data_7SPH # _model_server_result.job_id 9E5vk-7PDJezWd77rmnGjg _model_server_result.datetime_utc '2024-11-25 11:18:17' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sph # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 7SPH # _exptl.entry_id 7SPH _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 31.999 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OXYGEN MOLECULE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 112.7 _cell.angle_gamma 90 _cell.entry_id 7SPH _cell.length_a 49.044 _cell.length_b 41.628 _cell.length_c 50.887 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SPH _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C GLU 5 A GLU 4 1_555 A N A3U 6 A A3U 5 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.267 ? covale ? covale2 A C A3U 6 A A3U 5 1_555 A N GLU 7 A GLU 6 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.232 ? covale ? covale3 A C2 A3U 6 A A3U 5 1_555 A SG CYS 127 A CYS 126 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.13 sing covale ? covale4 A C SER 36 A SER 35 1_555 A N A3U 37 A A3U 36 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale5 A C A3U 37 A A3U 36 1_555 A N PRO 38 A PRO 37 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale6 A C2 A3U 37 A A3U 36 1_555 A SG CYS 110 A CYS 109 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.772 ? metalc ? metalc1 A NE2 HIS 94 A HIS 93 1_555 B FE HEM . A HEM 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.115 ? metalc ? metalc2 B FE HEM . A HEM 201 1_555 C O1 OXY . A OXY 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.262 ? # _chem_comp.formula O2 _chem_comp.formula_weight 31.999 _chem_comp.id OXY _chem_comp.mon_nstd_flag . _chem_comp.name 'OXYGEN MOLECULE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _chem_comp_bond.atom_id_1 O1 _chem_comp_bond.atom_id_2 O2 _chem_comp_bond.comp_id OXY _chem_comp_bond.value_order doub _chem_comp_bond.pdbx_ordinal 349 _chem_comp_bond.pdbx_stereo_config n _chem_comp_bond.pdbx_aromatic_flag n # _atom_sites.entry_id 7SPH _atom_sites.fract_transf_matrix[1][1] 0.02039 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.008529 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024022 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.021301 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HEM A 1 201 202 HEM HEM . C 3 OXY A 1 202 301 OXY OXY . D 4 SO4 A 1 203 1 SO4 SO4 . E 4 SO4 A 1 204 2 SO4 SO4 . F 4 SO4 A 1 205 3 SO4 SO4 . G 5 HOH A 1 301 87 HOH HOH . G 5 HOH A 2 302 129 HOH HOH . G 5 HOH A 3 303 55 HOH HOH . G 5 HOH A 4 304 180 HOH HOH . G 5 HOH A 5 305 194 HOH HOH . G 5 HOH A 6 306 136 HOH HOH . G 5 HOH A 7 307 211 HOH HOH . G 5 HOH A 8 308 7 HOH HOH . G 5 HOH A 9 309 126 HOH HOH . G 5 HOH A 10 310 237 HOH HOH . G 5 HOH A 11 311 218 HOH HOH . G 5 HOH A 12 312 45 HOH HOH . G 5 HOH A 13 313 143 HOH HOH . G 5 HOH A 14 314 33 HOH HOH . G 5 HOH A 15 315 167 HOH HOH . G 5 HOH A 16 316 178 HOH HOH . G 5 HOH A 17 317 64 HOH HOH . G 5 HOH A 18 318 97 HOH HOH . G 5 HOH A 19 319 235 HOH HOH . G 5 HOH A 20 320 52 HOH HOH . G 5 HOH A 21 321 47 HOH HOH . G 5 HOH A 22 322 124 HOH HOH . G 5 HOH A 23 323 116 HOH HOH . G 5 HOH A 24 324 102 HOH HOH . G 5 HOH A 25 325 209 HOH HOH . G 5 HOH A 26 326 12 HOH HOH . G 5 HOH A 27 327 