data_7SJI
#
_model_server_result.job_id            PUfVkNt4z3_fJ_R0NPouFg 
_model_server_result.datetime_utc      '2024-11-15 09:53:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7sji 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":201}' 
#
_entry.id    7SJI 
#
_exptl.entry_id    7SJI 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7SJI 
_cell.length_a            59.775 
_cell.length_b            66.988 
_cell.length_c            67.759 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7SJI 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,D,E,F,G,H,L 1 1 
B,I,J,K,M 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 I N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? 
metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 I FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 168 n n 
CHA C4D HEM doub 169 n n 
CHA HHA HEM sing 170 n n 
CHB C4A HEM sing 171 n n 
CHB C1B HEM doub 172 n n 
CHB HHB HEM sing 173 n n 
CHC C4B HEM sing 174 n n 
CHC C1C HEM doub 175 n n 
CHC HHC HEM sing 176 n n 
CHD C4C HEM doub 177 n n 
CHD C1D HEM sing 178 n n 
CHD HHD HEM sing 179 n n 
C1A C2A HEM doub 180 n y 
C1A NA HEM sing 181 n y 
C2A C3A HEM sing 182 n y 
C2A CAA HEM sing 183 n n 
C3A C4A HEM doub 184 n y 
C3A CMA HEM sing 185 n n 
C4A NA HEM sing 186 n y 
CMA HMA HEM sing 187 n n 
CMA HMAA HEM sing 188 n n 
CMA HMAB HEM sing 189 n n 
CAA CBA HEM sing 190 n n 
CAA HAA HEM sing 191 n n 
CAA HAAA HEM sing 192 n n 
CBA CGA HEM sing 193 n n 
CBA HBA HEM sing 194 n n 
CBA HBAA HEM sing 195 n n 
CGA O1A HEM doub 196 n n 
CGA O2A HEM sing 197 n n 
C1B C2B HEM sing 198 n n 
C1B NB HEM sing 199 n n 
C2B C3B HEM doub 200 n n 
C2B CMB HEM sing 201 n n 
C3B C4B HEM sing 202 n n 
C3B CAB HEM sing 203 n n 
C4B NB HEM doub 204 n n 
CMB HMB HEM sing 205 n n 
CMB HMBA HEM sing 206 n n 
CMB HMBB HEM sing 207 n n 
CAB CBB HEM doub 208 n n 
CAB HAB HEM sing 209 n n 
CBB HBB HEM sing 210 n n 
CBB HBBA HEM sing 211 n n 
C1C C2C HEM sing 212 n y 
C1C NC HEM sing 213 n y 
C2C C3C HEM doub 214 n y 
C2C CMC HEM sing 215 n n 
C3C C4C HEM sing 216 n y 
C3C CAC HEM sing 217 n n 
C4C NC HEM sing 218 n y 
CMC HMC HEM sing 219 n n 
CMC HMCA HEM sing 220 n n 
CMC HMCB HEM sing 221 n n 
CAC CBC HEM doub 222 n n 
CAC HAC HEM sing 223 n n 
CBC HBC HEM sing 224 n n 
CBC HBCA HEM sing 225 n n 
C1D C2D HEM sing 226 n n 
C1D ND HEM doub 227 n n 
C2D C3D HEM doub 228 n n 
C2D CMD HEM sing 229 n n 
C3D C4D HEM sing 230 n n 
C3D CAD HEM sing 231 n n 
C4D ND HEM sing 232 n n 
CMD HMD HEM sing 233 n n 
CMD HMDA HEM sing 234 n n 
CMD HMDB HEM sing 235 n n 
CAD CBD HEM sing 236 n n 
CAD HAD HEM sing 237 n n 
CAD HADA HEM sing 238 n n 
CBD CGD HEM sing 239 n n 
CBD HBD HEM sing 240 n n 
CBD HBDA HEM sing 241 n n 
CGD O1D HEM doub 242 n n 
CGD O2D HEM sing 243 n n 
O2A H2A HEM sing 244 n n 
O2D H2D HEM sing 245 n n 
FE NA HEM sing 246 n n 
FE NB HEM sing 247 n n 
FE NC HEM sing 248 n n 
FE ND HEM sing 249 n n 
#
_atom_sites.entry_id                     7SJI 
_atom_sites.fract_transf_matrix[1][1]    0.016729 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014928 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014758 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 HEM A 1 201 139 HEM HEM . 
D 3 9IR A 1 202 140 9IR RL1 . 
E 4 GOL A 1 203 141 GOL GOL . 
F 4 GOL A 1 204 142 GOL GOL . 
G 5 SO4 A 1 205 1 SO4 SO4 . 
H 5 SO4 A 1 206 2 SO4 SO4 . 
I 2 HEM B 1 201 139 HEM HEM . 
J 3 9IR B 1 202 140 9IR RL1 . 
K 4 GOL B 1 203 141 GOL GOL . 
L 6 HOH A 1 301 83 HOH HOH . 
L 6 HOH A 2 302 84 HOH HOH . 
L 6 HOH A 3 303 36 HOH HOH . 
L 6 HOH A 4 304 82 HOH HOH . 
L 6 HOH A 5 305 85 HOH HOH . 
L 6 HOH A 6 306 29 HOH HOH . 
L 6 HOH A 7 307 76 HOH HOH . 
L 6 HOH A 8 308 52 HOH HOH . 
L 6 HOH A 9 309 28 HOH HOH . 
L 6 HOH A 10 310 62 HOH HOH . 
L 6 HOH A 11 311 24 HOH HOH . 
L 6 HOH A 12 312 15 HOH HOH . 
L 6 HOH A 13 313 11 HOH HOH . 
L 6 HOH A 14 314 12 HOH HOH . 
L 6 HOH A 15 315 43 HOH HOH . 
L 6 HOH A 16 316 8 HOH HOH . 
L 6 HOH A 17 317 30 HOH HOH . 
L 6 HOH A 18 318 88 HOH HOH . 
L 6 HOH A 19 319 64 HOH HOH . 
L 6 HOH A 20 320 1 HOH HOH . 
L 6 HOH A 21 321 16 HOH HOH . 
L 6 HOH A 22 322 5 HOH HOH . 
L 6 HOH A 23 323 7 HOH HOH . 
L 6 HOH A 24 324 56 HOH HOH . 
L 6 HOH A 25 325 58 HOH HOH . 
L 6 HOH A 26 326 4 HOH HOH . 
L 6 HOH A 27 327 14 HOH HOH . 
L 6 HOH A 28 328 38 HOH HOH . 
L 6 HOH A 29 329 19 HOH HOH . 
L 6 HOH A 30 330 13 HOH HOH . 
L 6 HOH A 31 331 89 HOH HOH . 
L 6 HOH A 32 332 18 HOH HOH . 
L 6 HOH A 33 333 34 HOH HOH . 
L 6 HOH A 34 334 73 HOH HOH . 
L 6 HOH A 35 335 87 HOH HOH . 
L 6 HOH A 36 336 90 HOH HOH . 
L 6 HOH A 37 337 22 HOH HOH . 
L 6 HOH A 38 338 17 HOH HOH . 
L 6 HOH A 39 339 33 HOH HOH . 
L 6 HOH A 40 340 45 HOH HOH . 
M 6 HOH B 1 301 63 HOH HOH . 
M 6 HOH B 2 302 91 HOH HOH . 
M 6 HOH B 3 303 78 HOH HOH . 
M 6 HOH B 4 304 103 HOH HOH . 
M 6 HOH B 5 305 102 HOH HOH . 
M 6 HOH B 6 306 10 HOH HOH . 
M 6 HOH B 7 307 96 HOH HOH . 
M 6 HOH B 8 308 44 HOH HOH . 
M 6 HOH B 9 309 68 HOH HOH . 
M 6 HOH B 10 310 31 HOH HOH . 
M 6 HOH B 11 311 69 HOH HOH . 
M 6 HOH B 12 312 9 HOH HOH . 
M 6 HOH B 13 313 92 HOH HOH . 
M 6 HOH B 14 314 65 HOH HOH . 
M 6 HOH B 15 315 39 HOH HOH . 
M 6 HOH B 16 316 60 HOH HOH . 
M 6 HOH B 17 317 35 HOH HOH . 
M 6 HOH B 18 318 75 HOH HOH . 
M 6 HOH B 19 319 98 HOH HOH . 
