data_7SU6 # _model_server_result.job_id '_hLcCvtj-1HMKcFPurZwzw' _model_server_result.datetime_utc '2024-11-15 16:19:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7su6 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":202}' # _entry.id 7SU6 # _exptl.entry_id 7SU6 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 118.174 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (4S)-2-METHYL-2,4-PENTANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SU6 _cell.length_a 71.426 _cell.length_b 79.248 _cell.length_c 96.549 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SU6 _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details octameric _pdbx_struct_assembly.oligomeric_count 8 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_565 x,-y+1,-z 1 0 0 0 -1 0 0 0 -1 0 79.248 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 H N N # _chem_comp.formula 'C6 H14 O2' _chem_comp.formula_weight 118.174 _chem_comp.id MPD _chem_comp.mon_nstd_flag . _chem_comp.name (4S)-2-METHYL-2,4-PENTANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 MPD sing 237 n n C1 H11 MPD sing 238 n n C1 H12 MPD sing 239 n n C1 H13 MPD sing 240 n n C2 O2 MPD sing 241 n n C2 CM MPD sing 242 n n C2 C3 MPD sing 243 n n O2 HO2 MPD sing 244 n n CM HM1 MPD sing 245 n n CM HM2 MPD sing 246 n n CM HM3 MPD sing 247 n n C3 C4 MPD sing 248 n n C3 H31 MPD sing 249 n n C3 H32 MPD sing 250 n n C4 O4 MPD sing 251 n n C4 C5 MPD sing 252 n n C4 H4 MPD sing 253 n n O4 HO4 MPD sing 254 n n C5 H51 MPD sing 255 n n C5 H52 MPD sing 256 n n C5 H53 MPD sing 257 n n # _atom_sites.entry_id 7SU6 _atom_sites.fract_transf_matrix[1][1] 0.014001 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012619 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010357 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 NPR A 1 201 200 NPR NPR . F 3 MPD A 1 202 300 MPD MPD . G 2 NPR B 1 201 200 NPR NPR . H 3 MPD B 1 202 300 MPD MPD . I 2 NPR C 1 200 200 NPR NPR . J 2 NPR D 1 200 200 NPR NPR . K 4 HOH A 1 301 2 HOH HOH . K 4 HOH A 2 302 198 HOH HOH . K 4 HOH A 3 303 113 HOH HOH . K 4 HOH A 4 304 71 HOH HOH . K 4 HOH A 5 305 138 HOH HOH . K 4 HOH A 6 306 87 HOH HOH . K 4 HOH A 7 307 174 HOH HOH . K 4 HOH A 8 308 14 HOH HOH . K 4 HOH A 9 309 35 HOH HOH . K 4 HOH A 10 310 60 HOH HOH . K 4 HOH A 11 311 45 HOH HOH . K 4 HOH A 12 312 23 HOH