data_7SJI # _model_server_result.job_id hY_pPEoH5tf1AQb9dTn31A _model_server_result.datetime_utc '2024-11-15 09:52:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sji # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":203}' # _entry.id 7SJI # _exptl.entry_id 7SJI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SJI _cell.length_a 59.775 _cell.length_b 66.988 _cell.length_c 67.759 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SJI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,L 1 1 B,I,J,K,M 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 F N N ? 4 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A NE2 HIS 89 A HIS 89 1_555 C FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.18 ? metalc ? metalc2 B NE2 HIS 89 B HIS 89 1_555 I FE HEM . B HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 155 n n C1 C2 GOL sing 156 n n C1 H11 GOL sing 157 n n C1 H12 GOL sing 158 n n O1 HO1 GOL sing 159 n n C2 O2 GOL sing 160 n n C2 C3 GOL sing 161 n n C2 H2 GOL sing 162 n n O2 HO2 GOL sing 163 n n C3 O3 GOL sing 164 n n C3 H31 GOL sing 165 n n C3 H32 GOL sing 166 n n O3 HO3 GOL sing 167 n n # _atom_sites.entry_id 7SJI _atom_sites.fract_transf_matrix[1][1] 0.016729 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014928 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014758 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HEM A 1 201 139 HEM HEM . D 3 9IR A 1 202 140 9IR RL1 . E 4 GOL A 1 203 141 GOL GOL . F 4 GOL A 1 204 142 GOL GOL . G 5 SO4 A 1 205 1 SO4 SO4 . H 5 SO4 A 1 206 2 SO4 SO4 . I 2 HEM B 1 201 139 HEM HEM . J 3 9IR B 1 202 140 9IR RL1 . K 4 GOL B 1 203 141 GOL GOL . L 6 HOH A 1 301 83 HOH HOH . L 6 HOH A 2 302 84 HOH HOH . L 6 HOH A 3 303 36 HOH HOH . L 6 HOH A 4 304 82 HOH HOH . L 6 HOH A 5 305 85 HOH HOH . L 6 HOH A 6 306 29 HOH HOH . L 6 HOH A 7 307 76 HOH HOH . L 6 HOH A 8 308 52 HOH HOH . L 6 HOH A 9 309 28 HOH HOH . L 6 HOH A 10 310 62 HOH HOH . L 6 HOH A 11 311 24 HOH HOH . L 6 HOH A 12 312 15 HOH HOH . L 6 HOH A 13 313 11 HOH HOH . L 6 HOH A 14 314 12 HOH HOH . L 6 HOH A 15 315 43 HOH HOH . L 6 HOH A 16 316 8 HOH HOH . L 6 HOH A 17 317 30 HOH HOH . L 6 HOH A 18 318 88 HOH HOH . L 6 HOH A 19 319 64 HOH HOH . L 6 HOH A 20 320 1 HOH HOH . L 6 HOH A 21 321 16 HOH HOH . L 6 HOH A 22 322 5 HOH HOH . L 6 HOH A 23 323 7 HOH HOH . L 6 HOH A 24 324 56 HOH HOH . L 6 HOH A 25 325 58 HOH HOH . L 6 HOH A 26 326 4 HOH HOH . L 6 HOH A 27 327 14 HOH HOH . L 6 HOH A 28 328 38 HOH HOH . L 6 HOH A 29 329 19 HOH HOH . L 6 HOH A 30 330 13 HOH HOH . L 6 HOH A 31 331 89 HOH HOH . L 6 HOH A 32 332 18 HOH