data_7SES # _model_server_result.job_id yS64nKdQOpOEPc3bJQ7vjw _model_server_result.datetime_utc '2024-10-19 09:41:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7ses # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":701}' # _entry.id 7SES # _exptl.entry_id 7SES _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 406.439 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (2P)-2-{4-[4-(aminomethyl)-1-oxo-1,2-dihydrophthalazin-6-yl]-1-methyl-1H-pyrazol-5-yl}naphthalene-1-carbonitrile _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SES _cell.length_a 104.783 _cell.length_b 138.053 _cell.length_c 179.034 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SES _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 _symmetry.space_group_name_Hall 'I 2 2' _symmetry.space_group_name_H-M 'I 2 2 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H18 N6 O' _chem_comp.formula_weight 406.439 _chem_comp.id 97X _chem_comp.mon_nstd_flag . _chem_comp.name (2P)-2-{4-[4-(aminomethyl)-1-oxo-1,2-dihydrophthalazin-6-yl]-1-methyl-1H-pyrazol-5-yl}naphthalene-1-carbonitrile _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 97X trip 1 n n C2 C3 97X sing 2 n n O28 C27 97X doub 3 n n C27 N25 97X sing 4 n n C27 C20 97X sing 5 n n C19 C20 97X doub 6 n y C19 C18 97X sing 7 n y N25 N24 97X sing 8 n n C20 C21 97X sing 9 n y C18 C17 97X doub 10 n y C34 C33 97X doub 11 n y C34 C4 97X sing 12 n y N24 C23 97X doub 13 n n C21 C23 97X sing 14 n n C21 C22 97X doub 15 n y C17 C22 97X sing 16 n y C17 C16 97X sing 17 n n C33 C32 97X sing 18 n y C15 C16 97X sing 19 n y C15 N14 97X doub 20 n y C23 C29 97X sing 21 n n C3 C4 97X doub 22 n y C3 C10 97X sing 23 n y C16 C11 97X doub 24 n y N30 C29 97X sing 25 n n N14 N12 97X sing 26 n y C4 C7 97X sing 27 n y C11 N12 97X sing 28 n y C11 C10 97X sing 29 n n N12 C13 97X sing 30 n n C10 C9 97X doub 31 n y C32 C31 97X doub 32 n y C7 C31 97X sing 33 n y C7 C8 97X doub 34 n y C9 C8 97X sing 35 n y C8 H1 97X sing 36 n n C13 H2 97X sing 37 n n C13 H3 97X sing 38 n n C13 H4 97X sing 39 n n C15 H5 97X sing 40 n n C22 H6 97X sing 41 n n C18 H7 97X sing 42 n n C19 H8 97X sing 43 n n C29 H9 97X sing 44 n n C29 H10 97X sing 45 n n C31 H11 97X sing 46 n n C32 H12 97X sing 47 n n C33 H13 97X sing 48 n n C34 H14 97X sing 49 n n C9 H15 97X sing 50 n n N25 H16 97X sing 51 n n N30 H17 97X sing 52 n n N30 H18 97X sing 53 n n # _atom_sites.entry_id 7SES _atom_sites.fract_transf_matrix[1][1] 0.009544 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.007244 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005586 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 97X A 1 701 710 97X LIG . D 4 MTA A 1 702 711 MTA MTA . E 5 HOH A 1 801 25 HOH HOH . E 5 HOH A 2 802 86 HOH HOH . E 5 HOH A 3 803 82 HOH HOH . E 5 HOH A 4 804 1 HOH HOH . E 5 HOH A 5 805 77 HOH HOH . E 5 HOH A 6 806 22 HOH HOH . E 5 HOH A 7 807 66 HOH HOH . E 5 HOH A 8 808 24 HOH HOH . E 5 HOH A 9 809 104 HOH HOH . E 5 HOH A 10 810 23 HOH HOH . E 5 HOH A 11 811 89 HOH HOH . E 5 HOH A 12 812 3 HOH HOH . E 5 HOH A 13 813 61 HOH HOH . E 5 HOH A 14 814 19 HOH HOH . E 5 HOH A 15 815 109 HOH HOH . E 5 HOH A 16 816 7 HOH HOH . E 5 HOH A 17 817 11 HOH HOH . E 5 HOH A 18 818 107 HOH HOH . E 5 HOH A 19 819 35 HOH HOH . E 5 HOH A 20 820 57 HOH HOH . E 5 HOH A 21 821 14 HOH HOH . E 5 HOH A 22 822 8 HOH HOH . E 5 HOH A 23 