157 HOH HOH . G 5 HOH A 28 328 54 HOH HOH . G 5 HOH A 29 329 68 HOH HOH . G 5 HOH A 30 330 99 HOH HOH . G 5 HOH A 31 331 150 HOH HOH . G 5 HOH A 32 332 17 HOH HOH . G 5 HOH A 33 333 142 HOH HOH . G 5 HOH A 34 334 25 HOH HOH . G 5 HOH A 35 335 66 HOH HOH . G 5 HOH A 36 336 94 HOH HOH . G 5 HOH A 37 337 5 HOH HOH . G 5 HOH A 38 338 1 HOH HOH . G 5 HOH A 39 339 31 HOH HOH . G 5 HOH A 40 340 58 HOH HOH . G 5 HOH A 41 341 62 HOH HOH . G 5 HOH A 42 342 28 HOH HOH . G 5 HOH A 43 343 76 HOH HOH . G 5 HOH A 44 344 88 HOH HOH . G 5 HOH A 45 345 10 HOH HOH . G 5 HOH A 46 346 22 HOH HOH . G 5 HOH A 47 347 34 HOH HOH . G 5 HOH A 48 348 78 HOH HOH . G 5 HOH A 49 349 35 HOH HOH . G 5 HOH A 50 350 9 HOH HOH . G 5 HOH A 51 351 51 HOH HOH . G 5 HOH A 52 352 181 HOH HOH . G 5 HOH A 53 353 144 HOH HOH . G 5 HOH A 54 354 38 HOH HOH . G 5 HOH A 55 355 21 HOH HOH . G 5 HOH A 56 356 103 HOH HOH . G 5 HOH A 57 357 2 HOH HOH . G 5 HOH A 58 358 117 HOH HOH . G 5 HOH A 59 359 236 HOH HOH . G 5 HOH A 60 360 98 HOH HOH . G 5 HOH A 61 361 61 HOH HOH . G 5 HOH A 62 362 6 HOH HOH . G 5 HOH A 63 363 109 HOH HOH . G 5 HOH A 64 364 198 HOH HOH . G 5 HOH A 65 365 71 HOH HOH . G 5 HOH A 66 366 135 HOH HOH . G 5 HOH A 67 367 77 HOH HOH . G 5 HOH A 68 368 69 HOH HOH . G 5 HOH A 69 369 95 HOH HOH . G 5 HOH A 70 370 226 HOH HOH . G 5 HOH A 71 371 30 HOH HOH . G 5 HOH A 72 372 101 HOH HOH . G 5 HOH A 73 373 29 HOH HOH . G 5 HOH A 74 374 82 HOH HOH . G 5 HOH A 75 375 219 HOH HOH . G 5 HOH A 76 376 4 HOH HOH . G 5 HOH A 77 377 90 HOH HOH . G 5 HOH A 78 378 140 HOH HOH . G 5 HOH A 79 379 187 HOH HOH . G 5 HOH A 80 380 121 HOH HOH . G 5 HOH A 81 381 108 HOH HOH . G 5 HOH A 82 382 190 HOH HOH . G 5 HOH A 83 383 16 HOH HOH . G 5 HOH A 84 384 27 HOH HOH . G 5 HOH A 85 385 216 HOH HOH . G 5 HOH A 86 386 24 HOH HOH . G 5 HOH A 87 387 74 HOH HOH . G 5 HOH A 88 388 118 HOH HOH . G 5 HOH A 89 389 13 HOH HOH . G 5 HOH A 90 390 53 HOH HOH . G 5 HOH A 91 391 96 HOH HOH . G 5 HOH A 92 392 36 HOH HOH . G 5 HOH A 93 393 65 HOH HOH . G 5 HOH A 94 394 63 HOH HOH . G 5 HOH A 95 395 23 HOH HOH . G 5 HOH A 96 396 119 HOH HOH . G 5 HOH A 97 397 18 HOH HOH . G 5 HOH A 98 398 19 HOH HOH . G 5 HOH A 99 399 164 HOH HOH . G 5 HOH A 100 400 156 HOH HOH . G 5 HOH A 101 401 42 HOH HOH . G 5 HOH A 102 402 20 HOH HOH . G 5 HOH A 103 403 91 HOH HOH . G 5 HOH A 104 404 67 HOH HOH . G 5 HOH A 105 405 104 HOH HOH . G 5 HOH A 106 406 93 HOH HOH . G 5 HOH A 107 407 215 HOH HOH . G 5 HOH A 108 408 40 HOH HOH . G 5 HOH A 109 409 183 HOH HOH . G 5 HOH A 110 410 48 HOH HOH . G 5 HOH A 111 411 222 HOH HOH . G 5 HOH A 112 412 139 HOH HOH . G 5 HOH A 113 413 188 HOH HOH . G 5 HOH A 114 414 37 HOH HOH . G 5 HOH A 115 415 8 HOH HOH . G 5 HOH A 116 416 56 HOH HOH . G 5 HOH A 117 417 214 HOH HOH . G 5 HOH A 118 418 73 HOH HOH . G 5 HOH A 119 419 158 HOH HOH . G 5 HOH A 120 420 197 HOH HOH . G 5 HOH A 121 421 15 HOH HOH . G 5 HOH A 122 422 89 HOH HOH . G 5 HOH A 123 423 220 HOH HOH . G 5 HOH A 124 424 175 HOH HOH . G 5 HOH A 125 425 32 HOH HOH . G 5 HOH A 126 426 112 HOH HOH . G 5 HOH A 127 427 238 HOH HOH . G 5 HOH A 128 428 174 HOH HOH . G 5 HOH A 129 429 39 HOH HOH . G 5 HOH A 130 430 131 HOH HOH . G 5 HOH A 131 431 49 HOH HOH . G 5 HOH A 132 432 132 HOH HOH . G 5 HOH A 133 433 100 HOH