data_7SOR # _model_server_result.job_id iaKSmU5D1nhyk_5aWRi4iA _model_server_result.datetime_utc '2024-11-24 10:40:01' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sor # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":501}' # _entry.id 7SOR # _exptl.entry_id 7SOR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SOR _cell.length_a 48.562 _cell.length_b 55.89 _cell.length_c 70.172 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SOR _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA dimeric 2 author_and_software_defined_assembly 1 PISA dimeric 2 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,E,F,H,I 1 1 C,D,G,J,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 G N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 109 n n C1 C2 EDO sing 110 n n C1 H11 EDO sing 111 n n C1 H12 EDO sing 112 n n O1 HO1 EDO sing 113 n n C2 O2 EDO sing 114 n n C2 H21 EDO sing 115 n n C2 H22 EDO sing 116 n n O2 HO2 EDO sing 117 n n # _atom_sites.entry_id 7SOR _atom_sites.fract_transf_matrix[1][1] 0.020592 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017892 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014251 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 EDO A 1 501 1 EDO EDO . F 4 CL A 1 502 1 CL CL . G 3 EDO C 1 501 2 EDO EDO . H 5 HOH A 1 601 96 HOH HOH . H 5 HOH A 2 602 137 HOH HOH . H 5 HOH A 3 603 108 HOH HOH . H 5 HOH A 4 604 48 HOH HOH . H 5 HOH A 5 605 98 HOH HOH . H 5 HOH A 6 606 116 HOH HOH . H 5 HOH A 7 607 83 HOH HOH . H 5 HOH A 8 608 144 HOH HOH . H 5 HOH A 9 609 102 HOH HOH . H 5 HOH A 10 610 58 HOH HOH . H 5 HOH A 11 611 131 HOH HOH . H 5 HOH A 12 612 154 HOH HOH . H 5 HOH A 13 613 89 HOH HOH . H 5 HOH A 14 614 65 HOH HOH . H 5 HOH A 15 615 140 HOH HOH . H 5 HOH A 16 616 39 HOH HOH . H 5 HOH A 17 617 10 HOH HOH . H 5 HOH A 18 618 15 HOH HOH . H 5 HOH A 19 619 50 HOH HOH . H 5 HOH A 20 620 105 HOH HOH . H 5 HOH A 21 621 150 HOH HOH . H 5 HOH A 22 622 38 HOH HOH . H 5 HOH A 23 623 78 HOH HOH . H 5 HOH A 24 624 12 HOH HOH . H 5 HOH A 25 625 81 HOH HOH . H 5 HOH A 26 626 32 HOH HOH . H 5 HOH A 27 627 9 HOH HOH . H 5 HOH A 28 628 44 HOH HOH . H 5 HOH A 29 629 33 HOH HOH . H 5 HOH A 30 630 97 HOH HOH . H 5 HOH A 31 631 17 HOH HOH . H 5 HOH A 32 632 14 HOH HOH . H 5 HOH A 33 633 82 HOH HOH . H 5 HOH A 34 634 113 HOH HOH . H 5 HOH A 35 635 45 HOH HOH . H 5 HOH A 36 636 152 HOH HOH . H 5 HOH A 37 637 138 HOH HOH . H 5 HOH A 38 638 13 HOH HOH . H 5 HOH A 39 639 64 HOH HOH . H 5 HOH A 40 640 20 HOH HOH . H 5 HOH A 41 641 30 HOH HOH . H 5 HOH A 42 642 46 HOH HOH . H 5 HOH A 43 643 91 HOH HOH . H 5 HOH A 44 644 42 HOH HOH . H 5 HOH A 45 645 142 HOH HOH . H 5 HOH A 46 646 73 HOH HOH . H 5 HOH A 47 647 86 HOH HOH . H 5 HOH A 48 648 52 HOH HOH . H 5 HOH A 49 649 66 HOH HOH . H 5 HOH A 50 650 29 HOH HOH . H 5 HOH A 51 651 84 HOH HOH . H 5 HOH A 52 652 123 HOH HOH . H 5 HOH A 53 653 104 HOH HOH . H 5 HOH A 54 654 136 HOH HOH . H 5 HOH A 55 655 112 HOH HOH . H 5 HOH A 56 656 124 HOH HOH . H 5 HOH A 57 657 111 HOH HOH . H 5 HOH A 58 658 141 HOH HOH . H 5 HOH A 59 659 5 HOH HOH . H 5 HOH A 60 660 114 HOH HOH . H 5 HOH A 61 661 139 HOH HOH . H 5 HOH A 62 662 72 HOH HOH . H 5 HOH A 63 663 74 HOH HOH . H 5 HOH A 64 664 71 HOH HOH . H 5 HOH A 65 665 151 HOH HOH . H 5 HOH A 66 666 24 HOH HOH . H 5 HOH A 67 667 149 HOH HOH . H 5 HOH A 68 668 133 HOH HOH . H 5 HOH A 69 669 110 HOH HOH . H 5 HOH A 70 670 101 HOH HOH . H 5 HOH A 71 671 119 HOH HOH . H 5 HOH A 72 672 106 HOH HOH . H 5 HOH A 73 673 129 HOH HOH . H 5 HOH A 74 674 132 HOH HOH . H 5 HOH A 75 675 8 HOH HOH . H 5 HOH A 76 676 22 HOH HOH . H 5 HOH A 77 677 134 HOH HOH . I 5 HOH B 1 101 135 HOH HOH . I 5 HOH B 2 102 57 HOH HOH . I 5 HOH B 3 103 26 HOH HOH . I 5 HOH B 4 104 63 HOH HOH . J 5 HOH C 1 601 120 HOH HOH . J 5 HOH C 2 602 118 HOH HOH . J 5 HOH C 3 603 156 HOH HOH . J 5 HOH C 4 604 145 HOH HOH . J 5 HOH C 5 605 25 HOH HOH . J 5 HOH C 6 606 90 HOH HOH . J 5 HOH C 7 607 161 HOH HOH . J 5 HOH C 8 608 49 HOH HOH . J 5 HOH C 9 609 128 HOH HOH . J 5 HOH C 10 610 107 HOH HOH . J 5 HOH C 11 611 146 HOH HOH . J 5 HOH C 12 612 153 HOH HOH . J 5 HOH C 13 613 59 HOH HOH . J 5 HOH C 14 614 68 HOH HOH . J 5 HOH C 15 615 41 HOH HOH . J 5 HOH C 16 616 40 HOH HOH . J 5 HOH C 17 617 94 HOH HOH . J 5 HOH C 18 618 130 HOH HOH . J 5 HOH C 19 619 122 HOH HOH . J 5 HOH C 20 620 61 HOH HOH . J 5 HOH C 21 621 69 HOH HOH . J 5 HOH C 22 622 127 HOH HOH . J 5 HOH C 23 623 18 HOH HOH . J 5 HOH C 24 624 54 HOH HOH . J 5 HOH C 25 625 55 HOH HOH . J 5 HOH C 26 626 70 HOH HOH . J 5 HOH C 27 627 75 HOH HOH . J 5 HOH C 28 628 6 HOH HOH . J 5 HOH C 29 629 27 HOH HOH . J 5 HOH C 30 630 11 HOH HOH . J 5 HOH C 31 631 7 HOH HOH . J 5 HOH C 32 632 47 HOH HOH . J 5 HOH C 33 633 85 HOH HOH . J 5 HOH C 34 634 80 HOH HOH . J 5 HOH C 35 635 4 HOH HOH . J 5 HOH C 36 636 103 HOH HOH . J 5 HOH C 37 637 28 HOH HOH . J 5 HOH C 38 638 67 HOH HOH . J 5 HOH C 39 639 51 HOH HOH . J 5 HOH C 40 640 100 HOH HOH . J 5 HOH C 41 641 43 HOH HOH . J 5 HOH C 42 642 36 HOH HOH . J 5 HOH C 43 643 53 HOH HOH . J 5 HOH C 44 644 19 HOH HOH . J 5 HOH C 45 645 76 HOH HOH . J 5 HOH C 46 646 34 HOH HOH . J 5 HOH C 47 647 16 HOH HOH . J 5 HOH C 48 648 88 HOH HOH . J 5 HOH C 49 649 35 HOH HOH . J 5 HOH C 50 650 117 HOH HOH . J 5 HOH C 51 651 21 HOH HOH . J 5 HOH C 52 652 62 HOH HOH . J 5 HOH C 53 653 126 HOH HOH . J 5 HOH C 54 654 60 HOH HOH . J 5 HOH C 55 655 155 HOH HOH . J 5 HOH C 56 656 77 HOH HOH . J 5 HOH C 57 657 37 HOH HOH . J 5 HOH C 58 658 115 HOH HOH . J 5 HOH C 59 659 79 HOH HOH . J 5 HOH C 60 660 95 HOH HOH . J 5 HOH C 61 661 109 HOH HOH . J 5 HOH C 62 662 159 HOH HOH . J 5 HOH C 63 663 56 HOH HOH . J 5 HOH C 64 664 93 HOH HOH . J 5 HOH C 65 665 143 HOH HOH . J 5 HOH C 66 666 99 HOH HOH . J 5 HOH C 67 667 125 HOH HOH . J 5 HOH C 68 668 158 HOH HOH . J 5 HOH C 69 669 3 HOH HOH . J 5 HOH C 70 670 23 HOH HOH . J 5 HOH C 71 671 160 HOH HOH . J 5 HOH C 72 672 148 HOH HOH . K 5 HOH D 1 101 157 HOH HOH . K 5 HOH D 2 102 31 HOH HOH . K 5 HOH D 3 103 147 HOH HOH . K 5 HOH D 4 104 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 3 -15.618 -5.418 16.223 1 26.56 ? C1 EDO 501 A 1 HETATM 2 O O1 EDO . . . E 3 -16.75 -6.156 16.781 1 30.74 ? O1 EDO 501 A 1 HETATM 3 C C2 EDO . . . E 3 -14.458 -5.423 17.216 1 33.96 ? C2 EDO 501 A 1 HETATM 4 O O2 EDO . . . E 3 -14.019 -6.773 17.476 1 26.33 ? O2 EDO 501 A 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 27 _model_server_stats.create_model_time_ms 19 _model_server_stats.query_time_ms 348 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #