data_7SJD
#
_model_server_result.job_id            '_FSJc-_4Ry_k7vHgdrIPeQ' 
_model_server_result.datetime_utc      '2024-10-10 10:22:47' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7sjd 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":202}' 
#
_entry.id    7SJD 
#
_exptl.entry_id    7SJD 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              92.094 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            GLYCEROL 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7SJD 
_cell.length_a            59.711 
_cell.length_b            67.574 
_cell.length_c            67.856 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7SJD 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,L 1 1 
B,H,I,J,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 D N N 
? 3 I N N 
? 3 J N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.258 ? 
metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 H FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.23 ? 
#
_chem_comp.formula           'C3 H8 O3' 
_chem_comp.formula_weight    92.094 
_chem_comp.id                GOL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              GLYCEROL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GLYCERIN;PROPANE-1,2,3-TRIOL 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 GOL sing 155 n n 
C1 C2 GOL sing 156 n n 
C1 H11 GOL sing 157 n n 
C1 H12 GOL sing 158 n n 
O1 HO1 GOL sing 159 n n 
C2 O2 GOL sing 160 n n 
C2 C3 GOL sing 161 n n 
C2 H2 GOL sing 162 n n 
O2 HO2 GOL sing 163 n n 
C3 O3 GOL sing 164 n n 
C3 H31 GOL sing 165 n n 
C3 H32 GOL sing 166 n n 
O3 HO3 GOL sing 167 n n 
#
_atom_sites.entry_id                     7SJD 
_atom_sites.fract_transf_matrix[1][1]    0.016747 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014799 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014737 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 201 139 HEM HEM . 
D 3 GOL A 1 202 141 GOL GOL . 
E 4 9LR A 1 203 142 9LR TN2 . 
F 5 SO4 A 1 204 1 SO4 SO4 . 
G 5 SO4 A 1 205 2 SO4 SO4 . 
H 2 HEM B 1 201 139 HEM HEM . 
I 3 GOL B 1 202 141 GOL GOL . 
J 3 GOL B 1 203 142 GOL GOL . 
K 4 9LR B 1 204 143 9LR TN2 . 
L 6 HOH A 1 301 117 HOH HOH . 
L 6 HOH A 2 302 1 HOH HOH . 
L 6 HOH A 3 303 89 HOH HOH . 
L 6 HOH A 4 304 6 HOH HOH . 
L 6 HOH A 5 305 90 HOH HOH . 
L 6 HOH A 6 306 2 HOH HOH . 
L 6 HOH A 7 307 44 HOH HOH . 
L 6 HOH A 8 308 46 HOH HOH . 
L 6 HOH A 9 309 99 HOH HOH . 
L 6 HOH A 10 310 32 HOH HOH . 
L 6 HOH A 11 311 39 HOH HOH . 
L 6 HOH A 12 312 112 HOH HOH . 
L 6 HOH A 13 313 53 HOH HOH . 
L 6 HOH A 14 314 12 HOH HOH . 
L 6 HOH A 15 315 3 HOH HOH . 
L 6 HOH A 16 316 40 HOH HOH . 
L 6 HOH A 17 317 21 HOH HOH . 
L 6 HOH A 18 318 38 HOH HOH . 
L 6 HOH A 19 319 74 HOH HOH . 
L 6 HOH A 20 320 24 HOH HOH . 
L 6 HOH A 21 321 5 HOH HOH . 
L 6 HOH A 22 322 56 HOH HOH . 
L 6 HOH A 23 323 4 HOH HOH . 
L 6 HOH A 24 324 96 HOH HOH . 
L 6 HOH A 25 325 22 HOH HOH . 
L 6 HOH A 26 326 18 HOH HOH . 
L 6 HOH A 27 327 15 HOH HOH . 
L 6 HOH A 28 328 102 HOH HOH . 
L 6 HOH A 29 329 66 HOH HOH . 
L 6 HOH A 30 330 10 HOH HOH . 
L 6 HOH A 31 331 20 HOH HOH . 
L 6 HOH A 32 332 119 HOH HOH . 
L 6 HOH A 33 333 16 HOH HOH . 
L 6 HOH A 34 334 72 HOH HOH . 
L 6 HOH A 35 335 98 HOH HOH . 
L 6 HOH A 36 336 73 HOH HOH . 
L 6 HOH A 37 337 108 HOH HOH . 
L 6 HOH A 38 338 31 HOH HOH . 
L 6 HOH A 39 339 116 HOH HOH . 
L 6 HOH A 40 340 60 HOH HOH . 
L 6 HOH A 41 341 19 HOH HOH . 
L 6 HOH A 42 342 91 HOH HOH . 
L 6 HOH A 43 343 68 HOH HOH . 
L 6 HOH A 44 344 54 HOH HOH . 
L 6 HOH A 45 345 118 HOH HOH . 
