data_7SG2
#
_model_server_result.job_id            O0VldMf9ctcTl2lpTHr9XQ 
_model_server_result.datetime_utc      '2024-11-17 17:43:25' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7sg2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":201}' 
#
_entry.id    7SG2 
#
_exptl.entry_id    7SG2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          6 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.16 
_cell.angle_gamma         90 
_cell.entry_id            7SG2 
_cell.length_a            137.245 
_cell.length_b            75.108 
_cell.length_c            216.431 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7SG2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? pentameric 5 author_defined_assembly 1 
? pentameric 5 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,E,F,G,K,L,M,N,Q,T,U,W 1 1 
C,D,H,I,J,O,P,R,S,V 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 6 K N N 
? 6 O N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 109 A CYS 107 1_555 A SG CYS 165 A CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf2 B SG CYS 28 B CYS 15 1_555 B SG CYS 92 B CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf3 B SG CYS 130 B CYS 117 1_555 B SG CYS 186 B CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf4 C SG CYS 109 F CYS 107 1_555 C SG CYS 165 F CYS 163 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf5 D SG CYS 28 G CYS 15 1_555 D SG CYS 92 G CYS 79 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf6 D SG CYS 130 G CYS 117 1_555 D SG CYS 186 G CYS 173 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? 
disulf ? disulf7 E SG CYS 22 D CYS 23 1_555 E SG CYS 88 D CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf8 E SG CYS 132 D CYS 151 1_555 E SG CYS 182 D CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf9 E SG CYS 157 D CYS 176 1_555 F SG CYS 173 E CYS 184 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? 
disulf ? disulf10 F SG CYS 24 E CYS 23 1_555 F SG CYS 94 E CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf11 F SG CYS 147 E CYS 158 1_555 F SG CYS 212 E CYS 223 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
disulf ? disulf12 I SG CYS 22 I CYS 23 1_555 I SG CYS 88 I CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.032 ? 
disulf ? disulf13 I SG CYS 132 I CYS 151 1_555 I SG CYS 182 I CYS 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? 
disulf ? disulf14 I SG CYS 157 I CYS 176 1_555 J SG CYS 173 J CYS 183 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.03 ? 
disulf ? disulf15 J SG CYS 24 J CYS 23 1_555 J SG CYS 94 J CYS 104 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? 
disulf ? disulf16 J SG CYS 147 J CYS 157 1_555 J SG CYS 212 J CYS 222 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? 
covale ? covale1 A ND2 ASN 120 A ASN 118 1_555 K C1 NAG . A NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.439 ? 
covale ? covale2 C ND2 ASN 120 F ASN 118 1_555 O C1 NAG . F NAG 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.481 ? 
metalc ? metalc1 B O THR 198 B THR 185 1_555 N CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.019 ? 
metalc ? metalc2 B OG1 THR 198 B THR 185 1_555 N CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.614 ? 
metalc ? metalc3 B OE2 GLU 200 B GLU 187 1_555 N CA CA . B CA 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.089 ? 
metalc ? metalc4 F OD1 ASP 12 E ASP 11 1_555 Q CA CA . E CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.083 ? 
metalc ? metalc5 F O ILE 13 E ILE 12 1_555 Q CA CA . E CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? 
