data_7SJH # _model_server_result.job_id plmOrSDbkmc32UM-VQW65g _model_server_result.datetime_utc '2024-11-23 23:58:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sjh # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"N","auth_seq_id":204}' # _entry.id 7SJH # _exptl.entry_id 7SJH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SJH _cell.length_a 59.839 _cell.length_b 67.375 _cell.length_c 67.857 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SJH _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,J,O 1 1 B,K,L,M,N,P 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 G N N ? 4 H N N ? 4 M N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.282 ? metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 K FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc3 K FE HEM . B HEM 201 1_555 P O HOH . B HOH 324 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.61 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 155 n n C1 C2 GOL sing 156 n n C1 H11 GOL sing 157 n n C1 H12 GOL sing 158 n n O1 HO1 GOL sing 159 n n C2 O2 GOL sing 160 n n C2 C3 GOL sing 161 n n C2 H2 GOL sing 162 n n O2 HO2 GOL sing 163 n n C3 O3 GOL sing 164 n n C3 H31 GOL sing 165 n n C3 H32 GOL sing 166 n n O3 HO3 GOL sing 167 n n # _atom_sites.entry_id 7SJH _atom_sites.fract_transf_matrix[1][1] 0.016712 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014842 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014737 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 201 139 HEM HEM . D 3 9IU A 1 202 140 9IU SL2 . E 4 GOL A 1 203 141 GOL GOL . F 4 GOL A 1 204 142 GOL GOL . G 4 GOL A 1 205 143 GOL GOL . H 4 GOL A 1 206 144 GOL GOL . I 5 SO4 A 1 207 1 SO4 SO4 . J 5 SO4 A 1 208 2 SO4 SO4 . K 2 HEM B 1 201 139 HEM HEM . L 3 9IU B 1 202 140 9IU SL2 . M 4 GOL B 1 203 141 GOL GOL . N 4 GOL B 1 204 142 GOL GOL . O 6 HOH A 1 301 1 HOH HOH . O 6 HOH A 2 302 91 HOH HOH . O 6 HOH A 3 303 100 HOH HOH . O 6 HOH A 4 304 92 HOH HOH . O 6 HOH A 5 305 68 HOH HOH . O 6 HOH A 6 306 78 HOH HOH . O 6 HOH A 7 307 52 HOH HOH . O 6 HOH A 8 308 49 HOH HOH . O 6 HOH A 9 309 25 HOH HOH . O 6 HOH A 10 310 99 HOH HOH . O 6 HOH A 11 311 75 HOH HOH . O 6 HOH A 12 312 72 HOH HOH . O 6 HOH A 13 313 96 HOH HOH . O 6 HOH A 14 314 15 HOH HOH . O 6 HOH A 15 315 14 HOH HOH . O 6 HOH A 16 316 7 HOH HOH . O 6 HOH A 17 317 84 HOH HOH . O 6 HOH A 18 318 10 HOH HOH . O 6 HOH A 19 319 70 HOH HOH . O 6 HOH A 20 320 31 HOH HOH . O 6 HOH A 21 321 45 HOH HOH . O 6 HOH A 22 322 18 HOH HOH . O 6 HOH A 23 323 102 HOH HOH . O 6 HOH A 24 324 77 HOH HOH . O 6 HOH A 25 325 110 HOH HOH . O 6 HOH A 26 326 57 HOH HOH . O 6 HOH A 27 327 19 HOH HOH . O 6 HOH A 28 328 94 HOH HOH . O 6 HOH A 29 329 23 HOH HOH . O 6 HOH A 30 330 69 HOH HOH . O 6 HOH A 31 331 89 HOH HOH . O 6 HOH A 32 332 81 HOH HOH . O 6 HOH A 33 333 13 HOH HOH . O 6 HOH A 34 334 104 HOH HOH . O 6 HOH A 35 335 24 HOH HOH . O 6 HOH A 36 336 103 HOH HOH . O 6 HOH A 37 337 86 HOH HOH . O 6 HOH A 38 338 98 HOH HOH . O 6 HOH A 39 339 27 HOH HOH . O 6 HOH A 40 340 88 HOH HOH . O 6 HOH A 41 341 54 HOH HOH . O 6 HOH A 42 342 29 HOH HOH . O 6 HOH A 43 343 32 HOH HOH . O 6 HOH A 44 344 97 HOH HOH . O 6 HOH A 45 345 101 HOH HOH . O 6 HOH A 46 346 82 HOH HOH . O 6 HOH A 47 347 59 HOH HOH . O 6 HOH A 48 348 93 HOH HOH . O 6 HOH A 49 349 95 HOH HOH . O 6 HOH A 50 350 73 HOH HOH . P 6 HOH B 1 301 65 HOH HOH . P 6 HOH B 2 302 2 HOH HOH . P 6 HOH B 3 303 117 HOH HOH . P 6 HOH B 4 304 20 HOH HOH . P 6 HOH B 5 305 26 HOH HOH . P 6 HOH B 6 306 115 HOH HOH . P 6 HOH B 7 307 116 HOH HOH . P 6 HOH B 8 308 46 HOH HOH . P 6 HOH B 9 309 105 HOH HOH . P 6 HOH B 10 310 4 HOH HOH . P 6 HOH B 11 311 114 HOH HOH . P 6 HOH B 12 312 79 HOH HOH . P 6 HOH B 13 313 17 HOH HOH . P 6 HOH B 14 314 34 HOH HOH . P 6 HOH B 15 315 56 HOH HOH . P 6 HOH B 16 316 51 HOH HOH . P 6 HOH B 17 317 38 HOH HOH . P 6 HOH B 18 318 64 HOH HOH . P 6 HOH B 19 319 30 HOH HOH . P 6 HOH B 20 320 85 HOH HOH . P 6 HOH B 21 321 83 HOH HOH . P 6 HOH B 22 322 22 HOH HOH . P 6 HOH B 23 323 108 HOH HOH . P 6 HOH B 24 324 113 HOH HOH . P 6 HOH B 25 325 40 HOH HOH . P 6 HOH B 26 326 35 HOH HOH . P 6 HOH B 27 327 8 HOH HOH . P 6 HOH B 28 328 36 HOH HOH . P 6 HOH B 29 329 53 HOH HOH . P 6 HOH B 30 330 60 HOH HOH . P 6 HOH B 31 331 37 HOH HOH . P 6 HOH B 32 332 28 HOH HOH . P 6 HOH B 33 333 42 HOH HOH . P 6 HOH B 34 334 71 HOH HOH . P 6 HOH B 35 335 44 HOH HOH . P 6 HOH B 36 336 47 HOH HOH . P 6 HOH B 37 337 3 HOH HOH . P 6 HOH B 38 338 6 HOH HOH . P 6 HOH B 39 339 50 HOH HOH . P 6 HOH B 40 340 66 HOH HOH . P 6 HOH B 41 341 55 HOH HOH . P 6 HOH B 42 342 63 HOH HOH . P 6 HOH B 43 343 111 HOH HOH . P 6 HOH B 44 344 39 HOH HOH . P 6 HOH B 45 345 41 HOH HOH . P 6 HOH B 46 346 48 HOH HOH . P 6 HOH B 47 347 109 HOH HOH . P 6 HOH B 48 348 11 HOH HOH . P 6 HOH B 49 349 107 HOH HOH . P 6 HOH B 50 350 33 HOH HOH . P 6 HOH B 51 351 87 HOH HOH . P 6 HOH B 52 352 106 HOH HOH . P 6 HOH B 53 353 90 HOH HOH . P 6 HOH B 54 354 43 HOH HOH . P 6 HOH B 55 355 118 HOH HOH . P 6 HOH B 56 356 21 HOH HOH . P 6 HOH B 57 357 16 HOH HOH . P 6 HOH B 58 358 80 HOH HOH . P 6 HOH B 59 359 62 HOH HOH . P 6 HOH B 60 360 112 HOH HOH . P 6 HOH B 61 361 74 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . N 4 -34.838 9.452 -17.031 1 74.03 0 C1 GOL 204 B 1 HETATM 2 O O1 GOL . . . N 4 -33.513 9.019 -17.321 1 73.44 0 O1 GOL 204 B 1 HETATM 3 C C2 GOL . . . N 4 -35.719 8.293 -16.615 1 76.05 0 C2 GOL 204 B 1 HETATM 4 O O2 GOL . . . N 4 -37.064 8.539 -17.02 1 75.13 0 O2 GOL 204 B 1 HETATM 5 C C3 GOL . . . N 4 -35.275 6.956 -17.173 1 76.82 0 C3 GOL 204 B 1 HETATM 6 O O3 GOL . . . N 4 -34.854 7.042 -18.533 1 67.58 0 O3 GOL 204 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 17 _model_server_stats.query_time_ms 295 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 6 #