data_7SNH
#
_model_server_result.job_id            4xpSaWCWYVWF8vsx69ARVQ 
_model_server_result.datetime_utc      '2024-12-23 03:00:44' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7snh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"F","auth_seq_id":602}' 
#
_entry.id    7SNH 
#
_exptl.entry_id    7SNH 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              743.405 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_entity.pdbx_number_of_molecules    8 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 F N N 
? 2 G N N 
? 2 H N N 
? 2 I N N 
? 2 J N N 
? 2 K N N 
? 2 L N N 
#
_chem_comp.formula           'C21 H28 N7 O17 P3' 
_chem_comp.formula_weight    743.405 
_chem_comp.id                NAP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PA O1A NAP doub 235 n n 
PA O2A NAP sing 236 n n 
PA O5B NAP sing 237 n n 
PA O3 NAP sing 238 n n 
O2A HOA2 NAP sing 239 n n 
O5B C5B NAP sing 240 n n 
C5B C4B NAP sing 241 n n 
C5B H51A NAP sing 242 n n 
C5B H52A NAP sing 243 n n 
C4B O4B NAP sing 244 n n 
C4B C3B NAP sing 245 n n 
C4B H4B NAP sing 246 n n 
O4B C1B NAP sing 247 n n 
C3B O3B NAP sing 248 n n 
C3B C2B NAP sing 249 n n 
C3B H3B NAP sing 250 n n 
O3B HO3A NAP sing 251 n n 
C2B O2B NAP sing 252 n n 
C2B C1B NAP sing 253 n n 
C2B H2B NAP sing 254 n n 
O2B P2B NAP sing 255 n n 
C1B N9A NAP sing 256 n n 
C1B H1B NAP sing 257 n n 
N9A C8A NAP sing 258 n y 
N9A C4A NAP sing 259 n y 
C8A N7A NAP doub 260 n y 
C8A H8A NAP sing 261 n n 
N7A C5A NAP sing 262 n y 
C5A C6A NAP sing 263 n y 
C5A C4A NAP doub 264 n y 
C6A N6A NAP sing 265 n n 
C6A N1A NAP doub 266 n y 
N6A H61A NAP sing 267 n n 
N6A H62A NAP sing 268 n n 
N1A C2A NAP sing 269 n y 
C2A N3A NAP doub 270 n y 
C2A H2A NAP sing 271 n n 
N3A C4A NAP sing 272 n y 
O3 PN NAP sing 273 n n 
PN O1N NAP doub 274 n n 
PN O2N NAP sing 275 n n 
PN O5D NAP sing 276 n n 
O5D C5D NAP sing 277 n n 
C5D C4D NAP sing 278 n n 
C5D H51N NAP sing 279 n n 
C5D H52N NAP sing 280 n n 
C4D O4D NAP sing 281 n n 
C4D C3D NAP sing 282 n n 
C4D H4D NAP sing 283 n n 
O4D C1D NAP sing 284 n n 
C3D O3D NAP sing 285 n n 
C3D C2D NAP sing 286 n n 
C3D H3D NAP sing 287 n n 
O3D HO3N NAP sing 288 n n 
C2D O2D NAP sing 289 n n 
C2D C1D NAP sing 290 n n 
C2D H2D NAP sing 291 n n 
O2D HO2N NAP sing 292 n n 
C1D N1N NAP sing 293 n n 
C1D H1D NAP sing 294 n n 
N1N C2N NAP sing 295 n y 
N1N C6N NAP doub 296 n y 
C2N C3N NAP doub 297 n y 
C2N H2N NAP sing 298 n n 
C3N C7N NAP sing 299 n n 
C3N C4N NAP sing 300 n y 
C7N O7N NAP doub 301 n n 
C7N N7N NAP sing 302 n n 
N7N H71N NAP sing 303 n n 
N7N H72N NAP sing 304 n n 
C4N C5N NAP doub 305 n y 
C4N H4N NAP sing 306 n n 
C5N C6N NAP sing 307 n y 
C5N H5N NAP sing 308 n n 
C6N H6N NAP sing 309 n n 
P2B O1X NAP doub 310 n n 
P2B O2X NAP sing 311 n n 
P2B O3X NAP sing 312 n n 
O2X HOP2 NAP sing 313 n n 
O3X HOP3 NAP sing 314 n n 
#
_atom_sites.entry_id                     7SNH 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 NAP A 1 601 799 NAP NAP . 
F 2 NAP A 1 602 811 NAP NAP . 
G 2 NAP B 1 601 799 NAP NAP . 
H 2 NAP B 1 602 811 NAP NAP . 
I 2 NAP C 1 601 799 NAP NAP . 
J 2 NAP C 1 602 811 NAP NAP . 
K 2 NAP D 1 601 799 NAP NAP . 
