data_7STL # _model_server_result.job_id 8aOxfgR3xv5IGSv13QaduQ _model_server_result.datetime_utc '2025-07-03 12:10:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7stl # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1204}' # _entry.id 7STL # _exptl.entry_id 7STL _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 748.065 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-Distearoyl-sn-glycerophosphoethanolamine _entity.pdbx_number_of_molecules 8 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7STL _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7STL _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 E N N ? 2 F N N ? 2 G N N ? 2 H N N ? 2 I N N ? 2 J N N # _chem_comp.formula 'C41 H82 N O8 P' _chem_comp.formula_weight 748.065 _chem_comp.id 3PE _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-Distearoyl-sn-glycerophosphoethanolamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 3-SN-PHOSPHATIDYLETHANOLAMINE;1,2-DIACYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P O11 3PE sing 1 n n P O12 3PE sing 2 n n P O13 3PE sing 3 n n P O14 3PE doub 4 n n N C12 3PE sing 5 n n N HN1 3PE sing 6 n n N HN2 3PE sing 7 n n O11 C1 3PE sing 8 n n O13 C11 3PE sing 9 n n C11 C12 3PE sing 10 n n C11 H111 3PE sing 11 n n C11 H112 3PE sing 12 n n C12 H121 3PE sing 13 n n C12 H122 3PE sing 14 n n C1 C2 3PE sing 15 n n C1 H11 3PE sing 16 n n C1 H12 3PE sing 17 n n C2 C3 3PE sing 18 n n C2 O21 3PE sing 19 n n C2 H2 3PE sing 20 n n C3 O31 3PE sing 21 n n C3 H31 3PE sing 22 n n C3 H32 3PE sing 23 n n O31 C31 3PE sing 24 n n O32 C31 3PE doub 25 n n C31 C32 3PE sing 26 n n C32 C33 3PE sing 27 n n C32 H321 3PE sing 28 n n C32 H322 3PE sing 29 n n C33 C34 3PE sing 30 n n C33 H331 3PE sing 31 n n C33 H332 3PE sing 32 n n C34 C35 3PE sing 33 n n C34 H341 3PE sing 34 n n C34 H342 3PE sing 35 n n C35 C36 3PE sing 36 n n C35 H351 3PE sing 37 n n C35 H352 3PE sing 38 n n C36 C37 3PE sing 39 n n C36 H361 3PE sing 40 n n C36 H362 3PE sing 41 n n C37 C38 3PE sing 42 n n C37 H371 3PE sing 43 n n C37 H372 3PE sing 44 n n C38 C39 3PE sing 45 n n C38 H381 3PE sing 46 n n C38 H382 3PE sing 47 n n C39 C3A 3PE sing 48 n n C39 H391 3PE sing 49 n n C39 H392 3PE sing 50 n n C3A C3B 3PE sing 51 n n C3A H3A1 3PE sing 52 n n C3A H3A2 3PE sing 53 n n C3B C3C 3PE sing 54 n n C3B H3B1 3PE sing 55 n n C3B H3B2 3PE sing 56 n n C3C C3D 3PE sing 57 n n C3C H3C1 3PE sing 58 n n C3C H3C2 3PE sing 59 n n C3D C3E 3PE sing 60 n n C3D H3D1 3PE sing 61 n n C3D H3D2 3PE sing 62 n n C3E C3F 3PE sing 63 n n C3E H3E1 3PE sing 64 n n C3E H3E2 3PE sing 65 n n C3F C3G 3PE sing 66 n n C3F H3F1 3PE sing 67 n n C3F H3F2 3PE sing 68 n n C3G C3H 3PE sing 69 n n C3G H3G1 3PE sing 70 n n C3G H3G2 3PE sing 71 n n C3H C3I 3PE sing 72 n n C3H H3H1 3PE sing 73 n n C3H H3H2 3PE sing 74 n n C3I H3I1 3PE sing 75 n n C3I H3I2 3PE sing 76 n n C3I