data_7ST5
#
_model_server_result.job_id            qrk0JyJa8UtU_gzpij4G-w 
_model_server_result.datetime_utc      '2025-02-28 22:01:54' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7st5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":301}' 
#
_entry.id    7ST5 
#
_exptl.entry_id    7ST5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              62.068 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            1,2-ETHANEDIOL 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         77.18 
_cell.angle_beta          85.92 
_cell.angle_gamma         85.74 
_cell.entry_id            7ST5 
_cell.length_a            42.957 
_cell.length_b            97.704 
_cell.length_c            103.385 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7ST5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA trimeric 3 author_and_software_defined_assembly 1 
PISA trimeric 3 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,F,G,H,M,N,O,S 1 1 
C,D,E,I,J,K,L,P,Q,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 I N N 
? 4 J N N 
? 4 K N N 
? 4 L N N 
? 4 M N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 22 H CYS 22 1_555 A SG CYS 96 H CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf2 A SG CYS 147 H CYS 147 1_555 A SG CYS 203 H CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.059 ? 
disulf ? disulf3 B SG CYS 23 L CYS 23 1_555 B SG CYS 88 L CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.193 ? 
disulf ? disulf4 B SG CYS 134 L CYS 134 1_555 B SG CYS 194 L CYS 194 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.087 ? 
disulf ? disulf5 C SG CYS 25 F CYS 25 1_555 C SG CYS 91 F CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.04 ? 
disulf ? disulf6 D SG CYS 22 h CYS 22 1_555 D SG CYS 96 h CYS 96 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.083 ? 
disulf ? disulf7 D SG CYS 147 h CYS 147 1_555 D SG CYS 203 h CYS 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
disulf ? disulf8 E SG CYS 23 l CYS 23 1_555 E SG CYS 88 l CYS 88 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.197 ? 
disulf ? disulf9 F SG CYS 25 A CYS 25 1_555 F SG CYS 91 A CYS 91 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.052 ? 
#
_chem_comp.formula           'C2 H6 O2' 
_chem_comp.formula_weight    62.068 
_chem_comp.id                EDO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              1,2-ETHANEDIOL 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     'ETHYLENE GLYCOL' 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C1 O1 EDO sing 83 n n 
C1 C2 EDO sing 84 n n 
C1 H11 EDO sing 85 n n 
C1 H12 EDO sing 86 n n 
O1 HO1 EDO sing 87 n n 
C2 O2 EDO sing 88 n n 
C2 H21 EDO sing 89 n n 
C2 H22 EDO sing 90 n n 
O2 HO2 EDO sing 91 n n 
#
_atom_sites.entry_id                     7ST5 
_atom_sites.fract_transf_matrix[1][1]    0.023279 
_atom_sites.fract_transf_matrix[1][2]    -0.001734 
_atom_sites.fract_transf_matrix[1][3]    -0.001314 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.010263 
_atom_sites.fract_transf_matrix[2][3]    -0.002289 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009935 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 4 EDO H 1 301 5 EDO EDO . 
H 5 GOL L 1 301 1 GOL GOL . 
I 4 EDO F 1 201 1 EDO EDO . 
J 4 EDO l 1 301 2 EDO EDO . 
K 4 EDO l 1 302 3 EDO EDO . 
L 4 EDO l 1 303 4 EDO EDO . 
M 4 EDO A 1 201 6 EDO EDO . 
N 6 HOH H 1 401 535 HOH HOH . 
N 6 HOH H 2 402 114 HOH HOH . 
N 6 HOH H 3 403 64 HOH HOH . 
N 6 HOH H 4 404 204 HOH HOH . 
N 6 HOH H 5 405 241 HOH HOH . 
N 6 HOH H 6 406 29 HOH HOH . 
N 6 HOH H 7 407 57 HOH HOH . 
N 6 HOH H 8 408 152 HOH HOH . 
N 6 HOH H 9 409 130 HOH HOH . 
N 6 HOH H 10 410 269 HOH HOH . 
N 6 HOH H 11 411 34 HOH HOH . 
N 6 HOH H 12 412 43 HOH HOH . 
N 6 HOH H 13 413 559 HOH HOH . 
N 6 HOH H 14 414 526 HOH HOH . 
N 6 HOH H 15 415 549 HOH HOH . 
N 6 HOH H 16 416 527 HOH HOH . 
N 6 HOH H 17 417 523 HOH HOH . 
N 6 HOH H 18 418 119 HOH HOH . 
N 6 HOH H 19 419 5 HOH HOH . 
N 6 HOH H 20 420 139 HOH HOH . 
N 6 HOH H 21 421 521 HOH HOH . 
N 6 HOH H 22 422 147 HOH HOH . 
N 6 HOH H 23 423 2 HOH HOH . 
N 6 HOH H 24 424 11 HOH HOH . 
N 6 HOH H 25 425 507 HOH HOH . 
N 6 HOH H 26 426 16 HOH HOH . 
N 6 HOH H 27 427 545 HOH HOH . 
N 6 HOH H 28 428 6 HOH HOH . 
N 6 HOH H 29 429 569 HOH HOH . 
N 6 HOH H 30 430 568 HOH HOH . 
N 6 HOH H 31 431 69 HOH HOH . 
N 6 HOH H 32 432 525 HOH HOH . 
N 6 HOH H 33 433 12 HOH HOH . 
N 6 HOH H 34 434 21 HOH HOH . 
N 6 HOH H 35 435 37 HOH HOH . 
N 6 HOH H 36 436 98 HOH HOH . 
N 6 HOH H 37 437 15 HOH HOH . 
N 6 HOH H 38 438 74 HOH HOH . 
N 6 HOH H 39 439 570 HOH HOH . 
N 6 HOH H 40 440 560 HOH HOH . 
N 6 HOH H 41 441 91 HOH HOH . 
N 6 HOH H 42 442 196 HOH HOH . 
N 6 HOH H 43 443 503 HOH HOH . 
N 6 HOH H 44 444 573 HOH HOH . 
O 6 HOH L 1 401 550 HOH HOH . 
O 6 HOH L 2 402 555 HOH HOH . 
O 6 HOH L 3 403 191 HOH HOH . 
O 6 HOH L 4 404 531 HOH HOH . 
O 6 HOH L 5 405 218 HOH HOH . 
O 6 HOH L 6 406 111 HOH HOH . 
O 6 HOH L 7 407 70 HOH HOH . 
O 6 HOH L 8 408 564 HOH HOH . 
O 6 HOH L 9 409 556 HOH HOH . 
O 6 HOH L 10 410 530 HOH HOH . 
O 6 HOH L 11 411 522 HOH HOH . 
O 6 HOH L 12 412 134 HOH HOH . 
O 6 HOH L 13 413 76 HOH HOH . 
O 6 HOH L 14 414 160 HOH HOH . 
O 6 HOH L 15 415 529 HOH HOH . 
O 6 HOH L 16 416 24 HOH HOH . 
O 6 HOH L 17 417 194 HOH HOH . 
O 6 HOH L 18 418 562 HOH HOH . 
O 6 HOH L 19 419 17 HOH HOH . 
O 6 HOH L 20 420 508 HOH HOH . 
O 6 HOH L 21 421 146 HOH HOH . 
O 6 HOH L 22 422 141 HOH HOH . 
O 6 HOH L 23 423 58 HOH HOH . 
O 6 HOH L 24 424 124 HOH HOH . 
O 6 HOH L 25 425 193 HOH HOH . 
O 6 HOH L 26 426 104 HOH HOH . 
O 6 HOH L 27 427 561 HOH HOH . 
O 6 HOH L 28 428 95 HOH HOH . 
O 6 HOH L 29 429 575 HOH HOH . 
P 6 HOH F 1 301 519 HOH HOH . 
P 6 HOH F 2 302 510 HOH HOH . 
P 6 HOH F 3 303 539 HOH HOH . 
P 6 HOH F 4 304 540 HOH HOH . 
P 6 HOH F 5 305 547 HOH HOH . 
P 6 HOH F 6 306 28 HOH HOH . 
P 6 HOH F 7 307 541 HOH HOH . 
P 6 HOH F 8 308 185 HOH HOH . 
P 6 HOH F 9 309 127 HOH HOH . 
P 6 HOH F 10 310 97 HOH HOH . 
P 6 HOH F 11 311 548 HOH HOH . 
P 6 HOH F 12 312 39 HOH HOH . 
P 6 HOH F 13 313 520 HOH HOH . 
P 6 HOH F 14 314 571 HOH HOH . 
P 6 HOH F 15 315 544 HOH HOH . 
P 6 HOH F 16 316 542 HOH HOH . 
P 6 HOH F 17 317 532 HOH HOH . 
P 6 HOH F 18 318 533 HOH HOH . 
Q 6 HOH h 1 301 3 HOH HOH . 
Q 6 HOH h 2 302 517 HOH HOH . 
Q 6 HOH h 3 303 45 HOH HOH . 
Q 6 HOH h 4 304 515 HOH HOH . 
Q 6 HOH h 5 305 546 HOH HOH . 
Q 6 HOH h 6 306 509 HOH HOH . 
Q 6 HOH h 7 307 140 HOH HOH . 
Q 6 HOH h 8 308 136 HOH HOH . 
Q 6 HOH h 9 309 19 HOH HOH . 
Q 6 HOH h 10 310 552 HOH HOH . 
Q 6 HOH h 11 311 125 HOH HOH . 
Q 6 HOH h 12 312 14 HOH HOH . 
Q 6 HOH h 13 313 109 HOH HOH . 
Q 6 HOH h 14 314 175 HOH HOH . 
Q 6 HOH h 15 315 9 HOH HOH . 
Q 6 HOH h 16 316 71 HOH HOH . 
Q 6 HOH h 17 317 516 HOH HOH . 
Q 6 HOH h 18 318 1 HOH HOH . 
Q 6 HOH h 19 319 10 HOH HOH . 
Q 6 HOH h 20 320 232 HOH HOH . 
Q 6 HOH h 21 321 551 HOH HOH . 
Q 6 HOH h 22 322 567 HOH HOH . 
Q 6 HOH h 23 323 270 HOH HOH . 
Q 6 HOH h 24 324 7 HOH HOH . 
Q 6 HOH h 25 325 49 HOH HOH . 
Q 6 HOH h 26 326 101 HOH HOH . 
Q 6 HOH h 27 327 176 HOH HOH . 
Q 6 HOH h 28 328 228 HOH HOH . 
Q 6 HOH h 29 329 553 HOH HOH . 
Q 6 HOH h 30 330 63 HOH HOH . 
Q 6 HOH h 31 331 572 HOH HOH . 
Q 6 HOH h 32 332 79 HOH HOH . 
Q 6 HOH h 33 333 565 HOH HOH . 
Q 6 HOH h 34 334 484 HOH HOH . 
R 6 HOH l 1 401 574 HOH HOH . 
R 6 HOH l 2 402 554 HOH HOH . 
R 6 HOH l 3 403 128 HOH HOH . 
R 6 HOH l 4 404 102 HOH HOH . 
R 6 HOH l 5 405 511 HOH HOH . 
R 6 HOH l 6 406 92 HOH HOH . 
R 6 HOH l 7 407 4 HOH HOH . 
R 6 HOH l 8 408 512 HOH HOH . 
R 6 HOH l 9 409 81 HOH HOH . 
R 6 HOH l 10 410 566 HOH HOH . 
R 6 HOH l 11 411 30 HOH HOH . 
R 6 HOH l 12 412 131 HOH HOH . 
R 6 HOH l 13 413 106 HOH HOH . 
R 6 HOH l 14 414 75 HOH HOH . 
R 6 HOH l 15 415 47 HOH HOH . 
R 6 HOH l 16 416 513 HOH HOH . 
R 6 HOH l 17 417 8 HOH HOH . 
R 6 HOH l 18 418 32 HOH HOH . 
R 6 HOH l 19 419 118 HOH HOH . 
R 6 HOH l 20 420 22 HOH HOH . 
R 6 HOH l 21 421 27 HOH HOH . 
R 6 HOH l 22 422 89 HOH HOH . 
R 6 HOH l 23 423 226 HOH HOH . 
R 6 HOH l 24 424 289 HOH HOH . 
R 6 HOH l 25 425 205 HOH HOH . 
R 6 HOH l 26 426 487 HOH HOH . 
S 6 HOH A 1 301 538 HOH HOH . 
S 6 HOH A 2 302 80 HOH HOH . 
S 6 HOH A 3 303 528 HOH HOH . 
S 6 HOH A 4 304 536 HOH HOH . 
S 6 HOH A 5 305 557 HOH HOH . 
S 6 HOH A 6 306 524 HOH HOH . 
S 6 HOH A 7 307 66 HOH HOH . 
S 6 HOH A 8 308 534 HOH HOH . 
S 6 HOH A 9 309 105 HOH HOH . 
S 6 HOH A 10 310 31 HOH HOH . 
S 6 HOH A 11 311 563 HOH HOH . 
S 6 HOH A 12 312 558 HOH HOH . 
S 6 HOH A 13 313 486 HOH HOH . 
S 6 HOH A 14 314 215 HOH HOH . 
S 6 HOH A 15 315 537 HOH HOH . 
S 6 HOH A 16 316 506 HOH HOH . 
S 6 HOH A 17 317 490 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C1 EDO . . . J 4 -7.999 -22.836 -27.716 1 47.54 ? C1 EDO 301 l 1 
HETATM 2 O O1 EDO . . . J 4 -8.464 -23.368 -26.46 1 39.69 ? O1 EDO 301 l 1 
HETATM 3 C C2 EDO . . . J 4 -9.158 -22.832 -28.738 1 52.63 ? C2 EDO 301 l 1 
HETATM 4 O O2 EDO . . . J 4 -8.855 -22.043 -29.921 1 52.54 ? O2 EDO 301 l 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           28 
_model_server_stats.create_model_time_ms    16 
_model_server_stats.query_time_ms           312 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           4 
#