metalc ? metalc6 F OG SER 220 E SER 231 1_555 Q CA CA . E CA 301 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.922 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 252 n n 
C1 O1 NAG sing 253 n n 
C1 O5 NAG sing 254 n n 
C1 H1 NAG sing 255 n n 
C2 C3 NAG sing 256 n n 
C2 N2 NAG sing 257 n n 
C2 H2 NAG sing 258 n n 
C3 C4 NAG sing 259 n n 
C3 O3 NAG sing 260 n n 
C3 H3 NAG sing 261 n n 
C4 C5 NAG sing 262 n n 
C4 O4 NAG sing 263 n n 
C4 H4 NAG sing 264 n n 
C5 C6 NAG sing 265 n n 
C5 O5 NAG sing 266 n n 
C5 H5 NAG sing 267 n n 
C6 O6 NAG sing 268 n n 
C6 H61 NAG sing 269 n n 
C6 H62 NAG sing 270 n n 
C7 C8 NAG sing 271 n n 
C7 N2 NAG sing 272 n n 
C7 O7 NAG doub 273 n n 
C8 H81 NAG sing 274 n n 
C8 H82 NAG sing 275 n n 
C8 H83 NAG sing 276 n n 
N2 HN2 NAG sing 277 n n 
O1 HO1 NAG sing 278 n n 
O3 HO3 NAG sing 279 n n 
O4 HO4 NAG sing 280 n n 
O6 HO6 NAG sing 281 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7SG2 
_atom_sites.fract_transf_matrix[1][1]    0.007286 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001703 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.013314 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004745 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
K 6 NAG A 1 201 201 NAG NAG . 
L 7 EDO A 1 202 203 EDO EDO . 
M 8 ACT A 1 203 204 ACT ACT . 
N 9 CA B 1 201 1 CA CA . 
O 6 NAG F 1 201 201 NAG NAG . 
P 8 ACT F 1 202 301 ACT ACT . 
Q 9 CA E 1 301 2 CA CA . 
R 7 EDO J 1 300 300 EDO EDO . 
S 7 EDO J 1 301 301 EDO EDO . 
T 10 HOH A 1 301 2 HOH HOH . 
T 10 HOH A 2 302 6 HOH HOH . 
U 10 HOH B 1 301 9 HOH HOH . 
U 10 HOH B 2 302 7 HOH HOH . 
U 10 HOH B 3 303 4 HOH HOH . 
V 10 HOH F 1 301 10 HOH HOH . 
W 10 HOH E 1 401 8 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . K 6 -37.128 -2.17 42.907 1 79.72 ? C1 NAG 201 A 1 
HETATM 2 C C2 NAG . . . K 6 -36.032 -1.427 42.135 1 92.23 ? C2 NAG 201 A 1 
HETATM 3 C C3 NAG . . . K 6 -36.173 -1.676 40.638 1 102.46 ? C3 NAG 201 A 1 
HETATM 4 C C4 NAG . . . K 6 -36.23 -3.168 40.334 1 100.17 ? C4 NAG 201 A 1 
HETATM 5 C C5 NAG . . . K 6 -37.306 -3.856 41.166 1 93.75 ? C5 NAG 201 A 1 
HETATM 6 C C6 NAG . . . K 6 -37.278 -5.361 41.037 1 81.61 ? C6 NAG 201 A 1 
HETATM 7 C C7 NAG . . . K 6 -34.995 0.676 42.858 1 79.41 ? C7 NAG 201 A 1 
HETATM 8 C C8 NAG . . . K 6 -35.204 2.14 43.105 1 72.23 ? C8 NAG 201 A 1 
HETATM 9 N N2 NAG . . . K 6 -36.062 -0.002 42.423 1 91.59 ? N2 NAG 201 A 1 
HETATM 10 O O3 NAG . . . K 6 -35.073 -1.085 39.955 1 101.29 ? O3 NAG 201 A 1 
HETATM 11 O O4 NAG . . . K 6 -36.5 -3.375 38.952 1 89.28 ? O4 NAG 201 A 1 
HETATM 12 O O5 NAG . . . K 6 -37.114 -3.557 42.557 1 78.59 ? O5 NAG 201 A 1 
HETATM 13 O O6 NAG . . . K 6 -37.391 -5.993 42.304 1 61.55 ? O6 NAG 201 A 1 
HETATM 14 O O7 NAG . . . K 6 -33.911 0.133 43.044 1 75 ? O7 NAG 201 A 1 
#
_model_server_stats.io_time_ms              37 
_model_server_stats.parse_time_ms           27 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           370 
_model_server_stats.encode_time_ms          11 
_model_server_stats.element_count           14 
#