H3I3 3PE sing 77 n n O21 C21 3PE sing 78 n n O22 C21 3PE doub 79 n n C21 C22 3PE sing 80 n n C22 C23 3PE sing 81 n n C22 H221 3PE sing 82 n n C22 H222 3PE sing 83 n n C23 C24 3PE sing 84 n n C23 H231 3PE sing 85 n n C23 H232 3PE sing 86 n n C24 C25 3PE sing 87 n n C24 H241 3PE sing 88 n n C24 H242 3PE sing 89 n n C25 C26 3PE sing 90 n n C25 H251 3PE sing 91 n n C25 H252 3PE sing 92 n n C26 C27 3PE sing 93 n n C26 H261 3PE sing 94 n n C26 H262 3PE sing 95 n n C27 C28 3PE sing 96 n n C27 H271 3PE sing 97 n n C27 H272 3PE sing 98 n n C28 C29 3PE sing 99 n n C28 H281 3PE sing 100 n n C28 H282 3PE sing 101 n n C29 C2A 3PE sing 102 n n C29 H291 3PE sing 103 n n C29 H292 3PE sing 104 n n C2A C2B 3PE sing 105 n n C2A H2A1 3PE sing 106 n n C2A H2A2 3PE sing 107 n n C2B C2C 3PE sing 108 n n C2B H2B1 3PE sing 109 n n C2B H2B2 3PE sing 110 n n C2C C2D 3PE sing 111 n n C2C H2C1 3PE sing 112 n n C2C H2C2 3PE sing 113 n n C2D C2E 3PE sing 114 n n C2D H2D1 3PE sing 115 n n C2D H2D2 3PE sing 116 n n C2E C2F 3PE sing 117 n n C2E H2E1 3PE sing 118 n n C2E H2E2 3PE sing 119 n n C2F C2G 3PE sing 120 n n C2F H2F1 3PE sing 121 n n C2F H2F2 3PE sing 122 n n C2G C2H 3PE sing 123 n n C2G H2G1 3PE sing 124 n n C2G H2G2 3PE sing 125 n n C2H C2I 3PE sing 126 n n C2H H2H1 3PE sing 127 n n C2H H2H2 3PE sing 128 n n C2I H2I1 3PE sing 129 n n C2I H2I2 3PE sing 130 n n C2I H2I3 3PE sing 131 n n O12 H1 3PE sing 132 n n # _atom_sites.entry_id 7STL _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 3PE A 1 1201 1201 3PE PEH . D 2 3PE A 1 1202 1301 3PE PEH . E 2 3PE A 1 1203 1401 3PE PEH . F 2 3PE A 1 1204 1501 3PE PEH . G 2 3PE B 1 1201 1201 3PE PEH . H 2 3PE B 1 1202 1301 3PE PEH . I 2 3PE B 1 1203 1401 3PE PEH . J 2 3PE B 1 1204 1501 3PE PEH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P 3PE . . . F 2 115.057 135.481 106.326 1 20 ? P 3PE 1204 A 1 HETATM 2 N N 3PE . . . F 2 115.668 132.063 103.464 1 20 ? N 3PE 1204 A 1 HETATM 3 O O11 3PE . . . F 2 115.344 135.105 107.904 1 20 ? O11 3PE 1204 A 1 HETATM 4 O O12 3PE . . . F 2 113.787 136.286 106.222 1 20 ? O12 3PE 1204 A 1 HETATM 5 O O13 3PE . . . F 2 114.885 134.085 105.471 1 20 ? O13 3PE 1204 A 1 HETATM 6 O O14 3PE . . . F 2 116.217 136.273 105.769 1 20 ? O14 3PE 1204 A 1 HETATM 7 C C11 3PE . . . F 2 114.625 134.159 104.1 1 20 ? C11 3PE 1204 A 1 HETATM 8 C C12 3PE . . . F 2 114.385 132.739 103.59 1 20 ? C12 3PE 1204 A 1 HETATM 9 C C1 3PE . . . F 2 115.685 136.111 108.813 1 20 ? C1 3PE 1204 A 1 HETATM 10 C C2 3PE . . . F 2 115.833 135.458 110.191 1 20 ? C2 3PE 1204 A 1 HETATM 11 C C3 3PE . . . F 2 116.203 136.501 111.249 1 20 ? C3 3PE 1204 A 1 HETATM 12 O O31 3PE . . . F 2 117.484 136.189 111.722 1 20 ? O31 3PE 1204 A 1 HETATM 13 O O32 3PE . . . F 2 117.69 137.955 113.078 1 20 ? O32 3PE 1204 A 1 HETATM 14 C C31 3PE . . . F 2 117.829 136.787 112.939 1 20 ? C31 3PE 1204 A 1 HETATM 