HOH . G 5 HOH A 134 434 192 HOH HOH . G 5 HOH A 135 435 168 HOH HOH . G 5 HOH A 136 436 85 HOH HOH . G 5 HOH A 137 437 155 HOH HOH . G 5 HOH A 138 438 206 HOH HOH . G 5 HOH A 139 439 185 HOH HOH . G 5 HOH A 140 440 43 HOH HOH . G 5 HOH A 141 441 231 HOH HOH . G 5 HOH A 142 442 182 HOH HOH . G 5 HOH A 143 443 70 HOH HOH . G 5 HOH A 144 444 203 HOH HOH . G 5 HOH A 145 445 134 HOH HOH . G 5 HOH A 146 446 200 HOH HOH . G 5 HOH A 147 447 173 HOH HOH . G 5 HOH A 148 448 153 HOH HOH . G 5 HOH A 149 449 125 HOH HOH . G 5 HOH A 150 450 233 HOH HOH . G 5 HOH A 151 451 120 HOH HOH . G 5 HOH A 152 452 11 HOH HOH . G 5 HOH A 153 453 213 HOH HOH . G 5 HOH A 154 454 165 HOH HOH . G 5 HOH A 155 455 111 HOH HOH . G 5 HOH A 156 456 130 HOH HOH . G 5 HOH A 157 457 138 HOH HOH . G 5 HOH A 158 458 202 HOH HOH . G 5 HOH A 159 459 221 HOH HOH . G 5 HOH A 160 460 224 HOH HOH . G 5 HOH A 161 461 84 HOH HOH . G 5 HOH A 162 462 189 HOH HOH . G 5 HOH A 163 463 228 HOH HOH . G 5 HOH A 164 464 127 HOH HOH . G 5 HOH A 165 465 72 HOH HOH . G 5 HOH A 166 466 234 HOH HOH . G 5 HOH A 167 467 149 HOH HOH . G 5 HOH A 168 468 137 HOH HOH . G 5 HOH A 169 469 208 HOH HOH . G 5 HOH A 170 470 83 HOH HOH . G 5 HOH A 171 471 141 HOH HOH . G 5 HOH A 172 472 122 HOH HOH . G 5 HOH A 173 473 79 HOH HOH . G 5 HOH A 174 474 41 HOH HOH . G 5 HOH A 175 475 166 HOH HOH . G 5 HOH A 176 476 128 HOH HOH . G 5 HOH A 177 477 57 HOH HOH . G 5 HOH A 178 478 147 HOH HOH . G 5 HOH A 179 479 205 HOH HOH . G 5 HOH A 180 480 146 HOH HOH . G 5 HOH A 181 481 239 HOH HOH . G 5 HOH A 182 482 154 HOH HOH . G 5 HOH A 183 483 186 HOH HOH . G 5 HOH A 184 484 148 HOH HOH . G 5 HOH A 185 485 227 HOH HOH . G 5 HOH A 186 486 152 HOH HOH . G 5 HOH A 187 487 115 HOH HOH . G 5 HOH A 188 488 86 HOH HOH . G 5 HOH A 189 489 195 HOH HOH . G 5 HOH A 190 490 201 HOH HOH . G 5 HOH A 191 491 191 HOH HOH . G 5 HOH A 192 492 225 HOH HOH . G 5 HOH A 193 493 229 HOH HOH . G 5 HOH A 194 494 212 HOH HOH . G 5 HOH A 195 495 44 HOH HOH . G 5 HOH A 196 496 232 HOH HOH . G 5 HOH A 197 497 204 HOH HOH . G 5 HOH A 198 498 105 HOH HOH . G 5 HOH A 199 499 179 HOH HOH . G 5 HOH A 200 500 81 HOH HOH . G 5 HOH A 201 501 159 HOH HOH . G 5 HOH A 202 502 151 HOH HOH . G 5 HOH A 203 503 199 HOH HOH . G 5 HOH A 204 504 114 HOH HOH . G 5 HOH A 205 505 170 HOH HOH . G 5 HOH A 206 506 184 HOH HOH . G 5 HOH A 207 507 92 HOH HOH . G 5 HOH A 208 508 110 HOH HOH . G 5 HOH A 209 509 210 HOH HOH . G 5 HOH A 210 510 169 HOH HOH . G 5 HOH A 211 511 163 HOH HOH . G 5 HOH A 212 512 60 HOH HOH . G 5 HOH A 213 513 193 HOH HOH . G 5 HOH A 214 514 113 HOH HOH . G 5 HOH A 215 515 80 HOH HOH . G 5 HOH A 216 516 46 HOH HOH . G 5 HOH A 217 517 106 HOH HOH . G 5 HOH A 218 518 107 HOH HOH . G 5 HOH A 219 519 223 HOH HOH . G 5 HOH A 220 520 75 HOH HOH . G 5 HOH A 221 521 177 HOH HOH . G 5 HOH A 222 522 160 HOH HOH . G 5 HOH A 223 523 171 HOH HOH . G 5 HOH A 224 524 217 HOH HOH . G 5 HOH A 225 525 196 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 OXY . . . C 3 8.917 3.476 12.079 1 22.36 ? O1 OXY 202 A 1 HETATM 2 O O2 OXY . . . C 3 8.881 2.356 12.555 1 26.66 ? O2 OXY 202 A 1 # _model_server_stats.io_time_ms 54 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 293 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 2 #