HOH . K 4 HOH A 13 313 59 HOH HOH . K 4 HOH A 14 314 79 HOH HOH . K 4 HOH A 15 315 29 HOH HOH . K 4 HOH A 16 316 83 HOH HOH . K 4 HOH A 17 317 54 HOH HOH . K 4 HOH A 18 318 165 HOH HOH . K 4 HOH A 19 319 216 HOH HOH . K 4 HOH A 20 320 44 HOH HOH . K 4 HOH A 21 321 86 HOH HOH . K 4 HOH A 22 322 132 HOH HOH . K 4 HOH A 23 323 120 HOH HOH . K 4 HOH A 24 324 105 HOH HOH . K 4 HOH A 25 325 11 HOH HOH . K 4 HOH A 26 326 102 HOH HOH . K 4 HOH A 27 327 1 HOH HOH . K 4 HOH A 28 328 116 HOH HOH . K 4 HOH A 29 329 293 HOH HOH . K 4 HOH A 30 330 95 HOH HOH . K 4 HOH A 31 331 295 HOH HOH . K 4 HOH A 32 332 123 HOH HOH . K 4 HOH A 33 333 214 HOH HOH . K 4 HOH A 34 334 254 HOH HOH . K 4 HOH A 35 335 156 HOH HOH . K 4 HOH A 36 336 157 HOH HOH . K 4 HOH A 37 337 136 HOH HOH . K 4 HOH A 38 338 121 HOH HOH . K 4 HOH A 39 339 84 HOH HOH . K 4 HOH A 40 340 188 HOH HOH . K 4 HOH A 41 341 152 HOH HOH . K 4 HOH A 42 342 170 HOH HOH . K 4 HOH A 43 343 42 HOH HOH . K 4 HOH A 44 344 305 HOH HOH . K 4 HOH A 45 345 119 HOH HOH . K 4 HOH A 46 346 181 HOH HOH . K 4 HOH A 47 347 163 HOH HOH . K 4 HOH A 48 348 139 HOH HOH . K 4 HOH A 49 349 281 HOH HOH . K 4 HOH A 50 350 225 HOH HOH . K 4 HOH A 51 351 235 HOH HOH . K 4 HOH A 52 352 237 HOH HOH . K 4 HOH A 53 353 77 HOH HOH . K 4 HOH A 54 354 264 HOH HOH . K 4 HOH A 55 355 150 HOH HOH . K 4 HOH A 56 356 107 HOH HOH . K 4 HOH A 57 357 180 HOH HOH . K 4 HOH A 58 358 218 HOH HOH . K 4 HOH A 59 359 110 HOH HOH . K 4 HOH A 60 360 278 HOH HOH . K 4 HOH A 61 361 137 HOH HOH . K 4 HOH A 62 362 28 HOH HOH . K 4 HOH A 63 363 277 HOH HOH . K 4 HOH A 64 364 204 HOH HOH . K 4 HOH A 65 365 162 HOH HOH . K 4 HOH A 66 366 191 HOH HOH . K 4 HOH A 67 367 233 HOH HOH . K 4 HOH A 68 368 221 HOH HOH . L 4 HOH B 1 301 301 HOH HOH . L 4 HOH B 2 302 27 HOH HOH . L 4 HOH B 3 303 25 HOH HOH . L 4 HOH B 4 304 10 HOH HOH . L 4 HOH B 5 305 210 HOH HOH . L 4 HOH B 6 306 104 HOH HOH . L 4 HOH B 7 307 285 HOH HOH . L 4 HOH B 8 308 22 HOH HOH . L 4 HOH B 9 309 7 HOH HOH . L 4 HOH B 10 310 242 HOH HOH . L 4 HOH B 11 311 6 HOH HOH . L 4 HOH B 12 312 98 HOH HOH . L 4 HOH B 13 313 40 HOH HOH . L 4 HOH B 14 314 229 HOH HOH . L 4 HOH B 15 315 239 HOH HOH . L 4 HOH B 16 316 112 HOH HOH . L 4 HOH B 17 317 3 HOH HOH . L 4 HOH B 18 318 183 HOH HOH . L 4 HOH B 19 319 12 HOH HOH . L 4 HOH B 20 320 26 HOH HOH . L 4 HOH