M 6 HOH B 20 320 61 HOH HOH . 
M 6 HOH B 21 321 55 HOH HOH . 
M 6 HOH B 22 322 26 HOH HOH . 
M 6 HOH B 23 323 49 HOH HOH . 
M 6 HOH B 24 324 42 HOH HOH . 
M 6 HOH B 25 325 54 HOH HOH . 
M 6 HOH B 26 326 53 HOH HOH . 
M 6 HOH B 27 327 21 HOH HOH . 
M 6 HOH B 28 328 37 HOH HOH . 
M 6 HOH B 29 329 46 HOH HOH . 
M 6 HOH B 30 330 2 HOH HOH . 
M 6 HOH B 31 331 41 HOH HOH . 
M 6 HOH B 32 332 6 HOH HOH . 
M 6 HOH B 33 333 3 HOH HOH . 
M 6 HOH B 34 334 23 HOH HOH . 
M 6 HOH B 35 335 57 HOH HOH . 
M 6 HOH B 36 336 66 HOH HOH . 
M 6 HOH B 37 337 40 HOH HOH . 
M 6 HOH B 38 338 81 HOH HOH . 
M 6 HOH B 39 339 93 HOH HOH . 
M 6 HOH B 40 340 50 HOH HOH . 
M 6 HOH B 41 341 97 HOH HOH . 
M 6 HOH B 42 342 70 HOH HOH . 
M 6 HOH B 43 343 95 HOH HOH . 
M 6 HOH B 44 344 51 HOH HOH . 
M 6 HOH B 45 345 104 HOH HOH . 
M 6 HOH B 46 346 27 HOH HOH . 
M 6 HOH B 47 347 101 HOH HOH . 
M 6 HOH B 48 348 59 HOH HOH . 
M 6 HOH B 49 349 25 HOH HOH . 
M 6 HOH B 50 350 74 HOH HOH . 
M 6 HOH B 51 351 99 HOH HOH . 
M 6 HOH B 52 352 48 HOH HOH . 
M 6 HOH B 53 353 100 HOH HOH . 
M 6 HOH B 54 354 79 HOH HOH . 
M 6 HOH B 55 355 32 HOH HOH . 
M 6 HOH B 56 356 94 HOH HOH . 
M 6 HOH B 57 357 20 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . C 2 4.831 6.41 -11.169 1 37.88 0 CHA HEM 201 A 1 
HETATM 2 C CHB HEM . . . C 2 3.566 7.348 -15.779 1 46.64 0 CHB HEM 201 A 1 
HETATM 3 C CHC HEM . . . C 2 7.721 5.453 -17.329 1 46.92 0 CHC HEM 201 A 1 
HETATM 4 C CHD HEM . . . C 2 8.971 4.494 -12.756 1 44.69 0 CHD HEM 201 A 1 
HETATM 5 C C1A HEM . . . C 2 4.136 6.808 -12.299 1 45.61 0 C1A HEM 201 A 1 
HETATM 6 C C2A HEM . . . C 2 2.807 7.337 -12.331 1 49.2 0 C2A HEM 201 A 1 
HETATM 7 C C3A HEM . . . C 2 2.453 7.589 -13.619 1 47.69 0 C3A HEM 201 A 1 
HETATM 8 C C4A HEM . . . C 2 3.553 7.233 -14.41 1 44.99 0 C4A HEM 201 A 1 
HETATM 9 C CMA HEM . . . C 2 1.137 8.16 -14.121 1 49.77 0 CMA HEM 201 A 1 
HETATM 10 C CAA HEM . . . C 2 1.909 7.579 -11.164 1 59.22 0 CAA HEM 201 A 1 
HETATM 11 C CBA HEM . . . C 2 1.076 6.312 -10.918 1 68.46 0 CBA HEM 201 A 1 
HETATM 12 C CGA HEM . . . C 2 0.692 6.265 -9.459 1 77.92 0 CGA HEM 201 A 1 
HETATM 13 O O1A HEM . . . C 2 -0.513 6.416 -9.159 1 77.55 0 O1A HEM 201 A 1 
HETATM 14 O O2A HEM . . . C 2 1.579 6.09 -8.575 1 88.9 0 O2A HEM 201 A 1 
HETATM 15 C C1B HEM . . . C 2 4.61 6.9 -16.591 1 44.9 0 C1B HEM 201 A 1 
HETATM 16 C C2B HEM . . . C 2 4.556 6.983 -18.013 1 47.44 0 C2B HEM 201 A 1 
HETATM 17 C C3B HEM . . . C 2 5.718 6.451 -18.489 1 48.75 0 C3B HEM 201 A 1 
HETATM 18 C C4B HEM . . . C 2 6.463 6.041 -17.26 1 50.82 0 C4B HEM 201 A 1 
HETATM 19 C CMB HEM . . . C 2 3.418 7.551 -18.843 1 47.13 0 CMB HEM 201 A 1 
HETATM 20 C CAB HEM . . . C 2 6.199 6.312 -19.894 1 48.56 0 CAB HEM 201 A 1 
HETATM 21 C CBB HEM . . . C 2 5.565 6.799 -20.978 1 54.49 0 CBB HEM 201 A 1 
HETATM 22 C C1C HEM . . . C 2 8.412 5.019 -16.202 1 47.52 0 C1C HEM 201 A 1 
HETATM 23 C C2C HEM . . . C 2 9.638 4.314 -16.246 1 49.56 0 C2C HEM 201 A 1 
HETATM 24 C C3C HEM . . . C 2 10.004 4.025 -14.934 1 46.82 0 C3C HEM 201 A 1 
HETATM 25 C C4C HEM . . . C 2 8.966 4.556 -14.113 1 48.12 0 C4C HEM 201 A 1 
HETATM 26 C CMC HEM . . . C 2 10.387 3.956 -17.52 1 47.57 0 CMC HEM 201 A 1 
HETATM 27 C CAC HEM . . . C 2 11.201 3.288 -14.443 1 51.27 0 CAC HEM 201 A 1 
HETATM 28 C CBC HEM . . . C 2 12.061 2.647 -15.245 1 54.23 0 CBC HEM 201 A 1 
HETATM 29 C C1D HEM . . . C 2 7.914 4.968 -11.994 1 44.65 0 C1D HEM 201 A 1 
HETATM 30 C C2D HEM . . . C 2 7.959 4.787 -10.548 1 43.7 0 C2D HEM 201 A 1 
HETATM 31 C C3D HEM . . . C 2 6.811 5.312 -10.068 1 46.31 0 C3D HEM 201 A 1 
HETATM 32 C C4D HEM . . . C 2 6.067 5.827 -11.249 1 41.18 0 C4D HEM 201 A 1 
HETATM 33 C CMD HEM . . . C 2 9.104 4.152 -9.777 1 44.49 0 CMD HEM 201 A 1 
HETATM 34 C CAD HEM . . . C 2 6.374 5.335 -8.619 1 50.54 0 CAD HEM 201 A 1 
HETATM 35 C CBD HEM . . . C 2 6.672 4.021 -7.873 1 57.56 0 CBD HEM 201 A 1 
HETATM 36 C CGD HEM . . . C 2 5.472 3.118 -7.674 1 65.24 0 CGD HEM 201 A 1 
HETATM 37 O O1D HEM . . . C 2 4.994 2.927 -6.525 1 68.42 0 O1D HEM 201 A 1 
HETATM 38 O O2D HEM . . . C 2 4.955 2.534 -8.651 0.2 63.15 0 O2D HEM 201 A 1 
HETATM 39 N NA HEM . . . C 2 4.546 6.745 -13.598 1 45.25 0 NA HEM 201 A 1 
HETATM 40 N NB HEM . . . C 2 5.742 6.34 -16.159 1 50.02 0 NB HEM 201 A 1 
HETATM 41 N NC HEM . . . C 2 8.01 5.157 -14.904 1 44.3 0 NC HEM 201 A 1 
HETATM 42 N ND HEM . . . C 2 6.768 5.571 -12.387 1 41.65 0 ND HEM 201 A 1 
HETATM 43 FE FE HEM . . . C 2 6.281 6.02 -14.118 1 48.91 0 FE HEM 201 A 1 
#
_model_server_stats.io_time_ms              9 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           307 
_model_server_stats.encode_time_ms          6 
_model_server_stats.element_count           43 
#