data_7SR9
#
_model_server_result.job_id            1b7-Bqdl0qIKjWuPBfDjAw 
_model_server_result.datetime_utc      '2024-11-27 00:16:33' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7sr9 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":401}' 
#
_entry.id    7SR9 
#
_exptl.entry_id    7SR9 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              221.208 
_entity.id                          4 
_entity.src_method                  man 
_entity.type                        non-polymer 
_entity.pdbx_description            2-acetamido-2-deoxy-beta-D-glucopyranose 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          103.22 
_cell.angle_gamma         90 
_cell.entry_id            7SR9 
_cell.length_a            98.969 
_cell.length_b            78.525 
_cell.length_c            49.602 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7SR9 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      4 
_struct_asym.id                             D 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 8 A CYS 1 1_555 B SG CYS 119 B CYS 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.072 ? 
disulf ? disulf2 B SG CYS 28 B CYS 42 1_555 B SG CYS 44 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.053 ? 
disulf ? disulf3 B SG CYS 173 B CYS 168 1_555 B SG CYS 187 B CYS 182 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? 
disulf ? disulf4 B SG CYS 198 B CYS 191 1_555 B SG CYS 228 B CYS 220 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.054 ? 
covale ? covale1 B ND2 ASN 53 B ASN 60 1_555 D C1 NAG . B NAG 401 1_555 G ? ? ? ? ? ? ? ? ? ? ? 1.44 ? 
#
_chem_comp.formula           'C8 H15 N O6' 
_chem_comp.formula_weight    221.208 
_chem_comp.id                NAG 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              2-acetamido-2-deoxy-beta-D-glucopyranose 
_chem_comp.type              'd-saccharide, beta linking' 
_chem_comp.pdbx_synonyms     N-acetyl-beta-D-glucosamine;2-acetamido-2-deoxy-beta-D-glucose;2-acetamido-2-deoxy-D-glucose;2-acetamido-2-deoxy-glucose;N-ACETYL-D-GLUCOSAMINE 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 C2 NAG sing 250 n n 
C1 O1 NAG sing 251 n n 
C1 O5 NAG sing 252 n n 
C1 H1 NAG sing 253 n n 
C2 C3 NAG sing 254 n n 
C2 N2 NAG sing 255 n n 
C2 H2 NAG sing 256 n n 
C3 C4 NAG sing 257 n n 
C3 O3 NAG sing 258 n n 
C3 H3 NAG sing 259 n n 
C4 C5 NAG sing 260 n n 
C4 O4 NAG sing 261 n n 
C4 H4 NAG sing 262 n n 
C5 C6 NAG sing 263 n n 
C5 O5 NAG sing 264 n n 
C5 H5 NAG sing 265 n n 
C6 O6 NAG sing 266 n n 
C6 H61 NAG sing 267 n n 
C6 H62 NAG sing 268 n n 
C7 C8 NAG sing 269 n n 
C7 N2 NAG sing 270 n n 
C7 O7 NAG doub 271 n n 
C8 H81 NAG sing 272 n n 
C8 H82 NAG sing 273 n n 
C8 H83 NAG sing 274 n n 
N2 HN2 NAG sing 275 n n 
O1 HO1 NAG sing 276 n n 
O3 HO3 NAG sing 277 n n 
O4 HO4 NAG sing 278 n n 
O6 HO6 NAG sing 279 n n 
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.identifier
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
NAG DGlcpNAcb 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1 
NAG N-acetyl-b-D-glucopyranosamine 'COMMON NAME' GMML 1 
NAG b-D-GlcpNAc 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1 
NAG GlcNAc 'SNFG CARBOHYDRATE SYMBOL' GMML 1 
#
_atom_sites.entry_id                     7SR9 
_atom_sites.fract_transf_matrix[1][1]    0.010104 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.002373 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012735 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.020709 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 SO4 A 1 101 406 SO4 SO4 . 
D 4 NAG B 1 401 401 NAG NAG . 
E 3 SO4 B 1 402 402 SO4 SO4 . 
F 3 SO4 B 1 403 403 SO4 SO4 . 
