data_7SUX # _model_server_result.job_id srFauXu55RFt_qMF-5LaCw _model_server_result.datetime_utc '2024-11-12 23:00:29' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sux # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":802}' # _entry.id 7SUX # _exptl.entry_id 7SUX _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 743.405 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7SUX _cell.length_a 47.127 _cell.length_b 69.653 _cell.length_c 153.271 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SUX _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H28 N7 O17 P3' _chem_comp.formula_weight 743.405 _chem_comp.id NAP _chem_comp.mon_nstd_flag . _chem_comp.name 'NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms "2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE" # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag PA O1A NAP doub 328 n n PA O2A NAP sing 329 n n PA O5B NAP sing 330 n n PA O3 NAP sing 331 n n O2A HOA2 NAP sing 332 n n O5B C5B NAP sing 333 n n C5B C4B NAP sing 334 n n C5B H51A NAP sing 335 n n C5B H52A NAP sing 336 n n C4B O4B NAP sing 337 n n C4B C3B NAP sing 338 n n C4B H4B NAP sing 339 n n O4B C1B NAP sing 340 n n C3B O3B NAP sing 341 n n C3B C2B NAP sing 342 n n C3B H3B NAP sing 343 n n O3B HO3A NAP sing 344 n n C2B O2B NAP sing 345 n n C2B C1B NAP sing 346 n n C2B H2B NAP sing 347 n n O2B P2B NAP sing 348 n n C1B N9A NAP sing 349 n n C1B H1B NAP sing 350 n n N9A C8A NAP sing 351 n y N9A C4A NAP sing 352 n y C8A N7A NAP doub 353 n y C8A H8A NAP sing 354 n n N7A C5A NAP sing 355 n y C5A C6A NAP sing 356 n y C5A C4A NAP doub 357 n y C6A N6A NAP sing 358 n n C6A N1A NAP doub 359 n y N6A H61A NAP sing 360 n n N6A H62A NAP sing 361 n n N1A C2A NAP sing 362 n y C2A N3A NAP doub 363 n y C2A H2A NAP sing 364 n n N3A C4A NAP sing 365 n y O3 PN NAP sing 366 n n PN O1N NAP doub 367 n n PN O2N NAP sing 368 n n PN O5D NAP sing 369 n n O5D C5D NAP sing 370 n n C5D C4D NAP sing 371 n n C5D H51N NAP sing 372 n n C5D H52N NAP sing 373 n n C4D O4D NAP sing 374 n n C4D C3D NAP sing 375 n n C4D H4D NAP sing 376 n n O4D C1D NAP sing 377 n n C3D O3D NAP sing 378 n n C3D C2D NAP sing 379 n n C3D H3D NAP sing 380 n n O3D HO3N NAP sing 381 n n C2D O2D NAP sing 382 n n C2D C1D NAP sing 383 n n C2D H2D NAP sing 384 n n O2D HO2N NAP sing 385 n n C1D N1N NAP sing 386 n n C1D H1D NAP sing 387 n n N1N C2N NAP sing 388 n y N1N C6N NAP doub 389 n y C2N C3N NAP doub 390 n y C2N H2N NAP sing 391 n n C3N C7N NAP sing 392 n n C3N C4N NAP sing 393 n y C7N O7N NAP doub 394 n n C7N N7N NAP sing 395 n n N7N H71N NAP sing 396 n n N7N H72N NAP sing 397 n n C4N C5N NAP doub 398 n y C4N H4N NAP sing 399 n n C5N C6N NAP sing 400 n y C5N H5N NAP sing 401 n n C6N H6N NAP sing 402 n n P2B O1X NAP doub 403 n n P2B O2X NAP sing 404 n n P2B O3X NAP sing 405 n n O2X HOP2 NAP sing 406 n n O3X HOP3 NAP sing 407 n n # _atom_sites.entry_id 7SUX _atom_sites.fract_transf_matrix[1][1] 0.021219 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014357 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006524 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 FAD A 1 801 797 FAD FAD . C 3 NAP A 1 802 801 NAP NAP . D 4 HOH A 1 901 27 HOH HOH . D 4 HOH A 2 902 14 HOH HOH . D 4 HOH A 3 903 10 HOH HOH . D 4 HOH A 4 904 30 HOH HOH . D 4 HOH A 5 905 38 HOH HOH . D 4 HOH A 6 906 9 HOH HOH . D 4 HOH A 7 907 25 HOH HOH . D 4 HOH A 8 908 23 HOH HOH . D 4 HOH A 9 909 4 HOH HOH . D 4 HOH A 10 910 29 HOH HOH . D 4 HOH A 11 911 3 HOH HOH . D 4 HOH A 12 912 5 HOH HOH . D 4 HOH A 13 913 28 HOH HOH . D 4 HOH A 14 914 2 HOH HOH . D 4 HOH A 15 915 22 HOH HOH . D 4 HOH A 16 916 8 HOH HOH . D 4 HOH A 17 917 31 HOH HOH . D 4 HOH A 18 918 6 HOH HOH . D 4 HOH A 19 919 21 HOH HOH . D 4 HOH A 20 920 1 HOH HOH . D 4 HOH A 21 921 37 HOH HOH . D 4 HOH A 22 922 16 HOH HOH . D 4 HOH A 23 923 33 HOH HOH . D 4 HOH A 24 924 20 HOH HOH . D 4 HOH A 25 925 12 HOH HOH . D 4 HOH A 26 926 15 HOH HOH . D 4 HOH A 27 927 7 HOH HOH . D 4 HOH A 28 928 11 HOH HOH . D 4 HOH A 29 929 18 HOH HOH . D 4 HOH A 30 930 36 HOH HOH . D 4 HOH A 31 931 24 HOH HOH . D 4 HOH A 32 932 39 HOH HOH . D 4 HOH A 33 933 26 HOH HOH . D 4 HOH A 34 934 13 HOH HOH . D 4 HOH A 35 935 32 HOH HOH . D 4 HOH A 36 936 34 HOH HOH . D 4 HOH A 37 937 40 HOH HOH . D 4 HOH A 38 938 35 HOH HOH . D 4 HOH A 39 939 19 HOH HOH . D 4 HOH A 40 940 17 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PA NAP . . . C 3 46.19 137.134 37.704 1 75.17 ? PA NAP 802 A 1 HETATM 2 O O1A NAP . . . C 3 47.347 136.238 37.798 1 79.62 ? O1A NAP 802 A 1 HETATM 3 O O2A NAP . . . C 3 44.988 136.763 36.958 1 81.73 ? O2A NAP 802 A 1 HETATM 4 O O5B NAP . . . C 3 45.749 137.543 39.145 1 72.04 ? O5B NAP 802 A 1 HETATM 5 C C5B NAP . . . C 3 46.417 137.064 40.279 1 76.93 ? C5B NAP 802 A 1 HETATM 6 C C4B NAP . . . C 3 45.4 136.906 41.385 1 75.99 ? C4B NAP 802 A 1 HETATM 7 O O4B NAP . . . C 3 44.596 138.065 41.456 1 71.85 ? O4B NAP 802 A 1 HETATM 8 C C3B NAP . . . C 3 44.458 135.75 41.112 1 78.95 ? C3B NAP 802 A 1 HETATM 9 O O3B NAP . . . C 3 44.336 134.915 42.252 1 82.58 ? O3B NAP 802 A 1 HETATM 10 C C2B NAP . . . C 3 43.147 136.404 40.829 1 77.5 ? C2B NAP 802 A 1 HETATM 11 O O2B NAP . . . C 3 42.029 135.635 41.194 1 75.71 ? O2B NAP 802 A 1 HETATM 12 C C1B NAP . . . C 3 43.301 137.605 41.709 1 72.88 ? C1B NAP 802 A 1 HETATM 13 N N9A NAP . . . C 3 42.237 138.557 41.446 1 71.22 ? N9A NAP 802 A 1 HETATM 14 C C8A NAP . . . C 3 41.468 138.574 40.377 1 70.79 ? C8A NAP 802 A 1 HETATM 15 N N7A NAP . . . C 3 40.565 139.547 40.488 1 72.71 ? N7A NAP 802 A 1 HETATM 16 C C5A NAP . . . C 3 40.76 140.147 41.646 1 68.53 ? C5A NAP 802 A 1 HETATM 17 C C6A NAP . . . C 3 40.148 141.244 42.37 1 67.19 ? C6A NAP 802 A 1 HETATM 18 N N6A NAP . . . C 3 39.121 141.915 41.845 1 71.95 ? N6A NAP 802 A 1 HETATM 19 N N1A NAP . . . C 3 40.648 141.555 43.555 1 70.91 ? N1A NAP 802 A 1 HETATM 20 C C2A NAP . . . C 3 41.67 140.899 44.092 1 73.06 ? C2A NAP 802 A 1 HETATM 21 N N3A NAP . . . C 3 42.267 139.887 43.483 1 71.51 ? N3A NAP 802 A 1 HETATM 22 C C4A NAP . . . C 3 41.857 139.477 42.284 1 68.93 ? C4A NAP 802 A 1 HETATM 23 O O3 NAP . . . C 3 46.551 138.54 37.099 1 96.17 ? O3 NAP 802 A 1 HETATM 24 P PN NAP . . . C 3 47.991 138.988 36.649 1 93.76 ? PN NAP 802 A 1 HETATM 25 O O1N NAP . . . C 3 48.934 137.849 36.613 1 87.19 ? O1N NAP 802 A 1 HETATM 26 O O2N NAP . . . C 3 48.332 140.218 37.373 1 80.44 ? O2N NAP 802 A 1 HETATM 27 O O5D NAP . . . C 3 47.61 139.34 35.177 1 97.33 ? O5D NAP 802 A 1 HETATM 28 C C5D NAP . . . C 3 47.869 138.352 34.199 1 98.43 ? C5D NAP 802 A 1 HETATM 29 C C4D NAP . . . C 3 47.078 138.675 32.95 1 97.56 ? C4D NAP 802 A 1 HETATM 30 O O4D NAP . . . C 3 45.695 138.498 33.208 1 102.96 ? O4D NAP 802 A 1 HETATM 31 C C3D NAP . . . C 3 47.3 140.118 32.589 1 96.16 ? C3D NAP 802 A 1 HETATM 32 O O3D NAP . . . C 3 47.745 140.185 31.25 1 94.45 ? O3D NAP 802 A 1 HETATM 33 C C2D NAP . . . C 3 45.973 140.813 32.782 1 101.1 ? C2D NAP 802 A 1 HETATM 34 O O2D NAP . . . C 3 45.623 141.703 31.714 1 99.14 ? O2D NAP 802 A 1 HETATM 35 C C1D NAP . . . C 3 44.973 139.685 32.915 1 105.15 ? C1D NAP 802 A 1 HETATM 36 N N1N NAP . . . C 3 44.03 139.974 33.986 1 102.64 ? N1N NAP 802 A 1 HETATM 37 C C2N NAP . . . C 3 42.737 139.97 33.692 1 101.02 ? C2N NAP 802 A 1 HETATM 38 C C3N NAP . . . C 3 41.795 140.242 34.657 1 99.22 ? C3N NAP 802 A 1 HETATM 39 C C7N NAP . . . C 3 40.339 140.208 34.296 1 103.48 ? C7N NAP 802 A 1 HETATM 40 O O7N NAP . . . C 3 39.797 141.193 33.828 1 94.51 ? O7N NAP 802 A 1 HETATM 41 N N7N NAP . . . C 3 39.674 139.075 34.518 1 101.22 ? N7N NAP 802 A 1 HETATM 42 C C4N NAP . . . C 3 42.214 140.492 35.949 1 94.52 ? C4N NAP 802 A 1 HETATM 43 C C5N NAP . . . C 3 43.566 140.49 36.228 1 93.04 ? C5N NAP 802 A 1 HETATM 44 C C6N NAP . . . C 3 44.466 140.224 35.216 1 97.57 ? C6N NAP 802 A 1 HETATM 45 P P2B NAP . . . C 3 41.232 134.839 40.096 1 82.76 ? P2B NAP 802 A 1 HETATM 46 O O1X NAP . . . C 3 41.148 133.505 40.701 1 87 ? O1X NAP 802 A 1 HETATM 47 O O2X NAP . . . C 3 39.934 135.517 39.922 1 76.83 ? O2X NAP 802 A 1 HETATM 48 O O3X NAP . . . C 3 42.086 134.942 38.907 1 79.59 ? O3X NAP 802 A 1 HETATM 49 H H51A NAP . . . C 3 46.885 136.102 40.06 1 92.32 ? H51A NAP 802 A 1 HETATM 50 H H52A NAP . . . C 3 47.195 137.767 40.582 1 92.32 ? H52A NAP 802 A 1 HETATM 51 H H4B NAP . . . C 3 45.919 136.738 42.339 1 91.19 ? H4B NAP 802 A 1 HETATM 52 H H3B NAP . . . C 3 44.797 135.183 40.233 1 94.74 ? H3B NAP 802 A 1 HETATM 53 H HO3A NAP . . . C 3 45.184 134.488 42.431 1 99.1 ? HO3A NAP 802 A 1 HETATM 54 H H2B NAP . . . C 3 43.098 136.712 39.775 1 93 ? H2B NAP 802 A 1 HETATM 55 H H1B NAP . . . C 3 43.234 137.27 42.754 1 87.46 ? H1B NAP 802 A 1 HETATM 56 H H8A NAP . . . C 3 41.559 137.902 39.533 1 84.94 ? H8A NAP 802 A 1 HETATM 57 H H61A NAP . . . C 3 38.763 141.66 40.936 1 86.34 ? H61A NAP 802 A 1 HETATM 58 H H62A NAP . . . C 3 38.706 142.683 42.354 1 86.34 ? H62A NAP 802 A 1 HETATM 59 H H2A NAP . . . C 3 42.027 141.202 45.068 1 87.67 ? H2A NAP 802 A 1 HETATM 60 H H51N NAP . . . C 3 47.58 137.369 34.578 1 118.12 ? H51N NAP 802 A 1 HETATM 61 H H52N NAP . . . C 3 48.936 138.33 33.967 1 118.12 ? H52N NAP 802 A 1 HETATM 62 H H4D NAP . . . C 3 47.408 138.031 32.123 1 117.07 ? H4D NAP 802 A 1 HETATM 63 H H3D NAP . . . C 3 48.045 140.555 33.269 1 115.39 ? H3D NAP 802 A 1 HETATM 64 H HO3N NAP . . . C 3 47.897 141.108 31.006 1 113.34 ? HO3N NAP 802 A 1 HETATM 65 H H2D NAP . . . C 3 46.01 141.374 33.726 1 121.32 ? H2D NAP 802 A 1 HETATM 66 H HO2N NAP . . . C 3 46.284 142.405 31.648 1 118.97 ? HO2N NAP 802 A 1 HETATM 67 H H1D NAP . . . C 3 44.437 139.571 31.962 1 126.18 ? H1D NAP 802 A 1 HETATM 68 H H2N NAP . . . C 3 42.419 139.758 32.678 1 121.22 ? H2N NAP 802 A 1 HETATM 69 H H71N NAP . . . C 3 38.692 139.013 34.291 1 121.47 ? H71N NAP 802 A 1 HETATM 70 H H72N NAP . . . C 3 40.153 138.277 34.911 1 121.47 ? H72N NAP 802 A 1 HETATM 71 H H4N NAP . . . C 3 41.493 140.702 36.729 1 113.43 ? H4N NAP 802 A 1 HETATM 72 H H5N NAP . . . C 3 43.917 140.698 37.231 1 111.65 ? H5N NAP 802 A 1 HETATM 73 H H6N NAP . . . C 3 45.529 140.22 35.425 1 117.09 ? H6N NAP 802 A 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 73 #