data_7SJB
#
_model_server_result.job_id            mF9VwCcoAIDC11Ythl5c3A 
_model_server_result.datetime_utc      '2024-11-14 14:38:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7sjb 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    7SJB 
#
_exptl.entry_id    7SJB 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7SJB 
_cell.length_a            60.716 
_cell.length_b            67.532 
_cell.length_c            67.44 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7SJB 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,J 1 1 
B,G,H,I,K 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 G N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.177 ? 
metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 G FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.134 ? 
metalc ? metalc3 G FE HEM . B HEM 201 1_555 K O HOH . B HOH 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.462 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 168 n n 
CHA C4D HEM doub 169 n n 
CHA HHA HEM sing 170 n n 
CHB C4A HEM sing 171 n n 
CHB C1B HEM doub 172 n n 
CHB HHB HEM sing 173 n n 
CHC C4B HEM sing 174 n n 
CHC C1C HEM doub 175 n n 
CHC HHC HEM sing 176 n n 
CHD C4C HEM doub 177 n n 
CHD C1D HEM sing 178 n n 
CHD HHD HEM sing 179 n n 
C1A C2A HEM doub 180 n y 
C1A NA HEM sing 181 n y 
C2A C3A HEM sing 182 n y 
C2A CAA HEM sing 183 n n 
C3A C4A HEM doub 184 n y 
C3A CMA HEM sing 185 n n 
C4A NA HEM sing 186 n y 
CMA HMA HEM sing 187 n n 
CMA HMAA HEM sing 188 n n 
CMA HMAB HEM sing 189 n n 
CAA CBA HEM sing 190 n n 
CAA HAA HEM sing 191 n n 
CAA HAAA HEM sing 192 n n 
CBA CGA HEM sing 193 n n 
CBA HBA HEM sing 194 n n 
CBA HBAA HEM sing 195 n n 
CGA O1A HEM doub 196 n n 
CGA O2A HEM sing 197 n n 
C1B C2B HEM sing 198 n n 
C1B NB HEM sing 199 n n 
C2B C3B HEM doub 200 n n 
C2B CMB HEM sing 201 n n 
C3B C4B HEM sing 202 n n 
C3B CAB HEM sing 203 n n 
C4B NB HEM doub 204 n n 
CMB HMB HEM sing 205 n n 
CMB HMBA HEM sing 206 n n 
CMB HMBB HEM sing 207 n n 
CAB CBB HEM doub 208 n n 
CAB HAB HEM sing 209 n n 
CBB HBB HEM sing 210 n n 
CBB HBBA HEM sing 211 n n 
C1C C2C HEM sing 212 n y 
C1C NC HEM sing 213 n y 
C2C C3C HEM doub 214 n y 
C2C CMC HEM sing 215 n n 
C3C C4C HEM sing 216 n y 
C3C CAC HEM sing 217 n n 
C4C NC HEM sing 218 n y 
CMC HMC HEM sing 219 n n 
CMC HMCA HEM sing 220 n n 
CMC HMCB HEM sing 221 n n 
CAC CBC HEM doub 222 n n 
CAC HAC HEM sing 223 n n 
CBC HBC HEM sing 224 n n 
CBC HBCA HEM sing 225 n n 
C1D C2D HEM sing 226 n n 
C1D ND HEM doub 227 n n 
C2D C3D HEM doub 228 n n 
C2D CMD HEM sing 229 n n 
C3D C4D HEM sing 230 n n 
C3D CAD HEM sing 231 n n 
C4D ND HEM sing 232 n n 
CMD HMD HEM sing 233 n n 
CMD HMDA HEM sing 234 n n 
CMD HMDB HEM sing 235 n n 
CAD CBD HEM sing 236 n n 
CAD HAD HEM sing 237 n n 
CAD HADA HEM sing 238 n n 
CBD CGD HEM sing 239 n n 
CBD HBD HEM sing 240 n n 
CBD HBDA HEM sing 241 n n 
CGD O1D HEM doub 242 n n 
CGD O2D HEM sing 243 n n 
O2A H2A HEM sing 244 n n 
O2D H2D HEM sing 245 n n 
FE NA HEM sing 246 n n 
FE NB HEM sing 247 n n 
FE NC HEM sing 248 n n 
FE ND HEM sing 249 n n 
#
_atom_sites.entry_id                     7SJB 
_atom_sites.fract_transf_matrix[1][1]    0.01647 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014808 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014828 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 201 139 HEM HEM . 
