data_7SEH
#
_model_server_result.job_id            D2psT0asw6h9niEAqZ78aQ 
_model_server_result.datetime_utc      '2024-11-14 09:01:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7seh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":601}' 
#
_entry.id    7SEH 
#
_exptl.entry_id    7SEH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7SEH 
_cell.length_a            74.64 
_cell.length_b            87.86 
_cell.length_c            160.68 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7SEH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 1 2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 2_545 -x+1/2,-y-1,z+1/2 -1 0 0 0 -1 0 0 0 1 37.32 -87.86 80.34 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 237 n n 
PA O2A NAP sing 238 n n 
PA O5B NAP sing 239 n n 
PA O3 NAP sing 240 n n 
O2A HOA2 NAP sing 241 n n 
O5B C5B NAP sing 242 n n 
C5B C4B NAP sing 243 n n 
C5B H51A NAP sing 244 n n 
C5B H52A NAP sing 245 n n 
C4B O4B NAP sing 246 n n 
C4B C3B NAP sing 247 n n 
C4B H4B NAP sing 248 n n 
O4B C1B NAP sing 249 n n 
C3B O3B NAP sing 250 n n 
C3B C2B NAP sing 251 n n 
C3B H3B NAP sing 252 n n 
O3B HO3A NAP sing 253 n n 
C2B O2B NAP sing 254 n n 
C2B C1B NAP sing 255 n n 
C2B H2B NAP sing 256 n n 
O2B P2B NAP sing 257 n n 
C1B N9A NAP sing 258 n n 
C1B H1B NAP sing 259 n n 
N9A C8A NAP sing 260 n y 
N9A C4A NAP sing 261 n y 
C8A N7A NAP doub 262 n y 
C8A H8A NAP sing 263 n n 
N7A C5A NAP sing 264 n y 
C5A C6A NAP sing 265 n y 
C5A C4A NAP doub 266 n y 
C6A N6A NAP sing 267 n n 
C6A N1A NAP doub 268 n y 
N6A H61A NAP sing 269 n n 
N6A H62A NAP sing 270 n n 
N1A C2A NAP sing 271 n y 
C2A N3A NAP doub 272 n y 
C2A H2A NAP sing 273 n n 
N3A C4A NAP sing 274 n y 
O3 PN NAP sing 275 n n 
PN O1N NAP doub 276 n n 
PN O2N NAP sing 277 n n 
PN O5D NAP sing 278 n n 
O5D C5D NAP sing 279 n n 
C5D C4D NAP sing 280 n n 
C5D H51N NAP sing 281 n n 
C5D H52N NAP sing 282 n n 
C4D O4D NAP sing 283 n n 
C4D C3D NAP sing 284 n n 
C4D H4D NAP sing 285 n n 
O4D C1D NAP sing 286 n n 
C3D O3D NAP sing 287 n n 
C3D C2D NAP sing 288 n n 
C3D H3D NAP sing 289 n n 
O3D HO3N NAP sing 290 n n 
C2D O2D NAP sing 291 n n 
C2D C1D NAP sing 292 n n 
C2D H2D NAP sing 293 n n 
O2D HO2N NAP sing 294 n n 
C1D N1N NAP sing 295 n n 
C1D H1D NAP sing 296 n n 
N1N C2N NAP sing 297 n y 
N1N C6N NAP doub 298 n y 
C2N C3N NAP doub 299 n y 
C2N H2N NAP sing 300 n n 
C3N C7N NAP sing 301 n n 
C3N C4N NAP sing 302 n y 
C7N O7N NAP doub 303 n n 
C7N N7N NAP sing 304 n n 
N7N H71N NAP sing 305 n n 
N7N H72N NAP sing 306 n n 
C4N C5N NAP doub 307 n y 
C4N H4N NAP sing 308 n n 
C5N C6N NAP sing 309 n y 
C5N H5N NAP sing 310 n n 
C6N H6N NAP sing 311 n n 
P2B O1X NAP doub 312 n n 
P2B O2X NAP sing 313 n n 
P2B O3X NAP sing 314 n n 
O2X HOP2 NAP sing 315 n n 
O3X HOP3 NAP sing 316 n n 
#
_atom_sites.entry_id                     7SEH 
_atom_sites.fract_transf_matrix[1][1]    0.013398 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011382 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006224 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 NAP A 1 601 601 NAP NAP . 
D 2 NAP B 1 601 601 NAP NAP . 
E 3 HOH A 1 701 31 HOH HOH . 
E 3 HOH A 2 702 19 HOH HOH . 
E 3 HOH A 3 703 15 HOH HOH . 
E 3 HOH A 4 704 2 HOH HOH . 
E 3 HOH A 5 705 29 HOH HOH . 
E 3 HOH A 6 706 17 HOH HOH . 
E 3 HOH A 7 707 34 HOH HOH . 
E 3 HOH A 8 708 13 HOH HOH . 
E 3 HOH A 9 709 32 HOH HOH . 
E 3 HOH A 10 710 35 HOH HOH . 
E 3 HOH A 11 711 36 HOH HOH . 
E 3 HOH A 12 712 16 HOH HOH . 
E 3 HOH A 13 713 18 HOH HOH . 
E 3 HOH A 14 714 1 HOH HOH . 
E 3 HOH A 15 715 27 HOH HOH . 
E 3 HOH A 16 716 5 HOH HOH . 
E 3 HOH A 17 717 24 HOH HOH . 
E 3 HOH A 18 718 33 HOH HOH . 
F 3 HOH B 1 701 30 HOH HOH . 
F 3 HOH B 2 702 11 HOH HOH . 
F 3 HOH B 3 703 8 HOH HOH . 
F 3 HOH B 4 704 3 HOH HOH . 
F 3 HOH B 5 705 20 HOH HOH . 
F 3 HOH B 6 706 7 HOH HOH . 
F 3 HOH B 7 707 9 HOH HOH . 
F 3 HOH B 8 708 10 HOH HOH . 
F 3 HOH B 9 709 23 HOH HOH . 
F 3 HOH B 10 710 14 HOH HOH . 
F 3 HOH B 11 711 4 HOH HOH . 
F 3 HOH B 12 712 6 HOH HOH . 
F 3 HOH B 13 713 28 HOH HOH . 
F 3 HOH B 14 714 22 HOH HOH . 
F 3 HOH B 15 715 12 HOH HOH . 
F 3 HOH B 16 716 21 HOH HOH . 
F 3 HOH B 17 717 25 HOH HOH . 
F 3 HOH B 18 718 26 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . D 2 41.97 -9.232 -50.027 1 137.66 ? PA NAP 601 B 1 
HETATM 2 O O1A NAP . . . D 2 43.072 -10.236 -49.999 1 166.44 ? O1A NAP 601 B 1 
HETATM 3 O O2A NAP . . . D 2 42.338 -7.784 -50.018 1 148.22 ? O2A NAP 601 B 1 
HETATM 4 O O5B NAP . . . D 2 40.969 -9.532 -48.809 1 148.77 ? O5B NAP 601 B 1 
HETATM 5 C C5B NAP . . . D 2 39.591 -9.089 -48.905 1 155.07 ? C5B NAP 601 B 1 
HETATM 6 C C4B NAP . . . D 2 39.228 -8.242 -47.709 1 147.77 ? C4B NAP 601 B 1 
HETATM 7 O O4B NAP . . . D 2 39.663 -8.91 -46.498 1 150.9 ? O4B NAP 601 B 1 
HETATM 8 C C3B NAP . . . D 2 39.865 -6.849 -47.625 1 139.29 ? C3B NAP 601 B 1 
HETATM 9 O O3B NAP . . . D 2 39.167 -5.91 -48.438 1 118.55 ? O3B NAP 601 B 1 
HETATM 10 C C2B NAP . . . D 2 39.742 -6.574 -46.131 1 146.74 ? C2B NAP 601 B 1 
HETATM 11 O O2B NAP . . . D 2 38.399 -6.143 -45.843 1 152.45 ? O2B NAP 601 B 1 
HETATM 12 C C1B NAP . . . D 2 40.029 -7.953 -45.53 1 146.41 ? C1B NAP 601 B 1 
HETATM 13 N N9A NAP . . . D 2 41.424 -8.2 -45.168 1 145.01 ? N9A NAP 601 B 1 
HETATM 14 C C8A NAP . . . D 2 42.502 -8.284 -46.017 1 141.22 ? C8A NAP 601 B 1 
HETATM 15 N N7A NAP . . . D 2 43.633 -8.531 -45.402 1 134.6 ? N7A NAP 601 B 1 
HETATM 16 C C5A NAP . . . D 2 43.282 -8.636 -44.063 1 139.29 ? C5A NAP 601 B 1 
HETATM 17 C C6A NAP . . . D 2 44.036 -8.898 -42.9 1 137.7 ? C6A NAP 601 B 1 
HETATM 18 N N6A NAP . . . D 2 45.348 -9.113 -42.899 1 131.89 ? N6A NAP 601 B 1 
HETATM 19 N N1A NAP . . . D 2 43.372 -8.94 -41.718 1 146.16 ? N1A NAP 601 B 1 
HETATM 20 C C2A NAP . . . D 2 42.049 -8.724 -41.72 1 149.14 ? C2A NAP 601 B 1 
HETATM 21 N N3A NAP . . . D 2 41.241 -8.468 -42.746 1 145.43 ? N3A NAP 601 B 1 
HETATM 22 C C4A NAP . . . D 2 41.921 -8.437 -43.906 1 143.16 ? C4A NAP 601 B 1 
HETATM 23 O O3 NAP . . . D 2 41.065 -9.503 -51.326 1 138.79 ? O3 NAP 601 B 1 
HETATM 24 P PN NAP . . . D 2 40.25 -10.735 -51.958 1 142.05 ? PN NAP 601 B 1 
HETATM 25 O O1N NAP . . . D 2 38.851 -10.683 -51.443 1 138.87 ? O1N NAP 601 B 1 
HETATM 26 O O2N NAP . . . D 2 40.437 -10.691 -53.439 1 148.16 ? O2N NAP 601 B 1 
HETATM 27 O O5D NAP . . . D 2 41.007 -12.026 -51.36 1 132.17 ? O5D NAP 601 B 1 
HETATM 28 C C5D NAP . . . D 2 40.323 -12.924 -50.438 1 133.37 ? C5D NAP 601 B 1 
HETATM 29 C C4D NAP . . . D 2 40.638 -14.369 -50.759 1 130.72 ? C4D NAP 601 B 1 
HETATM 30 O O4D NAP . . . D 2 40.753 -14.549 -52.185 1 126.11 ? O4D NAP 601 B 1 
HETATM 31 C C3D NAP . . . D 2 41.938 -14.931 -50.159 1 128.72 ? C3D NAP 601 B 1 
HETATM 32 O O3D NAP . . . D 2 41.668 -15.876 -49.133 1 130.75 ? O3D NAP 601 B 1 
HETATM 33 C C2D NAP . . . D 2 42.622 -15.623 -51.343 1 126.01 ? C2D NAP 601 B 1 
HETATM 34 O O2D NAP . . . D 2 43.07 -16.921 -50.99 1 121.43 ? O2D NAP 601 B 1 
HETATM 35 C C1D NAP . . . D 2 41.555 -15.685 -52.431 1 122.65 ? C1D NAP 601 B 1 
HETATM 36 N N1N NAP . . . D 2 42.145 -15.611 -53.801 1 130.85 ? N1N NAP 601 B 1 
HETATM 37 C C2N NAP . . . D 2 43.107 -16.516 -54.15 1 137.85 ? C2N NAP 601 B 1 
HETATM 38 C C3N NAP . . . D 2 43.296 -16.796 -55.491 1 141.91 ? C3N NAP 601 B 1 
HETATM 39 C C7N NAP . . . D 2 43.708 -18.209 -55.828 1 140.68 ? C7N NAP 601 B 1 
HETATM 40 O O7N NAP . . . D 2 43.621 -19.083 -54.966 1 128.11 ? O7N NAP 601 B 1 
HETATM 41 N N7N NAP . . . D 2 44.133 -18.458 -57.058 1 148.75 ? N7N NAP 601 B 1 
HETATM 42 C C4N NAP . . . D 2 43.037 -15.77 -56.408 1 143.04 ? C4N NAP 601 B 1 
HETATM 43 C C5N NAP . . . D 2 42.195 -14.737 -56.035 1 134.13 ? C5N NAP 601 B 1 
HETATM 44 C C6N NAP . . . D 2 41.756 -14.671 -54.724 1 133.34 ? C6N NAP 601 B 1 
HETATM 45 P P2B NAP . . . D 2 38.103 -5.033 -44.676 1 140.15 ? P2B NAP 601 B 1 
HETATM 46 O O1X NAP . . . D 2 37.222 -3.982 -45.33 1 129.02 ? O1X NAP 601 B 1 
HETATM 47 O O2X NAP . . . D 2 39.429 -4.453 -44.197 1 129.09 ? O2X NAP 601 B 1 
HETATM 48 O O3X NAP . . . D 2 37.354 -5.744 -43.56 1 124.25 ? O3X NAP 601 B 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           40 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           289 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           48 
#