B 21 321 203 HOH HOH . L 4 HOH B 22 322 92 HOH HOH . L 4 HOH B 23 323 106 HOH HOH . L 4 HOH B 24 324 31 HOH HOH . L 4 HOH B 25 325 73 HOH HOH . L 4 HOH B 26 326 90 HOH HOH . L 4 HOH B 27 327 117 HOH HOH . L 4 HOH B 28 328 51 HOH HOH . L 4 HOH B 29 329 24 HOH HOH . L 4 HOH B 30 330 94 HOH HOH . L 4 HOH B 31 331 38 HOH HOH . L 4 HOH B 32 332 227 HOH HOH . L 4 HOH B 33 333 212 HOH HOH . L 4 HOH B 34 334 145 HOH HOH . L 4 HOH B 35 335 270 HOH HOH . L 4 HOH B 36 336 36 HOH HOH . L 4 HOH B 37 337 135 HOH HOH . L 4 HOH B 38 338 209 HOH HOH . L 4 HOH B 39 339 205 HOH HOH . L 4 HOH B 40 340 240 HOH HOH . L 4 HOH B 41 341 148 HOH HOH . L 4 HOH B 42 342 160 HOH HOH . L 4 HOH B 43 343 280 HOH HOH . L 4 HOH B 44 344 97 HOH HOH . L 4 HOH B 45 345 122 HOH HOH . L 4 HOH B 46 346 43 HOH HOH . L 4 HOH B 47 347 299 HOH HOH . L 4 HOH B 48 348 166 HOH HOH . L 4 HOH B 49 349 89 HOH HOH . L 4 HOH B 50 350 149 HOH HOH . L 4 HOH B 51 351 17 HOH HOH . L 4 HOH B 52 352 289 HOH HOH . L 4 HOH B 53 353 173 HOH HOH . L 4 HOH B 54 354 189 HOH HOH . L 4 HOH B 55 355 297 HOH HOH . L 4 HOH B 56 356 159 HOH HOH . L 4 HOH B 57 357 58 HOH HOH . L 4 HOH B 58 358 304 HOH HOH . L 4 HOH B 59 359 140 HOH HOH . L 4 HOH B 60 360 303 HOH HOH . L 4 HOH B 61 361 211 HOH HOH . L 4 HOH B 62 362 284 HOH HOH . L 4 HOH B 63 363 250 HOH HOH . L 4 HOH B 64 364 129 HOH HOH . L 4 HOH B 65 365 96 HOH HOH . L 4 HOH B 66 366 238 HOH HOH . L 4 HOH B 67 367 167 HOH HOH . L 4 HOH B 68 368 298 HOH HOH . L 4 HOH B 69 369 222 HOH HOH . L 4 HOH B 70 370 93 HOH HOH . L 4 HOH B 71 371 215 HOH HOH . L 4 HOH B 72 372 258 HOH HOH . L 4 HOH B 73 373 143 HOH HOH . L 4 HOH B 74 374 190 HOH HOH . L 4 HOH B 75 375 274 HOH HOH . L 4 HOH B 76 376 228 HOH HOH . L 4 HOH B 77 377 300 HOH HOH . L 4 HOH B 78 378 109 HOH HOH . L 4 HOH B 79 379 187 HOH HOH . L 4 HOH B 80 380 286 HOH HOH . L 4 HOH B 81 381 287 HOH HOH . M 4 HOH C 1 301 192 HOH HOH . M 4 HOH C 2 302 46 HOH HOH . M 4 HOH C 3 303 37 HOH HOH . M 4 HOH C 4 304 130 HOH HOH . M 4 HOH C 5 305 200 HOH HOH . M 4 HOH C 6 306 9 HOH HOH . M 4 HOH C 7 307 193 HOH HOH . M 4 HOH C 8 308 111 HOH HOH . M 4 HOH C 9 309 61 HOH HOH . M 4 HOH C 10 310 85 HOH HOH . M 4 HOH C 11 311 147 HOH HOH . M 4 HOH C 12 312 196 HOH HOH . M 4 HOH C 13 313 13 HOH HOH . M 4 HOH C 14 314 257 HOH HOH . M 4 HOH C 15 315 15 HOH HOH . M 4 HOH C 16 316 