G 3 SO4 B 1 404 404 SO4 SO4 . 
H 3 SO4 B 1 405 405 SO4 SO4 . 
I 5 GOL B 1 406 407 GOL GOL . 
J 6 HOH A 1 201 143 HOH HOH . 
J 6 HOH A 2 202 149 HOH HOH . 
J 6 HOH A 3 203 21 HOH HOH . 
J 6 HOH A 4 204 154 HOH HOH . 
J 6 HOH A 5 205 40 HOH HOH . 
J 6 HOH A 6 206 32 HOH HOH . 
J 6 HOH A 7 207 172 HOH HOH . 
J 6 HOH A 8 208 113 HOH HOH . 
J 6 HOH A 9 209 52 HOH HOH . 
J 6 HOH A 10 210 173 HOH HOH . 
J 6 HOH A 11 211 9 HOH HOH . 
J 6 HOH A 12 212 132 HOH HOH . 
J 6 HOH A 13 213 151 HOH HOH . 
J 6 HOH A 14 214 86 HOH HOH . 
J 6 HOH A 15 215 102 HOH HOH . 
J 6 HOH A 16 216 126 HOH HOH . 
J 6 HOH A 17 217 48 HOH HOH . 
J 6 HOH A 18 218 38 HOH HOH . 
J 6 HOH A 19 219 104 HOH HOH . 
J 6 HOH A 20 220 117 HOH HOH . 
J 6 HOH A 21 221 152 HOH HOH . 
J 6 HOH A 22 222 57 HOH HOH . 
J 6 HOH A 23 223 79 HOH HOH . 
J 6 HOH A 24 224 26 HOH HOH . 
J 6 HOH A 25 225 153 HOH HOH . 
J 6 HOH A 26 226 155 HOH HOH . 
J 6 HOH A 27 227 147 HOH HOH . 
J 6 HOH A 28 228 148 HOH HOH . 
J 6 HOH A 29 229 111 HOH HOH . 
K 6 HOH B 1 501 119 HOH HOH . 
K 6 HOH B 2 502 107 HOH HOH . 
K 6 HOH B 3 503 90 HOH HOH . 
K 6 HOH B 4 504 49 HOH HOH . 
K 6 HOH B 5 505 135 HOH HOH . 
K 6 HOH B 6 506 11 HOH HOH . 
K 6 HOH B 7 507 30 HOH HOH . 
K 6 HOH B 8 508 94 HOH HOH . 
K 6 HOH B 9 509 31 HOH HOH . 
K 6 HOH B 10 510 65 HOH HOH . 
K 6 HOH B 11 511 108 HOH HOH . 
K 6 HOH B 12 512 37 HOH HOH . 
K 6 HOH B 13 513 28 HOH HOH . 
K 6 HOH B 14 514 27 HOH HOH . 
K 6 HOH B 15 515 35 HOH HOH . 
K 6 HOH B 16 516 72 HOH HOH . 
K 6 HOH B 17 517 51 HOH HOH . 
K 6 HOH B 18 518 58 HOH HOH . 
K 6 HOH B 19 519 33 HOH HOH . 
K 6 HOH B 20 520 68 HOH HOH . 
K 6 HOH B 21 521 82 HOH HOH . 
K 6 HOH B 22 522 34 HOH HOH . 
K 6 HOH B 23 523 81 HOH HOH . 
K 6 HOH B 24 524 85 HOH HOH . 
K 6 HOH B 25 525 39 HOH HOH . 
K 6 HOH B 26 526 123 HOH HOH . 
K 6 HOH B 27 527 133 HOH HOH . 
K 6 HOH B 28 528 96 HOH HOH . 
K 6 HOH B 29 529 43 HOH HOH . 
K 6 HOH B 30 530 89 HOH HOH . 
K 6 HOH B 31 531 121 HOH HOH . 
K 6 HOH B 32 532 98 HOH HOH . 
K 6 HOH B 33 533 24 HOH HOH . 
K 6 HOH B 34 534 36 HOH HOH . 
K 6 HOH B 35 535 97 HOH HOH . 
K 6 HOH B 36 536 77 HOH HOH . 
