data_7SPS # _model_server_result.job_id bFMX4ym185-QJGe9rxAYmQ _model_server_result.datetime_utc '2024-11-21 14:39:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sps # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":503}' # _entry.id 7SPS # _exptl.entry_id 7SPS _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 356.54 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 108.14 _cell.angle_gamma 90 _cell.entry_id 7SPS _cell.length_a 77.591 _cell.length_b 121.552 _cell.length_c 95.872 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SPS _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,J 1 1 B,F,G,H,I,K 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N ? 3 G N N ? 3 H N N ? 3 I N N # _chem_comp.formula 'C21 H40 O4' _chem_comp.formula_weight 356.54 _chem_comp.id OLC _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-Oleoyl-R-glycerol # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C18 C17 OLC sing 309 n n C10 C9 OLC doub 310 n n C10 C11 OLC sing 311 n n C9 C8 OLC sing 312 n n C17 C16 OLC sing 313 z n C11 C12 OLC sing 314 n n C8 C7 OLC sing 315 n n C24 C22 OLC sing 316 n n C24 O25 OLC sing 317 n n C16 C15 OLC sing 318 n n C12 C13 OLC sing 319 n n C7 C6 OLC sing 320 n n C15 C14 OLC sing 321 n n C13 C14 OLC sing 322 n n C6 C5 OLC sing 323 n n C5 C4 OLC sing 324 n n C4 C3 OLC sing 325 n n C3 C2 OLC sing 326 n n C2 C1 OLC sing 327 n n C21 C22 OLC sing 328 n n C21 O20 OLC sing 329 n n C1 O19 OLC doub 330 n n C1 O20 OLC sing 331 n n C22 O23 OLC sing 332 n n C18 H18 OLC sing 333 n n C18 H18A OLC sing 334 n n C18 H18B OLC sing 335 n n C10 H10 OLC sing 336 n n C9 H9 OLC sing 337 n n C17 H17 OLC sing 338 n n C17 H17A OLC sing 339 n n C11 H11 OLC sing 340 n n C11 H11A OLC sing 341 n n C8 H8 OLC sing 342 n n C8 H8A OLC sing 343 n n C24 H24 OLC sing 344 n n C24 H24A OLC sing 345 n n C16 H16 OLC sing 346 n n C16 H16A OLC sing 347 n n C12 H12 OLC sing 348 n n C12 H12A OLC sing 349 n n C7 H7 OLC sing 350 n n C7 H7A OLC sing 351 n n C15 H15 OLC sing 352 n n C15 H15A OLC sing 353 n n C13 H13 OLC sing 354 n n C13 H13A OLC sing 355 n n C6 H6 OLC sing 356 n n C6 H6A OLC sing 357 n n C14 H14 OLC sing 358 n n C14 H14A OLC sing 359 n n C5 H5 OLC sing 360 n n C5 H5A OLC sing 361 n n C4 H4 OLC sing 362 n n C4 H4A OLC sing 363 n n C3 H3 OLC sing 364 n n C3 H3A OLC sing 365 n n C2 H2 OLC sing 366 n n C2 H2A OLC sing 367 n n C21 H21 OLC sing 368 n n C21 H21A OLC sing 369 n n C22 H22 OLC sing 370 n n O25 HO25 OLC sing 371 n n O23 HO23 OLC sing 372 n n # _atom_sites.entry_id 7SPS _atom_sites.fract_transf_matrix[1][1] 0.012888 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.004221 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008227 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010976 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 A0E A 1 501 500 A0E DRG . D 3 OLC A 1 502 1 OLC OLC . E 3 OLC A 1 503 5 OLC OLC . F 2 A0E B 1 501 500 A0E DRG . G 3 OLC B 1 502 2 OLC OLC . H 3 OLC B 1 503 3 OLC OLC . I 3 OLC B 1 504 4 OLC OLC . J 4 HOH A 1 601 524 HOH HOH . J 4 HOH A 2 602 557 HOH HOH . J 4 HOH A 3 603 503 HOH HOH . J 4 HOH A 4 604 506 HOH HOH . J 4 HOH A 5 605 567 HOH HOH . J 4 HOH A 6 606 523 HOH HOH . J 4 HOH A 7 607 514 HOH HOH . J 4 HOH A 8 608 569 HOH HOH . J 4 HOH A 9 609 529 HOH HOH . J 4 HOH A 10 610 559 HOH HOH . J 4 HOH A 11 611 511 HOH HOH . J 4 HOH A 12 612 528 HOH HOH . J 4 HOH A 13 613 510 HOH HOH . J 4 HOH A 14 614 558 HOH HOH . J 4 HOH A 15 615 509 HOH HOH . J 4 HOH A 16 616 505 HOH HOH . J 4 HOH A 17 617 502 HOH HOH . J 4 HOH A 18 618 501 HOH HOH . J 4 HOH A 19 619 552 HOH HOH . J 4 HOH A 20 620 508 HOH HOH . J 4 HOH A 21 621 504 HOH HOH . J 4 HOH A 22 622 553 HOH HOH . J 4 HOH A 23 623 555 HOH HOH . J 4 HOH A 24 624 527 HOH HOH . J 4 HOH A 25 625 519 HOH HOH . J 4 HOH A 26 626 512 HOH HOH . J 4 HOH A 27 627 534 HOH HOH . J 4 HOH A 28 628 518 HOH HOH . J 4 HOH A 29 629 560 HOH HOH . J 4 HOH A 30 630 513 HOH HOH . J 4 HOH A 31 631 550 HOH HOH . J 4 HOH A 32 632 522 HOH HOH . J 4 HOH A 33 633 561 HOH HOH . J 4 HOH A 34 634 516 HOH HOH . J 4 HOH A 35 635 517 HOH HOH . J 4 HOH A 36 636 536 HOH HOH . J 4 HOH A 37 637 563 HOH HOH . J 4 HOH A 38 638 554 HOH HOH . J 4 HOH A 39 639 538 HOH HOH . J 4 HOH A 40 640 556 HOH HOH . J 4 HOH A 41 641 565 HOH HOH . J 4 HOH A 42 642 551 HOH HOH . J 4 HOH A 43 643 515 HOH HOH . J 4 HOH A 44 644 520 HOH HOH . J 4 HOH A 45 645 537 HOH HOH . J 4 HOH A 46 646 507 HOH HOH . K 4 HOH B 1 601 567 HOH HOH . K 4 HOH B 2 602 580 HOH HOH . K 4 HOH B 3 603 524 HOH HOH . K 4 HOH B 4 604 557 HOH HOH . K 4 HOH B 5 605 569 HOH HOH . K 4 HOH B 6 606 552 HOH HOH . K 4 HOH B 7 607 571 HOH HOH . K 4 HOH B 8 608 581 HOH HOH . K 4 HOH B 9 609 510 HOH HOH . K 4 HOH B 10 610 516 HOH HOH . K 4 HOH B 11 611 519 HOH HOH . K 4 HOH B 12 612 560 HOH HOH . K 4 HOH B 13 613 570 HOH HOH . K 4 HOH B 14 614 563 HOH HOH . K 4 HOH B 15 615 578 HOH HOH . K 4 HOH B 16 616 504 HOH HOH . K 4 HOH B 17 617 502 HOH HOH . K 4 HOH B 18 618 592 HOH HOH . K 4 HOH B 19 619 576 HOH HOH . K 4 HOH B 20 620 505 HOH HOH . K 4 HOH B 21 621 559 HOH HOH . K 4 HOH B 22 622 597 HOH HOH . K 4 HOH B 23 623 523 HOH HOH . K 4 HOH B 24 624 596 HOH HOH . K 4 HOH B 25 625 562 HOH HOH . K 4 HOH B 26 626 531 HOH HOH . K 4 HOH B 27 627 593 HOH HOH . K 4 HOH B 28 628 514 HOH HOH . K 4 HOH B 29 629 568 HOH HOH . K 4 HOH B 30 630 594 HOH HOH . K 4 HOH B 31 631 534 HOH HOH . K 4 HOH B 32 632 509 HOH HOH . K 4 HOH B 33 633 508 HOH HOH . K 4 HOH B 34 634 528 HOH HOH . K 4 HOH B 35 635 513 HOH HOH . K 4 HOH B 36 636 577 HOH HOH . K 4 HOH B 37 637 591 HOH HOH . K 4 HOH B 38 638 506 HOH HOH . K 4 HOH B 39 639 503 HOH HOH . K 4 HOH B 40 640 588 HOH HOH . K 4 HOH B 41 641 556 HOH HOH . K 4 HOH B 42 642 554 HOH HOH . K 4 HOH B 43 643 558 HOH HOH . K 4 HOH B 44 644 518 HOH HOH . K 4 HOH B 45 645 511 HOH HOH . K 4 HOH B 46 646 584 HOH HOH . K 4 HOH B 47 647 585 HOH HOH . K 4 HOH B 48 648 517 HOH HOH . K 4 HOH B 49 649 527 HOH HOH . K 4 HOH B 50 650 529 HOH HOH . K 4 HOH B 51 651 599 HOH HOH . K 4 HOH B 52 652 575 HOH HOH . K 4 HOH B 53 653 521 HOH HOH . K 4 HOH B 54 654 561 HOH HOH . K 4 HOH B 55 655 598 HOH HOH . K 4 HOH B 56 656 553 HOH HOH . K 4 HOH B 57 657 520 HOH HOH . K 4 HOH B 58 658 589 HOH HOH . K 4 HOH B 59 659 550 HOH HOH . K 4 HOH B 60 660 501 HOH HOH . K 4 HOH B 61 661 512 HOH HOH . K 4 HOH B 62 662 579 HOH HOH . K 4 HOH B 63 663 572 HOH HOH . K 4 HOH B 64 664 573 HOH HOH . K 4 HOH B 65 665 595 HOH HOH . K 4 HOH B 66 666 587 HOH HOH . K 4 HOH B 67 667 522 HOH HOH . K 4 HOH B 68 668 590 HOH HOH . K 4 HOH B 69 669 551 HOH HOH . K 4 HOH B 70 670 586 HOH HOH . K 4 HOH B 71 671 574 HOH HOH . K 4 HOH B 72 672 507 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C18 OLC . . . E 3 79.347 27.242 197.517 1 93.44 ? C18 OLC 503 A 1 HETATM 2 C C10 OLC . . . E 3 76.016 18.612 198.161 1 79.07 ? C10 OLC 503 A 1 HETATM 3 C C9 OLC . . . E 3 77.086 17.827 198.251 1 81.56 ? C9 OLC 503 A 1 HETATM 4 C C17 OLC . . . E 3 78.96 25.845 197.083 1 90.18 ? C17 OLC 503 A 1 HETATM 5 C C11 OLC . . . E 3 75.937 19.66 197.077 1 88.02 ? C11 OLC 503 A 1 HETATM 6 C C8 OLC . . . E 3 77.165 16.779 199.335 1 68.97 ? C8 OLC 503 A 1 HETATM 7 C C24 OLC . . . E 3 87.747 10.442 201.731 1 73.11 ? C24 OLC 503 A 1 HETATM 8 C C16 OLC . . . E 3 77.477 25.59 197.322 1 98.31 ? C16 OLC 503 A 1 HETATM 9 C C12 OLC . . . E 3 77.08 20.653 197.246 1 86.33 ? C12 OLC 503 A 1 HETATM 10 C C7 OLC . . . E 3 78.587 16.716 199.879 1 84.9 ? C7 OLC 503 A 1 HETATM 11 C C15 OLC . . . E 3 76.985 24.411 196.492 1 106.31 ? C15 OLC 503 A 1 HETATM 12 C C13 OLC . . . E 3 76.845 21.904 196.408 1 91.98 ? C13 OLC 503 A 1 HETATM 13 C C6 OLC . . . E 3 79.086 15.278 199.938 1 78.35 ? C6 OLC 503 A 1 HETATM 14 C C14 OLC . . . E 3 77.581 23.102 196.997 1 92.42 ? C14 OLC 503 A 1 HETATM 15 C C5 OLC . . . E 3 80.473 15.206 200.565 1 74.64 ? C5 OLC 503 A 1 HETATM 16 C C4 OLC . . . E 3 81.293 14.079 199.948 1 75.36 ? C4 OLC 503 A 1 HETATM 17 C C3 OLC . . . E 3 82.138 13.377 201.004 1 75.24 ? C3 OLC 503 A 1 HETATM 18 C C2 OLC . . . E 3 83.508 13.005 200.449 1 81.72 ? C2 OLC 503 A 1 HETATM 19 C C21 OLC . . . E 3 85.957 10.565 200.007 1 93.14 ? C21 OLC 503 A 1 HETATM 20 C C1 OLC . . . E 3 83.851 11.593 200.861 1 86.78 ? C1 OLC 503 A 1 HETATM 21 C C22 OLC . . . E 3 87.054 9.69 200.602 1 90.86 ? C22 OLC 503 A 1 HETATM 22 O O19 OLC . . . E 3 82.973 10.764 201.032 1 78.65 ? O19 OLC 503 A 1 HETATM 23 O O25 OLC . . . E 3 88.758 9.609 202.31 1 74.16 ? O25 OLC 503 A 1 HETATM 24 O O23 OLC . . . E 3 86.477 8.484 201.115 1 86.32 ? O23 OLC 503 A 1 HETATM 25 O O20 OLC . . . E 3 85.239 11.207 201.058 1 92.31 ? O20 OLC 503 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 15 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 25 #