L 6 HOH A 46 346 94 HOH HOH . 
L 6 HOH A 47 347 80 HOH HOH . 
L 6 HOH A 48 348 70 HOH HOH . 
L 6 HOH A 49 349 81 HOH HOH . 
L 6 HOH A 50 350 92 HOH HOH . 
L 6 HOH A 51 351 115 HOH HOH . 
L 6 HOH A 52 352 114 HOH HOH . 
L 6 HOH A 53 353 88 HOH HOH . 
M 6 HOH B 1 301 63 HOH HOH . 
M 6 HOH B 2 302 41 HOH HOH . 
M 6 HOH B 3 303 76 HOH HOH . 
M 6 HOH B 4 304 47 HOH HOH . 
M 6 HOH B 5 305 82 HOH HOH . 
M 6 HOH B 6 306 110 HOH HOH . 
M 6 HOH B 7 307 48 HOH HOH . 
M 6 HOH B 8 308 13 HOH HOH . 
M 6 HOH B 9 309 7 HOH HOH . 
M 6 HOH B 10 310 35 HOH HOH . 
M 6 HOH B 11 311 71 HOH HOH . 
M 6 HOH B 12 312 37 HOH HOH . 
M 6 HOH B 13 313 51 HOH HOH . 
M 6 HOH B 14 314 95 HOH HOH . 
M 6 HOH B 15 315 62 HOH HOH . 
M 6 HOH B 16 316 17 HOH HOH . 
M 6 HOH B 17 317 33 HOH HOH . 
M 6 HOH B 18 318 61 HOH HOH . 
M 6 HOH B 19 319 55 HOH HOH . 
M 6 HOH B 20 320 27 HOH HOH . 
M 6 HOH B 21 321 59 HOH HOH . 
M 6 HOH B 22 322 30 HOH HOH . 
M 6 HOH B 23 323 111 HOH HOH . 
M 6 HOH B 24 324 43 HOH HOH . 
M 6 HOH B 25 325 79 HOH HOH . 
M 6 HOH B 26 326 106 HOH HOH . 
M 6 HOH B 27 327 42 HOH HOH . 
M 6 HOH B 28 328 77 HOH HOH . 
M 6 HOH B 29 329 23 HOH HOH . 
M 6 HOH B 30 330 14 HOH HOH . 
M 6 HOH B 31 331 93 HOH HOH . 
M 6 HOH B 32 332 9 HOH HOH . 
M 6 HOH B 33 333 57 HOH HOH . 
M 6 HOH B 34 334 64 HOH HOH . 
M 6 HOH B 35 335 67 HOH HOH . 
M 6 HOH B 36 336 25 HOH HOH . 
M 6 HOH B 37 337 11 HOH HOH . 
M 6 HOH B 38 338 100 HOH HOH . 
M 6 HOH B 39 339 75 HOH HOH . 
M 6 HOH B 40 340 83 HOH HOH . 
M 6 HOH B 41 341 28 HOH HOH . 
M 6 HOH B 42 342 36 HOH HOH . 
M 6 HOH B 43 343 65 HOH HOH . 
M 6 HOH B 44 344 58 HOH HOH . 
M 6 HOH B 45 345 107 HOH HOH . 
M 6 HOH B 46 346 26 HOH HOH . 
M 6 HOH B 47 347 69 HOH HOH . 
M 6 HOH B 48 348 45 HOH HOH . 
M 6 HOH B 49 349 29 HOH HOH . 
M 6 HOH B 50 350 103 HOH HOH . 
M 6 HOH B 51 351 78 HOH HOH . 
M 6 HOH B 52 352 34 HOH HOH . 
M 6 HOH B 53 353 49 HOH HOH . 
M 6 HOH B 54 354 50 HOH HOH . 
M 6 HOH B 55 355 84 HOH HOH . 
M 6 HOH B 56 356 87 HOH HOH . 
M 6 HOH B 57 357 86 HOH HOH . 
M 6 HOH B 58 358 85 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 GOL . . . D 3 -6.703 -14.082 24.173 1 49.85 0 C1 GOL 202 A 1 
HETATM 2 O O1 GOL . . . D 3 -5.743 -14.609 25.083 1 44.79 0 O1 GOL 202 A 1 
HETATM 3 C C2 GOL . . . D 3 -6.723 -12.567 24.209 1 45.94 0 C2 GOL 202 A 1 
HETATM 4 O O2 GOL . . . D 3 -8.064 -12.08 24.132 1 37.64 0 O2 GOL 202 A 1 
HETATM 5 C C3 GOL . . . D 3 -6.055 -12.034 25.455 1 44.21 0 C3 GOL 202 A 1 
HETATM 6 O O3 GOL . . . D 3 -6.11 -10.615 25.501 1 31.71 0 O3 GOL 202 A 1 
#
_model_server_stats.io_time_ms              10 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    3 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           6 
#