823 32 HOH HOH . E 5 HOH A 24 824 34 HOH HOH . E 5 HOH A 25 825 17 HOH HOH . E 5 HOH A 26 826 30 HOH HOH . E 5 HOH A 27 827 31 HOH HOH . E 5 HOH A 28 828 28 HOH HOH . E 5 HOH A 29 829 69 HOH HOH . E 5 HOH A 30 830 60 HOH HOH . E 5 HOH A 31 831 85 HOH HOH . E 5 HOH A 32 832 50 HOH HOH . E 5 HOH A 33 833 72 HOH HOH . E 5 HOH A 34 834 36 HOH HOH . E 5 HOH A 35 835 110 HOH HOH . E 5 HOH A 36 836 97 HOH HOH . E 5 HOH A 37 837 18 HOH HOH . E 5 HOH A 38 838 108 HOH HOH . E 5 HOH A 39 839 84 HOH HOH . F 5 HOH B 1 401 16 HOH HOH . F 5 HOH B 2 402 93 HOH HOH . F 5 HOH B 3 403 96 HOH HOH . F 5 HOH B 4 404 78 HOH HOH . F 5 HOH B 5 405 71 HOH HOH . F 5 HOH B 6 406 92 HOH HOH . F 5 HOH B 7 407 51 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 97X . . . C 3 -30.422 -50.41 -12.494 1 42.05 ? N1 97X 701 A 1 HETATM 2 C C4 97X . . . C 3 -28.536 -51.061 -9.548 1 43.95 ? C4 97X 701 A 1 HETATM 3 C C7 97X . . . C 3 -28.183 -51.107 -8.191 1 43.88 ? C7 97X 701 A 1 HETATM 4 C C8 97X . . . C 3 -29.057 -50.592 -7.25 1 44.45 ? C8 97X 701 A 1 HETATM 5 C C10 97X . . . C 3 -30.616 -49.974 -8.973 1 44.84 ? C10 97X 701 A 1 HETATM 6 N N12 97X . . . C 3 -33.148 -50.115 -9.285 1 38.53 ? N12 97X 701 A 1 HETATM 7 C C13 97X . . . C 3 -33.253 -51.485 -8.816 1 35.76 ? C13 97X 701 A 1 HETATM 8 C C15 97X . . . C 3 -33.67 -48.104 -10.072 1 43.45 ? C15 97X 701 A 1 HETATM 9 C C17 97X . . . C 3 -31.374 -46.947 -10.151 1 40.06 ? C17 97X 701 A 1 HETATM 10 C C20 97X . . . C 3 -29.862 -44.673 -10.668 1 44.3 ? C20 97X 701 A 1 HETATM 11 C C21 97X . . . C 3 -31.164 -44.527 -10.207 1 46.33 ? C21 97X 701 A 1 HETATM 12 C C22 97X . . . C 3 -31.904 -45.676 -9.956 1 40.87 ? C22 97X 701 A 1 HETATM 13 C C11 97X . . . C 3 -31.966 -49.377 -9.376 1 37.63 ? C11 97X 701 A 1 HETATM 14 C C16 97X . . . C 3 -32.272 -48.153 -9.857 1 39.9 ? C16 97X 701 A 1 HETATM 15 C C18 97X . . . C 3 -30.075 -47.055 -10.617 1 41.05 ? C18 97X 701 A 1 HETATM 16 C C19 97X . . . C 3 -29.31 -45.929 -10.874 1 44.73 ? C19 97X 701 A 1 HETATM 17 C C2 97X . . . C 3 -30.133 -50.45 -11.402 1 44.62 ? C2 97X 701 A 1 HETATM 18 C C23 97X . . . C 3 -31.684 -43.194 -10.007 1 44.05 ? C23 97X 701 A 1 HETATM 19 C C27 97X . . . C 3 -29.044 -43.477 -10.941 1 41.75 ? C27 97X 701 A 1 HETATM 20 C C29 97X . . . C 3 -33.108 -43.006 -9.499 1 39.72 ? C29 97X 701 A 1 HETATM 21 C C3 97X . . . C 3 -29.755 -50.499 -9.927 1 45.14 ? C3 97X 701 A 1 HETATM 22 C C31 97X . . . C 3 -26.965 -51.669 -7.814 1 40.7 ? C31 97X 701 A 1 HETATM 23 C C32 97X . . . C 3 -26.112 -52.175 -8.775 1 50.51 ? C32 97X 701 A 1 HETATM 24 C C33 97X . . . C 3 -26.458 -52.129 -10.105 1 55.63 ? C33 97X 701 A 1 HETATM 25 C C34 97X . . . C 3 -27.659 -51.578 -10.493 1 46.28 ? C34 97X 701 A 1 HETATM 26 C C9 97X . . . C 3 -30.256 -50.04 -7.643 1 43.08 ? C9 97X 701 A 1 HETATM 27 N N14 97X . . . C 3 -34.232 -49.316 -9.723 1 39.73 ? N14 97X 701 A 1 HETATM 28 N N24 97X . . . C 3 -30.91 -42.089 -10.269 1 43.42 ? N24 97X 701 A 1 HETATM 29 N N25 97X . . . C 3 -29.589 -42.213 -10.736 1 37.96 ? N25 97X 701 A 1 HETATM 30 N N30 97X . . . C 3 -33.579 -41.681 -9.855 1 37.78 ? N30 97X 701 A 1 HETATM 31 O O28 97X . . . C 3 -27.733 -43.6 -11.399 1 46.39 ? O28 97X 701 A 1 # _model_server_stats.io_time_ms 131 _model_server_stats.parse_time_ms 16 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 335 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #