data_7SOV # _model_server_result.job_id A8JYA6knX5zOzvdspPKURQ _model_server_result.datetime_utc '2024-10-19 08:38:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sov # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":502}' # _entry.id 7SOV # _exptl.entry_id 7SOV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 92.094 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description GLYCEROL _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SOV _cell.length_a 36.785 _cell.length_b 46.307 _cell.length_c 58.625 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SOV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C3 H8 O3' _chem_comp.formula_weight 92.094 _chem_comp.id GOL _chem_comp.mon_nstd_flag . _chem_comp.name GLYCEROL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GLYCERIN;PROPANE-1,2,3-TRIOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 GOL sing 155 n n C1 C2 GOL sing 156 n n C1 H11 GOL sing 157 n n C1 H12 GOL sing 158 n n O1 HO1 GOL sing 159 n n C2 O2 GOL sing 160 n n C2 C3 GOL sing 161 n n C2 H2 GOL sing 162 n n O2 HO2 GOL sing 163 n n C3 O3 GOL sing 164 n n C3 H31 GOL sing 165 n n C3 H32 GOL sing 166 n n O3 HO3 GOL sing 167 n n # _atom_sites.entry_id 7SOV _atom_sites.fract_transf_matrix[1][1] 0.027185 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021595 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017058 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 A 1 501 1 SO4 SO4 . D 4 GOL A 1 502 1 GOL GOL . E 5 HOH A 1 601 31 HOH HOH . E 5 HOH A 2 602 11 HOH HOH . E 5 HOH A 3 603 58 HOH HOH . E 5 HOH A 4 604 35 HOH HOH . E 5 HOH A 5 605 57 HOH HOH . E 5 HOH A 6 606 29 HOH HOH . E 5 HOH A 7 607 50 HOH HOH . E 5 HOH A 8 608 21 HOH HOH . E 5 HOH A 9 609 66 HOH HOH . E 5 HOH A 10 610 27 HOH HOH . E 5 HOH A 11 611 14 HOH HOH . E 5 HOH A 12 612 4 HOH HOH . E 5 HOH A 13 613 38 HOH HOH . E 5 HOH A 14 614 17 HOH HOH . E 5 HOH A 15 615 5 HOH HOH . E 5 HOH A 16 616 18 HOH HOH . E 5 HOH A 17 617 12 HOH HOH . E 5 HOH A 18 618 20 HOH HOH . E 5 HOH A 19 619 19 HOH HOH . E 5 HOH A 20 620 9 HOH HOH . E 5 HOH A 21 621 63 HOH HOH . E 5 HOH A 22 622 22 HOH HOH . E 5 HOH A 23 623 64 HOH HOH . E 5 HOH A 24 624 40 HOH HOH . E 5 HOH A 25 625 32 HOH HOH . E 5 HOH A 26 626 3 HOH HOH . E 5 HOH A 27 627 15 HOH HOH . E 5 HOH A 28 628 41 HOH HOH . E 5 HOH A 29 629 34 HOH HOH . E 5 HOH A 30 630 55 HOH HOH . E 5 HOH A 31 631 56 HOH HOH . E 5 HOH A 32 632 48 HOH HOH . E 5 HOH A 33 633 6 HOH HOH . E 5 HOH A 34 634 47 HOH HOH . E 5 HOH A 35 635 13 HOH HOH . E 5 HOH A 36 636 65 HOH HOH . E 5 HOH A 37 637 23 HOH HOH . E 5 HOH A 38 638 61 HOH HOH . E 5 HOH A 39 639 52 HOH HOH . E 5 HOH A 40 640 26 HOH HOH . E 5 HOH A 41 641 36 HOH HOH . E 5 HOH A 42 642 7 HOH HOH . E 5 HOH A 43 643 24 HOH HOH . E 5 HOH A 44 644 43 HOH HOH . E 5 HOH A 45 645 45 HOH HOH . E 5 HOH A 46 646 30 HOH HOH . E 5 HOH A 47 647 49 HOH HOH . E 5 HOH A 48 648 62 HOH HOH . E 5 HOH A 49 649 25 HOH HOH . E 5 HOH A 50 650 37 HOH HOH . E 5 HOH A 51 651 46 HOH HOH . E 5 HOH A 52 652 44 HOH HOH . E 5 HOH A 53 653 59 HOH HOH . E 5 HOH A 54 654 33 HOH HOH . E 5 HOH A 55 655 16 HOH HOH . E 5 HOH A 56 656 53 HOH HOH . E 5 HOH A 57 657 42 HOH HOH . E 5 HOH A 58 658 54 HOH HOH . F 5 HOH B 1 101 8 HOH HOH . F 5 HOH B 2 102 51 HOH HOH . F 5 HOH B 3 103 28 HOH HOH . F 5 HOH B 4 104 60 HOH HOH . F 5 HOH B 5 105 39 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 GOL . . . D 4 6.827 31.305 30.249 1 38.35 ? C1 GOL 502 A 1 HETATM 2 O O1 GOL . . . D 4 5.585 30.692 29.989 1 34.1 ? O1 GOL 502 A 1 HETATM 3 C C2 GOL . . . D 4 7.094 32.38 29.149 1 44.35 ? C2 GOL 502 A 1 HETATM 4 O O2 GOL . . . D 4 6.246 33.463 29.339 1 55.54 ? O2 GOL 502 A 1 HETATM 5 C C3 GOL . . . D 4 8.624 32.787 29.34 1 37.6 ? C3 GOL 502 A 1 HETATM 6 O O3 GOL . . . D 4 9.336 32.736 28.089 1 33.21 ? O3 GOL 502 A 1 # _model_server_stats.io_time_ms 21 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 340 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 6 #