15 C C32 3PE . . . F 2 118.388 135.946 114.089 1 20 ? C32 3PE 1204 A 1 HETATM 16 C C33 3PE . . . F 2 117.331 134.972 114.606 1 20 ? C33 3PE 1204 A 1 HETATM 17 C C34 3PE . . . F 2 117.815 134.305 115.894 1 20 ? C34 3PE 1204 A 1 HETATM 18 C C35 3PE . . . F 2 116.72 133.373 116.413 1 20 ? C35 3PE 1204 A 1 HETATM 19 C C36 3PE . . . F 2 117.08 132.791 117.782 1 20 ? C36 3PE 1204 A 1 HETATM 20 C C37 3PE . . . F 2 118.334 131.919 117.717 1 20 ? C37 3PE 1204 A 1 HETATM 21 C C38 3PE . . . F 2 118.528 131.23 119.069 1 20 ? C38 3PE 1204 A 1 HETATM 22 C C39 3PE . . . F 2 119.889 130.539 119.108 1 20 ? C39 3PE 1204 A 1 HETATM 23 O O21 3PE . . . F 2 114.665 134.761 110.539 1 20 ? O21 3PE 1204 A 1 HETATM 24 O O22 3PE . . . F 2 113.328 136.587 110.409 1 20 ? O22 3PE 1204 A 1 HETATM 25 C C21 3PE . . . F 2 113.487 135.48 110.797 1 20 ? C21 3PE 1204 A 1 HETATM 26 C C22 3PE . . . F 2 112.393 134.78 111.598 1 20 ? C22 3PE 1204 A 1 HETATM 27 C C23 3PE . . . F 2 112.279 135.48 112.949 1 20 ? C23 3PE 1204 A 1 HETATM 28 C C24 3PE . . . F 2 112.233 134.467 114.094 1 20 ? C24 3PE 1204 A 1 HETATM 29 C C25 3PE . . . F 2 111.127 133.419 113.919 1 20 ? C25 3PE 1204 A 1 HETATM 30 C C26 3PE . . . F 2 111.025 132.554 115.181 1 20 ? C26 3PE 1204 A 1 HETATM 31 C C27 3PE . . . F 2 112.269 131.678 115.338 1 20 ? C27 3PE 1204 A 1 HETATM 32 C C28 3PE . . . F 2 112.269 130.937 116.671 1 20 ? C28 3PE 1204 A 1 HETATM 33 C C29 3PE . . . F 2 113.542 130.095 116.733 1 20 ? C29 3PE 1204 A 1 HETATM 34 C C2A 3PE . . . F 2 113.919 129.778 118.178 1 20 ? C2A 3PE 1204 A 1 HETATM 35 C C2B 3PE . . . F 2 112.856 128.917 118.853 1 20 ? C2B 3PE 1204 A 1 HETATM 36 C C2C 3PE . . . F 2 113.429 128.357 120.154 1 20 ? C2C 3PE 1204 A 1 HETATM 37 C C2D 3PE . . . F 2 114.329 127.16 119.856 1 20 ? C2D 3PE 1204 A 1 HETATM 38 H HN1 3PE . . . F 2 116.243 132.292 104.254 1 20 ? HN1 3PE 1204 A 1 HETATM 39 H HN2 3PE . . . F 2 115.542 131.067 103.415 1 20 ? HN2 3PE 1204 A 1 HETATM 40 H H111 3PE . . . F 2 115.491 134.581 103.604 1 20 ? H111 3PE 1204 A 1 HETATM 41 H H112 3PE . . . F 2 113.761 134.785 103.902 1 20 ? H112 3PE 1204 A 1 HETATM 42 H H121 3PE . . . F 2 113.751 132.208 104.292 1 20 ? H121 3PE 1204 A 1 HETATM 43 H H122 3PE . . . F 2 113.908 132.779 102.617 1 20 ? H122 3PE 1204 A 1 HETATM 44 H H11 3PE . . . F 2 114.916 136.875 108.829 1 20 ? H11 3PE 1204 A 1 HETATM 45 H H12 3PE . . . F 2 116.631 136.556 108.523 1 20 ? H12 3PE 1204 A 1 HETATM 46 H H2 3PE . . . F 2 116.641 134.738 110.131 1 20 ? H2 3PE 1204 A 1 HETATM 47 H H31 3PE . . . F 2 115.5 136.479 112.074 1 20 ? H31 3PE 1204 A 1 HETATM 48 H H32 3PE . . . F 2 116.212 137.486 110.794 1 20 ? H32 3PE 1204 A 1 HETATM 49 H H321 3PE . . . F 2 118.684 136.608 114.897 1 20 ? H321 3PE 1204 A 1 HETATM 50 H H322 3PE . . . F 2 119.256 135.391 113.745 1 20 ? H322 3PE 1204 A 1 HETATM 51 H H331 3PE . . . F 2 117.129 134.214 113.858 1 20 ? H331 3PE 1204 A 1 HETATM 52 H H332 3PE . . . F 2 116.412 135.512 114.815 1 20 ? H332 3PE 1204 A 1 HETATM 53 H H341 3PE . . . F 2 118.02 135.07 116.636 1 20 ? H341 3PE 1204 A 1 HETATM 54 H H342 3PE . . . F 2 118.718 133.739 115.694 1 20 ? H342 3PE 1204 A 1 HETATM 55 H H351 3PE . . . F 2 116.565 132.566 115.705 1 20 ? H351 3PE 1204 A 1 HETATM 56 H H352 3PE . . . F 2 115.804 133.947 116.512 1 20 ? H352 3PE 1204 A 1 HETATM 57 H H361 3PE . . . F 2 116.25 132.182 118.125 1 20 ? H361 3PE 1204 A 1 HETATM 58 H H362 3PE . . . F 2 117.242 133.599 118.488 1 20 ? H362 3PE 1204 A 1 HETATM 59 H H371 3PE . . . F 2 119.205 132.524 117.492 1 20 ? H371 3PE 1204 A 1 HETATM 60 H H372 3PE . . . F 2 118.217 131.164 116.947 1 20 ? H372 3PE 1204 A 1 HETATM 61 H H381 3PE . . . F 2 117.743 130.497 119.219 1 20 ? H381 3PE 1204 A 1 HETATM 62 H H382 3PE . . . F 2 118.484 131.972 119.859 1 20 ? H382 3PE 1204 A 1 HETATM 63 H H221 3PE . . . F 2 112.675 133.742 111.729 1 20 ? H221 3PE 1204 A 1 HETATM 64 H H222 3PE . . . F 2 111.446 134.846 111.07 1 20 ? H222 3PE 1204 A 1 HETATM 65 H H231 3PE . . . F 2 111.384 136.092 112.968 1 20 ? H231 3PE 1204 A 1 HETATM 66 H H232 3PE . . . F 2 113.147 136.117 113.085 1 20 ? H232 3PE 1204 A 1 HETATM 67 H H241 3PE . . . F 2 112.084 134.991 115.033 1 20 ? H241 3PE 1204 A 1 HETATM 68 H H242 3PE . . . F 2 113.195 133.97 114.117 1 20 ? H242 3PE 1204 A 1 HETATM 69 H H251 3PE . . . F 2 111.347 132.774 113.076 1 20 ? H251 3PE 1204 A 1 HETATM 70 H H252 3PE . . . F 2 110.182 133.924 113.747 1 20 ? H252 3PE 1204 A 1 HETATM 71 H H261 3PE . . . F 2 110.145 131.922 115.119 1 20 ? H261 3PE 1204 A 1 HETATM 72 H H262 3PE . . . F 2 110.938 133.204 116.045 1 20 ? H262 3PE 1204 A 1 HETATM 73 H H271 3PE . . . F 2 113.165 132.284 115.301 1 20 ? H271 3PE 1204 A 1 HETATM 74 H H272 3PE . . . F 2 112.306 130.954 114.534 1 20 ? H272 3PE 1204 A 1 HETATM 75 H H281 3PE . . . F 2 111.399 130.291 116.732 1 20 ? H281 3PE 1204 A 1 HETATM 76 H H282 3PE . . . F 2 112.253 131.643 117.495 1 20 ? H282 3PE 1204 A 1 HETATM 77 H H291 3PE . . . F 2 114.361 130.624 116.256 1 20 ? H291 3PE 1204 A 1 HETATM 78 H H292 3PE . . . F 2 113.361 129.166 116.203 1 20 ? H292 3PE 1204 A 1 HETATM 79 H H2A1 3PE . . . F 2 114.037 130.705 118.731 1 20 ? H2A1 3PE 1204 A 1 HETATM 80 H H2A2 3PE . . . F 2 114.861 129.241 118.18 1 20 ? H2A2 3PE 1204 A 1 HETATM 81 H H2B1 3PE . . . F 2 112.611 128.092 118.195 1 20 ? H2B1 3PE 1204 A 1 HETATM 82 H H2B2 3PE . . . F 2 111.962 129.498 119.056 1 20 ? H2B2 3PE 1204 A 1 HETATM 83 H H2C1 3PE . . . F 2 112.619 128.048 120.804 1 20 ? H2C1 3PE 1204 A 1 HETATM 84 H H2C2 3PE . . . F 2 114.01 129.129 120.649 1 20 ? H2C2 3PE 1204 A 1 # _model_server_stats.io_time_ms 24 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 40 _model_server_stats.query_time_ms 356 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 84 #