256 HOH HOH . M 4 HOH C 17 317 82 HOH HOH . M 4 HOH C 18 318 39 HOH HOH . M 4 HOH C 19 319 99 HOH HOH . M 4 HOH C 20 320 80 HOH HOH . M 4 HOH C 21 321 251 HOH HOH . M 4 HOH C 22 322 153 HOH HOH . M 4 HOH C 23 323 232 HOH HOH . M 4 HOH C 24 324 78 HOH HOH . M 4 HOH C 25 325 128 HOH HOH . M 4 HOH C 26 326 220 HOH HOH . M 4 HOH C 27 327 155 HOH HOH . M 4 HOH C 28 328 115 HOH HOH . M 4 HOH C 29 329 245 HOH HOH . M 4 HOH C 30 330 100 HOH HOH . M 4 HOH C 31 331 57 HOH HOH . M 4 HOH C 32 332 182 HOH HOH . M 4 HOH C 33 333 247 HOH HOH . M 4 HOH C 34 334 41 HOH HOH . M 4 HOH C 35 335 208 HOH HOH . M 4 HOH C 36 336 65 HOH HOH . M 4 HOH C 37 337 67 HOH HOH . M 4 HOH C 38 338 283 HOH HOH . M 4 HOH C 39 339 64 HOH HOH . M 4 HOH C 40 340 47 HOH HOH . M 4 HOH C 41 341 63 HOH HOH . M 4 HOH C 42 342 108 HOH HOH . M 4 HOH C 43 343 290 HOH HOH . M 4 HOH C 44 344 291 HOH HOH . M 4 HOH C 45 345 195 HOH HOH . M 4 HOH C 46 346 175 HOH HOH . M 4 HOH C 47 347 177 HOH HOH . M 4 HOH C 48 348 224 HOH HOH . M 4 HOH C 49 349 133 HOH HOH . M 4 HOH C 50 350 52 HOH HOH . M 4 HOH C 51 351 223 HOH HOH . M 4 HOH C 52 352 226 HOH HOH . M 4 HOH C 53 353 197 HOH HOH . M 4 HOH C 54 354 244 HOH HOH . M 4 HOH C 55 355 127 HOH HOH . M 4 HOH C 56 356 125 HOH HOH . M 4 HOH C 57 357 171 HOH HOH . M 4 HOH C 58 358 253 HOH HOH . M 4 HOH C 59 359 252 HOH HOH . M 4 HOH C 60 360 255 HOH HOH . M 4 HOH C 61 361 248 HOH HOH . M 4 HOH C 62 362 246 HOH HOH . M 4 HOH C 63 363 243 HOH HOH . M 4 HOH C 64 364 70 HOH HOH . M 4 HOH C 65 365 292 HOH HOH . M 4 HOH C 66 366 249 HOH HOH . N 4 HOH D 1 301 62 HOH HOH . N 4 HOH D 2 302 288 HOH HOH . N 4 HOH D 3 303 101 HOH HOH . N 4 HOH D 4 304 18 HOH HOH . N 4 HOH D 5 305 261 HOH HOH . N 4 HOH D 6 306 16 HOH HOH . N 4 HOH D 7 307 206 HOH HOH . N 4 HOH D 8 308 134 HOH HOH . N 4 HOH D 9 309 50 HOH HOH . N 4 HOH D 10 310 49 HOH HOH . N 4 HOH D 11 311 273 HOH HOH . N 4 HOH D 12 312 72 HOH HOH . N 4 HOH D 13 313 21 HOH HOH . N 4 HOH D 14 314 88 HOH HOH . N 4 HOH D 15 315 20 HOH HOH . N 4 HOH D 16 316 141 HOH HOH . N 4 HOH D 17 317 154 HOH HOH . N 4 HOH D 18 318 30 HOH HOH . N 4 HOH D 19 319 4 HOH HOH . N 4 HOH D 20 320 131 HOH HOH . N 4 HOH D 21 321 74 HOH HOH . N 4 HOH D 22 322 33 HOH HOH . N 4 HOH D 23 323 81 HOH HOH . N 4 HOH D 24 324 5 HOH HOH . N 4 HOH D 25 325 91 HOH HOH . N 4 HOH D 26 326 146 HOH HOH . N 4 