D 3 9MI A 1 202 140 9MI AT2 . 
E 4 SO4 A 1 203 1 SO4 SO4 . 
F 4 SO4 A 1 204 2 SO4 SO4 . 
G 2 HEM B 1 201 139 HEM HEM . 
H 3 9MI B 1 202 140 9MI AT2 . 
I 5 GOL B 1 203 141 GOL GOL . 
J 6 HOH A 1 301 107 HOH HOH . 
J 6 HOH A 2 302 94 HOH HOH . 
J 6 HOH A 3 303 104 HOH HOH . 
J 6 HOH A 4 304 56 HOH HOH . 
J 6 HOH A 5 305 103 HOH HOH . 
J 6 HOH A 6 306 38 HOH HOH . 
J 6 HOH A 7 307 25 HOH HOH . 
J 6 HOH A 8 308 63 HOH HOH . 
J 6 HOH A 9 309 33 HOH HOH . 
J 6 HOH A 10 310 28 HOH HOH . 
J 6 HOH A 11 311 11 HOH HOH . 
J 6 HOH A 12 312 92 HOH HOH . 
J 6 HOH A 13 313 6 HOH HOH . 
J 6 HOH A 14 314 29 HOH HOH . 
J 6 HOH A 15 315 44 HOH HOH . 
J 6 HOH A 16 316 64 HOH HOH . 
J 6 HOH A 17 317 66 HOH HOH . 
J 6 HOH A 18 318 62 HOH HOH . 
J 6 HOH A 19 319 2 HOH HOH . 
J 6 HOH A 20 320 32 HOH HOH . 
J 6 HOH A 21 321 46 HOH HOH . 
J 6 HOH A 22 322 19 HOH HOH . 
J 6 HOH A 23 323 1 HOH HOH . 
J 6 HOH A 24 324 35 HOH HOH . 
J 6 HOH A 25 325 47 HOH HOH . 
J 6 HOH A 26 326 7 HOH HOH . 
J 6 HOH A 27 327 13 HOH HOH . 
J 6 HOH A 28 328 37 HOH HOH . 
J 6 HOH A 29 329 41 HOH HOH . 
J 6 HOH A 30 330 15 HOH HOH . 
J 6 HOH A 31 331 27 HOH HOH . 
J 6 HOH A 32 332 83 HOH HOH . 
J 6 HOH A 33 333 100 HOH HOH . 
J 6 HOH A 34 334 5 HOH HOH . 
J 6 HOH A 35 335 20 HOH HOH . 
J 6 HOH A 36 336 45 HOH HOH . 
J 6 HOH A 37 337 102 HOH HOH . 
J 6 HOH A 38 338 73 HOH HOH . 
J 6 HOH A 39 339 88 HOH HOH . 
J 6 HOH A 40 340 80 HOH HOH . 
J 6 HOH A 41 341 68 HOH HOH . 
J 6 HOH A 42 342 105 HOH HOH . 
J 6 HOH A 43 343 39 HOH HOH . 
J 6 HOH A 44 344 3 HOH HOH . 
J 6 HOH A 45 345 81 HOH HOH . 
J 6 HOH A 46 346 65 HOH HOH . 
J 6 HOH A 47 347 77 HOH HOH . 
J 6 HOH A 48 348 101 HOH HOH . 
J 6 HOH A 49 349 24 HOH HOH . 
J 6 HOH A 50 350 52 HOH HOH . 
J 6 HOH A 51 351 26 HOH HOH . 
J 6 HOH A 52 352 23 HOH HOH . 
J 6 HOH A 53 353 76 HOH HOH . 
J 6 HOH A 54 354 82 HOH HOH . 
J 6 HOH A 55 355 99 HOH HOH . 
J 6 HOH A 56 356 61 HOH HOH . 
J 6 HOH A 57 357 71 HOH HOH . 
K 6 HOH B 1 301 89 HOH HOH . 
K 6 HOH B 2 302 8 HOH HOH . 
K 6 HOH B 3 303 75 HOH HOH . 
K 6 HOH B 4 304 67 HOH HOH . 
K 6 HOH B 5 305 55 HOH HOH . 
K 6 HOH B 6 306 51 HOH HOH . 
