data_7SK3 # _model_server_result.job_id ZyNBmF5MrY97VaOAb1h_EQ _model_server_result.datetime_utc '2024-11-21 13:58:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sk3 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":604}' # _entry.id 7SK3 # _exptl.entry_id 7SK3 _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 386.654 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description CHOLESTEROL _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SK3 _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SK3 _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 7 G N N ? 7 H N N ? 7 I N N ? 7 J N N ? 7 K N N ? 7 L N N ? 7 M N N ? 7 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 119 A CYS 117 1_555 A SG CYS 198 A CYS 196 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf2 B SG CYS 9 B CYS 9 1_555 B SG CYS 34 B CYS 34 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.031 ? disulf ? disulf3 B SG CYS 11 B CYS 11 1_555 B SG CYS 50 B CYS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 C SG CYS 24 C CYS 24 1_555 C SG CYS 89 C CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf5 D SG CYS 25 D CYS 25 1_555 D SG CYS 99 D CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.035 ? disulf ? disulf6 E SG CYS 24 E CYS 24 1_555 E SG CYS 89 E CYS 89 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? disulf ? disulf7 F SG CYS 25 F CYS 25 1_555 F SG CYS 99 F CYS 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.033 ? # _chem_comp.formula 'C27 H46 O' _chem_comp.formula_weight 386.654 _chem_comp.id CLR _chem_comp.mon_nstd_flag . _chem_comp.name CHOLESTEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 CLR sing 70 n n C1 C10 CLR sing 71 n n C1 H11 CLR sing 72 n n C1 H12 CLR sing 73 n n C2 C3 CLR sing 74 n n C2 H21 CLR sing 75 n n C2 H22 CLR sing 76 n n C3 C4 CLR sing 77 n n C3 O1 CLR sing 78 n n C3 H3 CLR sing 79 n n C4 C5 CLR sing 80 n n C4 H41 CLR sing 81 n n C4 H42 CLR sing 82 n n C5 C6 CLR doub 83 n n C5 C10 CLR sing 84 n n C6 C7 CLR sing 85 n n C6 H6 CLR sing 86 n n C7 C8 CLR sing 87 n n C7 H71 CLR sing 88 n n C7 H72 CLR sing 89 n n C8 C9 CLR sing 90 n n C8 C14 CLR sing 91 n n C8 H8 CLR sing 92 n n C9 C10 CLR sing 93 n n C9 C11 CLR sing 94 n n C9 H9 CLR sing 95 n n C10 C19 CLR sing 96 n n C11 C12 CLR sing 97 n n C11 H111 CLR sing 98 n n C11 H112 CLR sing 99 n n C12 C13 CLR sing 100 n n C12 H121 CLR sing 101 n n C12 H122 CLR sing 102 n n C13 C14 CLR sing 103 n n C13 C17 CLR sing 104 n n C13 C18 CLR sing 105 n n C14 C15 CLR sing 106 n n C14 H14 CLR sing 107 n n C15 C16 CLR sing 108 n n C15 H151 CLR sing 109 n n C15 H152 CLR sing 110 n n C16 C17 CLR sing 111 n n C16 H161 CLR sing 112 n n C16 H162 CLR sing 113 n n C17 C20 CLR sing 114 n n C17 H17 CLR sing 115 n n C18 H181 CLR sing 116 n n C18 H182 CLR sing 117 n n C18 H183 CLR sing 118 n n C19 H191 CLR sing 119 n n C19 H192 CLR sing 120 n n C19 H193 CLR sing 121 n n C20 C21 CLR sing 122 n n C20 C22 CLR sing 123 n n C20 H20 CLR sing 124 n n C21 H211 CLR sing 125 n n C21 H212 CLR sing 126 n n C21 H213 CLR sing 127 n n C22 C23 CLR sing 128 n n C22 H221 CLR sing 129 n n C22 H222 CLR sing 130 n n C23 C24 CLR sing 131 n n C23 H231 CLR sing 132 n n C23 H232 CLR sing 133 n n C24 C25 CLR sing 134 n n C24 H241 CLR sing 135 n n C24 H242 CLR sing 136 n n C25 C26 CLR sing 137 n n C25 C27 CLR sing 138 n n C25 