L 2 NAP D 1 602 811 NAP NAP . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PA NAP . . . F 2 58.151 98.57 71.144 1 16.39 ? PA NAP 602 A 1 
HETATM 2 O O1A NAP . . . F 2 57.554 97.73 72.234 1 16.39 ? O1A NAP 602 A 1 
HETATM 3 O O2A NAP . . . F 2 57.587 99.921 70.803 1 16.39 ? O2A NAP 602 A 1 
HETATM 4 O O5B NAP . . . F 2 58.192 97.697 69.802 1 16.39 ? O5B NAP 602 A 1 
HETATM 5 C C5B NAP . . . F 2 57.957 96.299 69.835 1 16.39 ? C5B NAP 602 A 1 
HETATM 6 C C4B NAP . . . F 2 57.085 95.904 68.658 1 16.39 ? C4B NAP 602 A 1 
HETATM 7 O O4B NAP . . . F 2 55.736 95.725 69.086 1 16.39 ? O4B NAP 602 A 1 
HETATM 8 C C3B NAP . . . F 2 57.054 96.963 67.574 1 16.39 ? C3B NAP 602 A 1 
HETATM 9 O O3B NAP . . . F 2 57.442 96.363 66.346 1 16.39 ? O3B NAP 602 A 1 
HETATM 10 C C2B NAP . . . F 2 55.627 97.439 67.507 1 16.39 ? C2B NAP 602 A 1 
HETATM 11 O O2B NAP . . . F 2 55.163 97.6 66.186 1 16.39 ? O2B NAP 602 A 1 
HETATM 12 C C1B NAP . . . F 2 54.853 96.308 68.131 1 16.39 ? C1B NAP 602 A 1 
HETATM 13 N N9A NAP . . . F 2 53.625 96.798 68.787 1 16.39 ? N9A NAP 602 A 1 
HETATM 14 C C8A NAP . . . F 2 53.321 98.066 69.087 1 16.39 ? C8A NAP 602 A 1 
HETATM 15 N N7A NAP . . . F 2 52.113 98.127 69.683 1 16.39 ? N7A NAP 602 A 1 
HETATM 16 C C5A NAP . . . F 2 51.633 96.879 69.755 1 16.39 ? C5A NAP 602 A 1 
HETATM 17 C C6A NAP . . . F 2 50.414 96.233 70.267 1 16.39 ? C6A NAP 602 A 1 
HETATM 18 N N6A NAP . . . F 2 49.434 96.967 70.829 1 16.39 ? N6A NAP 602 A 1 
HETATM 19 N N1A NAP . . . F 2 50.31 94.898 70.146 1 16.39 ? N1A NAP 602 A 1 
HETATM 20 C C2A NAP . . . F 2 51.277 94.161 69.583 1 16.39 ? C2A NAP 602 A 1 
HETATM 21 N N3A NAP . . . F 2 52.41 94.68 69.1 1 16.39 ? N3A NAP 602 A 1 
HETATM 22 C C4A NAP . . . F 2 52.633 96.008 69.159 1 16.39 ? C4A NAP 602 A 1 
HETATM 23 O O3 NAP . . . F 2 59.688 98.73 71.59 1 16.39 ? O3 NAP 602 A 1 
HETATM 24 P PN NAP . . . F 2 60.75 99.592 70.771 1 16.39 ? PN NAP 602 A 1 
HETATM 25 O O1N NAP . . . F 2 60.161 99.973 69.444 1 16.39 ? O1N NAP 602 A 1 
HETATM 26 O O2N NAP . . . F 2 62.028 98.828 70.809 1 16.39 ? O2N NAP 602 A 1 
HETATM 27 O O5D NAP . . . F 2 60.882 100.913 71.659 1 16.39 ? O5D NAP 602 A 1 
HETATM 28 C C5D NAP . . . F 2 59.973 102.001 71.526 1 16.39 ? C5D NAP 602 A 1 
HETATM 29 C C4D NAP . . . F 2 60.677 103.234 70.973 1 16.39 ? C4D NAP 602 A 1 
HETATM 30 O O4D NAP . . . F 2 61.976 103.421 71.549 1 16.39 ? O4D NAP 602 A 1 
HETATM 31 C C3D NAP . . . F 2 60.87 103.114 69.473 1 16.39 ? C3D NAP 602 A 1 
HETATM 32 O O3D NAP . . . F 2 60.299 104.243 68.819 1 16.39 ? O3D NAP 602 A 1 
HETATM 33 C C2D NAP . . . F 2 62.363 103.074 69.264 1 16.39 ? C2D NAP 602 A 1 
HETATM 34 O O2D NAP . . . F 2 62.757 103.792 68.098 1 16.39 ? O2D NAP 602 A 1 
HETATM 35 C C1D NAP . . . F 2 62.912 103.727 70.516 1 16.39 ? C1D NAP 602 A 1 
HETATM 36 N N1N NAP . . . F 2 64.255 103.228 70.809 1 16.39 ? N1N NAP 602 A 1 
HETATM 37 C C2N NAP . . . F 2 65.247 103.669 70.045 1 16.39 ? C2N NAP 602 A 1 
HETATM 38 C C3N NAP . . . F 2 66.545 103.248 70.258 1 16.39 ? C3N NAP 602 A 1 
HETATM 39 C C7N NAP . . . F 2 67.615 103.784 69.365 1 16.39 ? C7N NAP 602 A 1 
HETATM 40 O O7N NAP . . . F 2 67.301 104.538 68.464 1 16.39 ? O7N NAP 602 A 1 
HETATM 41 N N7N NAP . . . F 2 68.876 103.438 69.573 1 16.39 ? N7N NAP 602 A 1 
HETATM 42 C C4N NAP . . . F 2 66.821 102.356 71.282 1 16.39 ? C4N NAP 602 A 1 
HETATM 43 C C5N NAP . . . F 2 65.765 101.914 72.062 1 16.39 ? C5N NAP 602 A 1 
HETATM 44 C C6N NAP . . . F 2 64.481 102.362 71.803 1 16.39 ? C6N NAP 602 A 1 
HETATM 45 P P2B NAP . . . F 2 55.378 98.927 65.323 1 16.39 ? P2B NAP 602 A 1 
HETATM 46 O O1X NAP . . . F 2 56.565 98.606 64.473 1 16.39 ? O1X NAP 602 A 1 
HETATM 47 O O2X NAP . . . F 2 55.616 100.018 66.323 1 16.39 ? O2X NAP 602 A 1 
HETATM 48 O O3X NAP . . . F 2 54.092 99.019 64.567 1 16.39 ? O3X NAP 602 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    84 
_model_server_stats.query_time_ms           299 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           48 
#