K 6 HOH B 7 307 106 HOH HOH . 
K 6 HOH B 8 308 90 HOH HOH . 
K 6 HOH B 9 309 53 HOH HOH . 
K 6 HOH B 10 310 31 HOH HOH . 
K 6 HOH B 11 311 34 HOH HOH . 
K 6 HOH B 12 312 49 HOH HOH . 
K 6 HOH B 13 313 60 HOH HOH . 
K 6 HOH B 14 314 17 HOH HOH . 
K 6 HOH B 15 315 97 HOH HOH . 
K 6 HOH B 16 316 4 HOH HOH . 
K 6 HOH B 17 317 18 HOH HOH . 
K 6 HOH B 18 318 30 HOH HOH . 
K 6 HOH B 19 319 22 HOH HOH . 
K 6 HOH B 20 320 9 HOH HOH . 
K 6 HOH B 21 321 40 HOH HOH . 
K 6 HOH B 22 322 16 HOH HOH . 
K 6 HOH B 23 323 78 HOH HOH . 
K 6 HOH B 24 324 21 HOH HOH . 
K 6 HOH B 25 325 57 HOH HOH . 
K 6 HOH B 26 326 58 HOH HOH . 
K 6 HOH B 27 327 59 HOH HOH . 
K 6 HOH B 28 328 36 HOH HOH . 
K 6 HOH B 29 329 14 HOH HOH . 
K 6 HOH B 30 330 95 HOH HOH . 
K 6 HOH B 31 331 50 HOH HOH . 
K 6 HOH B 32 332 79 HOH HOH . 
K 6 HOH B 33 333 12 HOH HOH . 
K 6 HOH B 34 334 86 HOH HOH . 
K 6 HOH B 35 335 42 HOH HOH . 
K 6 HOH B 36 336 108 HOH HOH . 
K 6 HOH B 37 337 54 HOH HOH . 
K 6 HOH B 38 338 87 HOH HOH . 
K 6 HOH B 39 339 48 HOH HOH . 
K 6 HOH B 40 340 70 HOH HOH . 
K 6 HOH B 41 341 69 HOH HOH . 
K 6 HOH B 42 342 10 HOH HOH . 
K 6 HOH B 43 343 98 HOH HOH . 
K 6 HOH B 44 344 43 HOH HOH . 
K 6 HOH B 45 345 85 HOH HOH . 
K 6 HOH B 46 346 72 HOH HOH . 
K 6 HOH B 47 347 74 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 2 -20.413 -5.314 -23.259 1 29.81 0 CHA HEM 201 A 1 
HETATM 2 C CHB HEM . . . C 2 -19.073 -0.753 -24.338 1 30.96 0 CHB HEM 201 A 1 
HETATM 3 C CHC HEM . . . C 2 -23.222 0.87 -22.509 1 33.85 0 CHC HEM 201 A 1 
HETATM 4 C CHD HEM . . . C 2 -24.656 -3.662 -21.708 1 34.7 0 CHD HEM 201 A 1 
HETATM 5 C C1A HEM . . . C 2 -19.667 -4.188 -23.645 1 32.68 0 C1A HEM 201 A 1 
HETATM 6 C C2A HEM . . . C 2 -18.296 -4.214 -24.044 1 29.9 0 C2A HEM 201 A 1 
HETATM 7 C C3A HEM . . . C 2 -17.923 -2.933 -24.381 1 29.1 0 C3A HEM 201 A 1 
HETATM 8 C C4A HEM . . . C 2 -19.055 -2.118 -24.152 1 32.4 0 C4A HEM 201 A 1 
HETATM 9 C CMA HEM . . . C 2 -16.577 -2.475 -24.845 1 31.14 0 CMA HEM 201 A 1 
HETATM 10 C CAA HEM . . . C 2 -17.371 -5.419 -24.152 1 32.63 0 CAA HEM 201 A 1 
HETATM 11 C CBA HEM . . . C 2 -16.829 -5.756 -22.753 1 34.46 0 CBA HEM 201 A 1 
HETATM 12 C CGA HEM . . . C 2 -16.055 -7.061 -22.687 1 47.38 0 CGA HEM 201 A 1 
HETATM 13 O O1A HEM . . . C 2 -14.862 -7.06 -22.321 1 44.1 0 O1A HEM 201 A 1 
HETATM 14 O O2A HEM . . . C 2 -16.648 -8.122 -22.949 1 43.32 0 O2A HEM 201 A 1 
HETATM 15 C C1B HEM . . . C 2 -20.09 0.093 -23.92 1 30.12 0 C1B HEM 201 A 1 