HOH . L 6 HOH A 33 333 34 HOH HOH . L 6 HOH A 34 334 73 HOH HOH . L 6 HOH A 35 335 87 HOH HOH . L 6 HOH A 36 336 90 HOH HOH . L 6 HOH A 37 337 22 HOH HOH . L 6 HOH A 38 338 17 HOH HOH . L 6 HOH A 39 339 33 HOH HOH . L 6 HOH A 40 340 45 HOH HOH . M 6 HOH B 1 301 63 HOH HOH . M 6 HOH B 2 302 91 HOH HOH . M 6 HOH B 3 303 78 HOH HOH . M 6 HOH B 4 304 103 HOH HOH . M 6 HOH B 5 305 102 HOH HOH . M 6 HOH B 6 306 10 HOH HOH . M 6 HOH B 7 307 96 HOH HOH . M 6 HOH B 8 308 44 HOH HOH . M 6 HOH B 9 309 68 HOH HOH . M 6 HOH B 10 310 31 HOH HOH . M 6 HOH B 11 311 69 HOH HOH . M 6 HOH B 12 312 9 HOH HOH . M 6 HOH B 13 313 92 HOH HOH . M 6 HOH B 14 314 65 HOH HOH . M 6 HOH B 15 315 39 HOH HOH . M 6 HOH B 16 316 60 HOH HOH . M 6 HOH B 17 317 35 HOH HOH . M 6 HOH B 18 318 75 HOH HOH . M 6 HOH B 19 319 98 HOH HOH . M 6 HOH B 20 320 61 HOH HOH . M 6 HOH B 21 321 55 HOH HOH . M 6 HOH B 22 322 26 HOH HOH . M 6 HOH B 23 323 49 HOH HOH . M 6 HOH B 24 324 42 HOH HOH . M 6 HOH B 25 325 54 HOH HOH . M 6 HOH B 26 326 53 HOH HOH . M 6 HOH B 27 327 21 HOH HOH . M 6 HOH B 28 328 37 HOH HOH . M 6 HOH B 29 329 46 HOH HOH . M 6 HOH B 30 330 2 HOH HOH . M 6 HOH B 31 331 41 HOH HOH . M 6 HOH B 32 332 6 HOH HOH . M 6 HOH B 33 333 3 HOH HOH . M 6 HOH B 34 334 23 HOH HOH . M 6 HOH B 35 335 57 HOH HOH . M 6 HOH B 36 336 66 HOH HOH . M 6 HOH B 37 337 40 HOH HOH . M 6 HOH B 38 338 81 HOH HOH . M 6 HOH B 39 339 93 HOH HOH . M 6 HOH B 40 340 50 HOH HOH . M 6 HOH B 41 341 97 HOH HOH . M 6 HOH B 42 342 70 HOH HOH . M 6 HOH B 43 343 95 HOH HOH . M 6 HOH B 44 344 51 HOH HOH . M 6 HOH B 45 345 104 HOH HOH . M 6 HOH B 46 346 27 HOH HOH . M 6 HOH B 47 347 101 HOH HOH . M 6 HOH B 48 348 59 HOH HOH . M 6 HOH B 49 349 25 HOH HOH . M 6 HOH B 50 350 74 HOH HOH . M 6 HOH B 51 351 99 HOH HOH . M 6 HOH B 52 352 48 HOH HOH . M 6 HOH B 53 353 100 HOH HOH . M 6 HOH B 54 354 79 HOH HOH . M 6 HOH B 55 355 32 HOH HOH . M 6 HOH B 56 356 94 HOH HOH . M 6 HOH B 57 357 20 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . E 4 -2.982 -4.332 -34.404 1 50.09 0 C1 GOL 203 A 1 HETATM 2 O O1 GOL . . . E 4 -3.486 -5.45 -35.124 1 50.79 0 O1 GOL 203 A 1 HETATM 3 C C2 GOL . . . E 4 -4.095 -3.349 -34.167 1 49.86 0 C2 GOL 203 A 1 HETATM 4 O O2 GOL . . . E 4 -3.546 -2.082 -33.826 1 31.4 0 O2 GOL 203 A 1 HETATM 5 C C3 GOL . . . E 4 -4.998 -3.219 -35.374 1 43.82 0 C3 GOL 203 A 1 HETATM 6 O O3 GOL . . . E 4 -4.2 -3.151 -36.548 1 44.05 0 O3 GOL 203 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 26 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 259 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 6 #