H25 CLR sing 139 n n C26 H261 CLR sing 140 n n C26 H262 CLR sing 141 n n C26 H263 CLR sing 142 n n C27 H271 CLR sing 143 n n C27 H272 CLR sing 144 n n C27 H273 CLR sing 145 n n O1 H1 CLR sing 146 n n # _atom_sites.entry_id 7SK3 _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 7 CLR A 1 601 601 CLR CLR . H 7 CLR A 1 602 1001 CLR CLR . I 7 CLR A 1 603 701 CLR CLR . J 7 CLR A 1 604 501 CLR CLR . K 7 CLR A 1 605 801 CLR CLR . L 7 CLR A 1 606 1101 CLR CLR . M 7 CLR A 1 607 1201 CLR CLR . N 7 CLR A 1 608 401 CLR CLR . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CLR . . . J 7 175.659 168.467 138.5 1 33.16 ? C1 CLR 604 A 1 HETATM 2 C C2 CLR . . . J 7 176.044 167.896 137.156 1 33.16 ? C2 CLR 604 A 1 HETATM 3 C C3 CLR . . . J 7 177.134 166.866 137.263 1 33.16 ? C3 CLR 604 A 1 HETATM 4 C C4 CLR . . . J 7 176.696 165.763 138.245 1 33.16 ? C4 CLR 604 A 1 HETATM 5 C C5 CLR . . . J 7 176.223 166.286 139.583 1 33.16 ? C5 CLR 604 A 1 HETATM 6 C C6 CLR . . . J 7 176.71 165.727 140.676 1 33.16 ? C6 CLR 604 A 1 HETATM 7 C C7 CLR . . . J 7 176.312 166.164 142.096 1 33.16 ? C7 CLR 604 A 1 HETATM 8 C C8 CLR . . . J 7 175.031 167.005 142.07 1 33.16 ? C8 CLR 604 A 1 HETATM 9 C C9 CLR . . . J 7 175.139 168.073 140.942 1 33.16 ? C9 CLR 604 A 1 HETATM 10 C C10 CLR . . . J 7 175.204 167.437 139.533 1 33.16 ? C10 CLR 604 A 1 HETATM 11 C C11 CLR . . . J 7 174.078 169.176 141.064 1 33.16 ? C11 CLR 604 A 1 HETATM 12 C C12 CLR . . . J 7 173.968 169.769 142.478 1 33.16 ? C12 CLR 604 A 1 HETATM 13 C C13 CLR . . . J 7 173.652 168.647 143.477 1 33.16 ? C13 CLR 604 A 1 HETATM 14 C C14 CLR . . . J 7 174.906 167.695 143.391 1 33.16 ? C14 CLR 604 A 1 HETATM 15 C C15 CLR . . . J 7 174.797 166.789 144.661 1 33.16 ? C15 CLR 604 A 1 HETATM 16 C C16 CLR . . . J 7 174.03 167.696 145.701 1 33.16 ? C16 CLR 604 A 1 HETATM 17 C C17 CLR . . . J 7 173.777 169.078 144.985 1 33.16 ? C17 CLR 604 A 1 HETATM 18 C C18 CLR . . . J 7 172.355 167.934 143.211 1 33.16 ? C18 CLR 604 A 1 HETATM 19 C C19 CLR . . . J 7 173.827 166.865 139.148 1 33.16 ? C19 CLR 604 A 1 HETATM 20 C C20 CLR . . . J 7 172.544 169.752 145.579 1 33.16 ? C20 CLR 604 A 1 HETATM 21 C C21 CLR . . . J 7 172.166 171.08 144.914 1 33.16 ? C21 CLR 604 A 1 HETATM 22 C C22 CLR . . . J 7 172.957 170.084 147.061 1 33.16 ? C22 CLR 604 A 1 HETATM 23 C C23 CLR . . . J 7 172.031 169.412 148.084 1 33.16 ? C23 CLR 604 A 1 HETATM 24 C C24 CLR . . . J 7 171.724 170.548 149.112 1 33.16 ? C24 CLR 604 A 1 HETATM 25 C C25 CLR . . . J 7 170.782 169.996 150.196 1 33.16 ? C25 CLR 604 A 1 HETATM 26 C C26 CLR . . . J 7 169.369 169.994 149.599 1 33.16 ? C26 CLR 604 A 1 HETATM 27 C C27 CLR . . . J 7 170.893 170.736 151.529 1 33.16 ? C27 CLR 604 A 1 HETATM 28 O O1 CLR . . . J 7 177.511 166.295 136.027 1 33.16 ? O1 CLR 604 A 1 HETATM 29 H H11 CLR . . . J 7 176.37 169.008 138.878 1 33.16 ? H11 CLR 604 A 1 HETATM 30 H H12 CLR . . . J 7 174.972 169.142 138.389 1 33.16 ? H12 CLR 604 A 1 HETATM 31 H H21 CLR . . . J 7 175.267 167.555 136.688 1 33.16 ? H21 CLR 604 A 1 HETATM 32 H H22 CLR . . . J 7 176.287 168.606 136.542 1 33.16 ? H22 CLR 604 A 1 HETATM 33 H H3 CLR . . . J 7 177.946 167.283 137.591 1 33.16 ? H3 CLR 604 A 1 HETATM 34 H H41 CLR . . . J 7 177.401 165.107 138.36 1 33.16 ? H41 CLR 604 A 1 HETATM 35 H H42 CLR . . . J 7 175.994 165.229 137.842 1 33.16 ? H42 CLR 604 A 1 HETATM 36 H H6 