HETATM 16 C C2B HEM . . . C 2 -20.036 1.536 -23.958 1 32.41 0 C2B HEM 201 A 1 
HETATM 17 C C3B HEM . . . C 2 -21.197 2.047 -23.428 1 32.35 0 C3B HEM 201 A 1 
HETATM 18 C C4B HEM . . . C 2 -21.979 0.812 -23.083 1 33.57 0 C4B HEM 201 A 1 
HETATM 19 C CMB HEM . . . C 2 -18.894 2.35 -24.447 1 31.68 0 CMB HEM 201 A 1 
HETATM 20 C CAB HEM . . . C 2 -21.674 3.448 -23.261 1 32.29 0 CAB HEM 201 A 1 
HETATM 21 C CBB HEM . . . C 2 -21.154 4.523 -23.885 1 33.2 0 CBB HEM 201 A 1 
HETATM 22 C C1C HEM . . . C 2 -23.967 -0.213 -22.092 1 32.95 0 C1C HEM 201 A 1 
HETATM 23 C C2C HEM . . . C 2 -25.212 -0.132 -21.418 1 33.81 0 C2C HEM 201 A 1 
HETATM 24 C C3C HEM . . . C 2 -25.632 -1.457 -21.202 1 35.28 0 C3C HEM 201 A 1 
HETATM 25 C C4C HEM . . . C 2 -24.603 -2.291 -21.733 1 34.69 0 C4C HEM 201 A 1 
HETATM 26 C CMC HEM . . . C 2 -25.912 1.151 -21.042 1 38.06 0 CMC HEM 201 A 1 
HETATM 27 C CAC HEM . . . C 2 -26.806 -2.005 -20.467 1 38.49 0 CAC HEM 201 A 1 
HETATM 28 C CBC HEM . . . C 2 -27.54 -1.273 -19.645 1 37.35 0 CBC HEM 201 A 1 
HETATM 29 C C1D HEM . . . C 2 -23.57 -4.452 -22.088 1 33.57 0 C1D HEM 201 A 1 
HETATM 30 C C2D HEM . . . C 2 -23.644 -5.913 -21.881 1 31.72 0 C2D HEM 201 A 1 
HETATM 31 C C3D HEM . . . C 2 -22.441 -6.414 -22.257 1 29.21 0 C3D HEM 201 A 1 
HETATM 32 C C4D HEM . . . C 2 -21.678 -5.206 -22.76 1 31.68 0 C4D HEM 201 A 1 
HETATM 33 C CMD HEM . . . C 2 -24.818 -6.671 -21.287 1 31.78 0 CMD HEM 201 A 1 
HETATM 34 C CAD HEM . . . C 2 -21.974 -7.897 -22.298 1 33.08 0 CAD HEM 201 A 1 
HETATM 35 C CBD HEM . . . C 2 -22.077 -8.646 -21 1 34.02 0 CBD HEM 201 A 1 
HETATM 36 C CGD HEM . . . C 2 -21.104 -8.102 -20.018 1 40.36 0 CGD HEM 201 A 1 
HETATM 37 O O1D HEM . . . C 2 -20.097 -7.517 -20.503 1 43.46 0 O1D HEM 201 A 1 
HETATM 38 O O2D HEM . . . C 2 -21.278 -8.157 -18.784 0.2 29.25 0 O2D HEM 201 A 1 
HETATM 39 N NA HEM . . . C 2 -20.119 -2.886 -23.689 1 30.52 0 NA HEM 201 A 1 
HETATM 40 N NB HEM . . . C 2 -21.241 -0.26 -23.399 1 28.9 0 NB HEM 201 A 1 
HETATM 41 N NC HEM . . . C 2 -23.619 -1.513 -22.303 1 30.16 0 NC HEM 201 A 1 
HETATM 42 N ND HEM . . . C 2 -22.391 -4.057 -22.585 1 30.75 0 ND HEM 201 A 1 
HETATM 43 FE FE HEM . . . C 2 -21.887 -2.234 -23.159 1 30.88 0 FE HEM 201 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           17 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           315 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#