 407 A 1 HETATM 9 F F 8XF . . . H 4 22.538 38.16 8.207 1 46.5 ? F 8XF 407 A 1 HETATM 10 F F1 8XF . . . H 4 23.306 37.754 10.145 1 56.47 ? F1 8XF 407 A 1 HETATM 11 F F2 8XF . . . H 4 21.24 37.393 9.694 1 52.97 ? F2 8XF 407 A 1 HETATM 12 H H3 8XF . . . H 4 25.013 34.45 6.884 1 45.21 ? H3 8XF 407 A 1 HETATM 13 H H 8XF . . . H 4 21.579 34.911 10.268 1 56.44 ? H 8XF 407 A 1 HETATM 14 H H2 8XF . . . H 4 22.909 31.528 9.57 1 49.41 ? H2 8XF 407 A 1 HETATM 15 H H1 8XF . . . H 4 21.731 32.432 10.473 1 49.41 ? H1 8XF 407 A 1 # _model_server_stats.io_time_ms 23 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 660 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 15 #