K 6 HOH B 37 537 41 HOH HOH . 
K 6 HOH B 38 538 122 HOH HOH . 
K 6 HOH B 39 539 63 HOH HOH . 
K 6 HOH B 40 540 84 HOH HOH . 
K 6 HOH B 41 541 4 HOH HOH . 
K 6 HOH B 42 542 15 HOH HOH . 
K 6 HOH B 43 543 156 HOH HOH . 
K 6 HOH B 44 544 75 HOH HOH . 
K 6 HOH B 45 545 29 HOH HOH . 
K 6 HOH B 46 546 87 HOH HOH . 
K 6 HOH B 47 547 64 HOH HOH . 
K 6 HOH B 48 548 80 HOH HOH . 
K 6 HOH B 49 549 23 HOH HOH . 
K 6 HOH B 50 550 125 HOH HOH . 
K 6 HOH B 51 551 74 HOH HOH . 
K 6 HOH B 52 552 136 HOH HOH . 
K 6 HOH B 53 553 44 HOH HOH . 
K 6 HOH B 54 554 129 HOH HOH . 
K 6 HOH B 55 555 105 HOH HOH . 
K 6 HOH B 56 556 19 HOH HOH . 
K 6 HOH B 57 557 62 HOH HOH . 
K 6 HOH B 58 558 120 HOH HOH . 
K 6 HOH B 59 559 115 HOH HOH . 
K 6 HOH B 60 560 1 HOH HOH . 
K 6 HOH B 61 561 54 HOH HOH . 
K 6 HOH B 62 562 91 HOH HOH . 
K 6 HOH B 63 563 138 HOH HOH . 
K 6 HOH B 64 564 116 HOH HOH . 
K 6 HOH B 65 565 92 HOH HOH . 
K 6 HOH B 66 566 46 HOH HOH . 
K 6 HOH B 67 567 60 HOH HOH . 
K 6 HOH B 68 568 3 HOH HOH . 
K 6 HOH B 69 569 42 HOH HOH . 
K 6 HOH B 70 570 83 HOH HOH . 
K 6 HOH B 71 571 13 HOH HOH . 
K 6 HOH B 72 572 47 HOH HOH . 
K 6 HOH B 73 573 145 HOH HOH . 
K 6 HOH B 74 574 56 HOH HOH . 
K 6 HOH B 75 575 25 HOH HOH . 
K 6 HOH B 76 576 22 HOH HOH . 
K 6 HOH B 77 577 130 HOH HOH . 
K 6 HOH B 78 578 61 HOH HOH . 
K 6 HOH B 79 579 45 HOH HOH . 
K 6 HOH B 80 580 131 HOH HOH . 
K 6 HOH B 81 581 12 HOH HOH . 
K 6 HOH B 82 582 70 HOH HOH . 
K 6 HOH B 83 583 127 HOH HOH . 
K 6 HOH B 84 584 10 HOH HOH . 
K 6 HOH B 85 585 159 HOH HOH . 
K 6 HOH B 86 586 95 HOH HOH . 
K 6 HOH B 87 587 16 HOH HOH . 
K 6 HOH B 88 588 8 HOH HOH . 
K 6 HOH B 89 589 100 HOH HOH . 
K 6 HOH B 90 590 18 HOH HOH . 
K 6 HOH B 91 591 99 HOH HOH . 
K 6 HOH B 92 592 144 HOH HOH . 
K 6 HOH B 93 593 160 HOH HOH . 
K 6 HOH B 94 594 17 HOH HOH . 
K 6 HOH B 95 595 6 HOH HOH . 
K 6 HOH B 96 596 71 HOH HOH . 
K 6 HOH B 97 597 128 HOH HOH . 
K 6 HOH B 98 598 137 HOH HOH . 
K 6 HOH B 99 599 73 HOH HOH . 
K 6 HOH B 100 600 55 HOH HOH . 
K 6 HOH B 101 601 7 HOH HOH . 
K 6 HOH B 102 602 142 HOH HOH . 
K 6 HOH B 103 603 67 HOH HOH . 
K 6 HOH B 104 604 14 HOH HOH . 
K 6 HOH B 105 605 141 HOH HOH . 
K 6 HOH B 106 606 5 HOH HOH . 
K 6 HOH B 107 607 78 HOH HOH . 
K 6 HOH B 108 608 69 HOH HOH . 
K 6 HOH B 109 609 103 HOH HOH . 
K 6 HOH B 110 610 146 HOH HOH . 
K 6 HOH B 111 611 2 HOH HOH . 
K 6 HOH B 112 612 106 HOH HOH . 
K 6 HOH B 113 613 50 HOH HOH . 
K 6 HOH B 114 614 162 HOH HOH . 
K 6 HOH B 115 615 59 HOH HOH . 
K 6 HOH B 116 616 167 HOH HOH . 
K 6 HOH B 117 617 161 HOH HOH . 
K 6 HOH B 118 618 163 HOH HOH . 
K 6 HOH B 119 619 20 HOH HOH . 
K 6 HOH B 120 620 157 HOH HOH . 
K 6 HOH B 121 621 170 HOH HOH . 
K 6 HOH B 122 622 110 HOH HOH . 
K 6 HOH B 123 623 66 HOH HOH . 
K 6 HOH B 124 624 101 HOH HOH . 
K 6 HOH B 125 625 88 HOH HOH . 
K 6 HOH B 126 626 158 HOH HOH . 
K 6 HOH B 127 627 114 HOH HOH . 
K 6 HOH B 128 628 53 HOH HOH . 
K 6 HOH B 129 629 166 HOH HOH . 
K 6 HOH B 130 630 150 HOH HOH . 
K 6 HOH B 131 631 169 HOH HOH . 
K 6 HOH B 132 632 118 HOH HOH . 
K 6 HOH B 133 633 76 HOH HOH . 
K 6 HOH B 134 634 139 HOH HOH . 
K 6 HOH B 135 635 112 HOH HOH . 
K 6 HOH B 136 636 124 HOH HOH . 
K 6 HOH B 137 637 171 HOH HOH . 
K 6 HOH B 138 638 164 HOH HOH . 
K 6 HOH B 139 639 168 HOH HOH . 
K 6 HOH B 140 640 165 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 NAG . . . D 4 34.727 -7.062 29.337 1 54.57 ? C1 NAG 401 B 1 
HETATM 2 C C2 NAG . . . D 4 34.585 -8.363 30.118 1 60.77 ? C2 NAG 401 B 1 
HETATM 3 C C3 NAG . . . D 4 34.356 -8.088 31.598 1 61.66 ? C3 NAG 401 B 1 
HETATM 4 C C4 NAG . . . D 4 35.512 -7.285 32.176 1 62.78 ? C4 NAG 401 B 1 
HETATM 5 C C5 NAG . . . D 4 36.335 -6.63 31.07 1 62.39 ? C5 NAG 401 B 1 
HETATM 6 C C6 NAG . . . D 4 37.32 -7.615 30.447 1 63.95 ? C6 NAG 401 B 1 
HETATM 7 C C7 NAG . . . D 4 33.683 -10.063 28.64 1 63.8 ? C7 NAG 401 B 1 
HETATM 8 C C8 NAG . . . D 4 32.443 -10.585 27.977 1 63.1 ? C8 NAG 401 B 1 
HETATM 9 N N2 NAG . . . D 4 33.488 -9.146 29.584 1 62.35 ? N2 NAG 401 B 1 
HETATM 10 O O3 NAG . . . D 4 34.235 -9.33 32.302 1 62.62 ? O3 NAG 401 B 1 
HETATM 11 O O4 NAG . . . D 4 34.998 -6.273 33.051 1 63.85 ? O4 NAG 401 B 1 
HETATM 12 O O5 NAG . . . D 4 35.473 -6.086 30.068 1 58.95 ? O5 NAG 401 B 1 
HETATM 13 O O6 NAG . . . D 4 38.526 -6.925 30.098 1 65.67 ? O6 NAG 401 B 1 
HETATM 14 O O7 NAG . . . D 4 34.797 -10.454 28.332 1 63.08 ? O7 NAG 401 B 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           284 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           14 
#