CLR . . . J 7 177.325 165.033 140.607 1 33.16 ? H6 CLR 604 A 1 HETATM 37 H H71 CLR . . . J 7 177.047 166.628 142.528 1 33.16 ? H71 CLR 604 A 1 HETATM 38 H H72 CLR . . . J 7 176.222 165.403 142.692 1 33.16 ? H72 CLR 604 A 1 HETATM 39 H H8 CLR . . . J 7 174.265 166.439 141.885 1 33.16 ? H8 CLR 604 A 1 HETATM 40 H H9 CLR . . . J 7 175.986 168.528 141.065 1 33.16 ? H9 CLR 604 A 1 HETATM 41 H H111 CLR . . . J 7 173.211 168.875 140.754 1 33.16 ? H111 CLR 604 A 1 HETATM 42 H H112 CLR . . . J 7 174.248 169.883 140.422 1 33.16 ? H112 CLR 604 A 1 HETATM 43 H H121 CLR . . . J 7 173.301 170.472 142.499 1 33.16 ? H121 CLR 604 A 1 HETATM 44 H H122 CLR . . . J 7 174.761 170.278 142.706 1 33.16 ? H122 CLR 604 A 1 HETATM 45 H H14 CLR . . . J 7 175.715 168.224 143.476 1 33.16 ? H14 CLR 604 A 1 HETATM 46 H H151 CLR . . . J 7 175.663 166.484 144.973 1 33.16 ? H151 CLR 604 A 1 HETATM 47 H H152 CLR . . . J 7 174.356 165.94 144.497 1 33.16 ? H152 CLR 604 A 1 HETATM 48 H H161 CLR . . . J 7 174.535 167.787 146.525 1 33.16 ? H161 CLR 604 A 1 HETATM 49 H H162 CLR . . . J 7 173.228 167.265 146.034 1 33.16 ? H162 CLR 604 A 1 HETATM 50 H H17 CLR . . . J 7 174.506 169.713 145.065 1 33.16 ? H17 CLR 604 A 1 HETATM 51 H H181 CLR . . . J 7 171.599 168.535 143.125 1 33.16 ? H181 CLR 604 A 1 HETATM 52 H H182 CLR . . . J 7 172.095 167.259 143.858 1 33.16 ? H182 CLR 604 A 1 HETATM 53 H H183 CLR . . . J 7 172.329 167.5 142.344 1 33.16 ? H183 CLR 604 A 1 HETATM 54 H H191 CLR . . . J 7 173.866 166.216 138.429 1 33.16 ? H191 CLR 604 A 1 HETATM 55 H H192 CLR . . . J 7 173.177 167.544 138.909 1 33.16 ? H192 CLR 604 A 1 HETATM 56 H H193 CLR . . . J 7 173.45 166.327 139.862 1 33.16 ? H193 CLR 604 A 1 HETATM 57 H H20 CLR . . . J 7 171.769 169.174 145.509 1 33.16 ? H20 CLR 604 A 1 HETATM 58 H H211 CLR . . . J 7 172.96 171.567 144.643 1 33.16 ? H211 CLR 604 A 1 HETATM 59 H H212 CLR . . . J 7 171.634 171.676 145.464 1 33.16 ? H212 CLR 604 A 1 HETATM 60 H H213 CLR . . . J 7 171.699 170.956 144.074 1 33.16 ? H213 CLR 604 A 1 HETATM 61 H H221 CLR . . . J 7 172.986 171.044 147.197 1 33.16 ? H221 CLR 604 A 1 HETATM 62 H H222 CLR . . . J 7 173.879 169.831 147.217 1 33.16 ? H222 CLR 604 A 1 HETATM 63 H H231 CLR . . . J 7 172.422 168.619 148.485 1 33.16 ? H231 CLR 604 A 1 HETATM 64 H H232 CLR . . . J 7 171.235 169.039 147.677 1 33.16 ? H232 CLR 604 A 1 HETATM 65 H H241 CLR . . . J 7 171.35 171.331 148.678 1 33.16 ? H241 CLR 604 A 1 HETATM 66 H H242 CLR . . . J 7 172.535 170.909 149.502 1 33.16 ? H242 CLR 604 A 1 HETATM 67 H H25 CLR . . . J 7 171.037 169.087 150.42 1 33.16 ? H25 CLR 604 A 1 HETATM 68 H H261 CLR . . . J 7 168.689 169.731 150.238 1 33.16 ? H261 CLR 604 A 1 HETATM 69 H H262 CLR . . . J 7 169.326 169.395 148.837 1 33.16 ? H262 CLR 604 A 1 HETATM 70 H H263 CLR . . . J 7 169.053 170.872 149.334 1 33.16 ? H263 CLR 604 A 1 HETATM 71 H H271 CLR . . . J 7 170.245 170.442 152.187 1 33.16 ? H271 CLR 604 A 1 HETATM 72 H H272 CLR . . . J 7 170.817 171.701 151.467 1 33.16 ? H272 CLR 604 A 1 HETATM 73 H H273 CLR . . . J 7 171.733 170.552 151.979 1 33.16 ? H273 CLR 604 A 1 HETATM 74 H H1 CLR . . . J 7 178.095 165.681 136.101 1 33.16 ? H1 CLR 604 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 20 _model_server_stats.create_model_time_ms 23 _model_server_stats.query_time_ms 675 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 74 #