HOH D 27 327 268 HOH HOH . N 4 HOH D 28 328 34 HOH HOH . N 4 HOH D 29 329 53 HOH HOH . N 4 HOH D 30 330 267 HOH HOH . N 4 HOH D 31 331 114 HOH HOH . N 4 HOH D 32 332 234 HOH HOH . N 4 HOH D 33 333 8 HOH HOH . N 4 HOH D 34 334 201 HOH HOH . N 4 HOH D 35 335 184 HOH HOH . N 4 HOH D 36 336 76 HOH HOH . N 4 HOH D 37 337 32 HOH HOH . N 4 HOH D 38 338 103 HOH HOH . N 4 HOH D 39 339 271 HOH HOH . N 4 HOH D 40 340 19 HOH HOH . N 4 HOH D 41 341 263 HOH HOH . N 4 HOH D 42 342 118 HOH HOH . N 4 HOH D 43 343 66 HOH HOH . N 4 HOH D 44 344 126 HOH HOH . N 4 HOH D 45 345 172 HOH HOH . N 4 HOH D 46 346 48 HOH HOH . N 4 HOH D 47 347 178 HOH HOH . N 4 HOH D 48 348 68 HOH HOH . N 4 HOH D 49 349 75 HOH HOH . N 4 HOH D 50 350 168 HOH HOH . N 4 HOH D 51 351 124 HOH HOH . N 4 HOH D 52 352 265 HOH HOH . N 4 HOH D 53 353 275 HOH HOH . N 4 HOH D 54 354 272 HOH HOH . N 4 HOH D 55 355 296 HOH HOH . N 4 HOH D 56 356 231 HOH HOH . N 4 HOH D 57 357 294 HOH HOH . N 4 HOH D 58 358 276 HOH HOH . N 4 HOH D 59 359 202 HOH HOH . N 4 HOH D 60 360 179 HOH HOH . N 4 HOH D 61 361 207 HOH HOH . N 4 HOH D 62 362 194 HOH HOH . N 4 HOH D 63 363 236 HOH HOH . N 4 HOH D 64 364 259 HOH HOH . N 4 HOH D 65 365 260 HOH HOH . N 4 HOH D 66 366 169 HOH HOH . N 4 HOH D 67 367 213 HOH HOH . N 4 HOH D 68 368 230 HOH HOH . N 4 HOH D 69 369 262 HOH HOH . N 4 HOH D 70 370 266 HOH HOH . N 4 HOH D 71 371 158 HOH HOH . N 4 HOH D 72 372 151 HOH HOH . N 4 HOH D 73 373 69 HOH HOH . N 4 HOH D 74 374 161 HOH HOH . N 4 HOH D 75 375 282 HOH HOH . N 4 HOH D 76 376 279 HOH HOH . N 4 HOH D 77 377 164 HOH HOH . N 4 HOH D 78 378 219 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 MPD . . . H 3 -31.701 39.394 13.732 1 33.4 ? C1 MPD 202 B 1 HETATM 2 C C2 MPD . . . H 3 -31.541 40.892 13.511 1 38.7 ? C2 MPD 202 B 1 HETATM 3 O O2 MPD . . . H 3 -31.44 41.519 14.815 1 47.88 ? O2 MPD 202 B 1 HETATM 4 C CM MPD . . . H 3 -32.762 41.48 12.818 1 29.56 ? CM MPD 202 B 1 HETATM 5 C C3 MPD . . . H 3 -30.273 41.207 12.717 1 40.25 ? C3 MPD 202 B 1 HETATM 6 C C4 MPD . . . H 3 -29.948 40.241 11.574 1 37.88 ? C4 MPD 202 B 1 HETATM 7 O O4 MPD . . . H 3 -30.983 40.162 10.614 1 42.74 ? O4 MPD 202 B 1 HETATM 8 C C5 MPD . . . H 3 -28.664 40.677 10.874 1 40.4 ? C5 MPD 202 B 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 261 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 8 #