data_7SV9 # _model_server_result.job_id RLMQBsPbHAkqEfqcfwu_8A _model_server_result.datetime_utc '2024-10-16 10:30:14' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7sv9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":201}' # _entry.id 7SV9 # _exptl.entry_id 7SV9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 339.389 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description TETRAPHENYLPHOSPHONIUM _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.45 _cell.angle_gamma 90 _cell.entry_id 7SV9 _cell.length_a 140.71 _cell.length_b 50.141 _cell.length_c 110.282 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7SV9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C24 H20 P 1' _chem_comp.formula_weight 339.389 _chem_comp.id P4P _chem_comp.mon_nstd_flag . _chem_comp.name TETRAPHENYLPHOSPHONIUM _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag P C1A P4P sing 235 n n P C1C P4P sing 236 n n P C1D P4P sing 237 n n P C1B P4P sing 238 n n C1A C2A P4P sing 239 n y C1A C6A P4P doub 240 n y C2A C3A P4P doub 241 n y C2A H2A P4P sing 242 n n C3A C4A P4P sing 243 n y C3A H3A P4P sing 244 n n C4A C5A P4P doub 245 n y C4A H4A P4P sing 246 n n C5A C6A P4P sing 247 n y C5A H5A P4P sing 248 n n C6A H6A P4P sing 249 n n C1C C6C P4P doub 250 n y C1C C2C P4P sing 251 n y C6C C5C P4P sing 252 n y C6C H6C P4P sing 253 n n C5C C4C P4P doub 254 n y C5C H5C P4P sing 255 n n C4C C3C P4P sing 256 n y C4C H4C P4P sing 257 n n C3C C2C P4P doub 258 n y C3C H3C P4P sing 259 n n C2C H2C P4P sing 260 n n C1D C6D P4P doub 261 n y C1D C2D P4P sing 262 n y C6D C5D P4P sing 263 n y C6D H6D P4P sing 264 n n C5D C4D P4P doub 265 n y C5D H5D P4P sing 266 n n C4D C3D P4P sing 267 n y C4D H4D P4P sing 268 n n C3D C2D P4P doub 269 n y C3D H3D P4P sing 270 n n C2D H2D P4P sing 271 n n C6B C5B P4P doub 272 n y C6B C1B P4P sing 273 n y C6B H6B P4P sing 274 n n C5B C4B P4P sing 275 n y C5B H5B P4P sing 276 n n C4B C3B P4P doub 277 n y C4B H4B P4P sing 278 n n C3B C2B P4P sing 279 n y C3B H3B P4P sing 280 n n C2B C1B P4P doub 281 n y C2B H2B P4P sing 282 n n # _atom_sites.entry_id 7SV9 _atom_sites.fract_transf_matrix[1][1] 0.007107 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000428 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.019944 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009084 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id P4P _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 201 _pdbx_nonpoly_scheme.auth_seq_num 202 _pdbx_nonpoly_scheme.pdb_mon_id P4P _pdbx_nonpoly_scheme.auth_mon_id LIG _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P P P4P . . . E 3 -11.231 25.939 20.454 1 71.6 ? P P4P 201 B 1 HETATM 2 C C1A P4P . . . E 3 -9.794 24.813 20.006 1 70.36 ? C1A P4P 201 B 1 HETATM 3 C C2A P4P . . . E 3 -9.673 23.51 20.479 1 69.6 ? C2A P4P 201 B 1 HETATM 4 C C3A P4P . . . E 3 -8.59 22.718 20.118 1 61.82 ? C3A P4P 201 B 1 HETATM 5 C C4A P4P . . . E 3 -7.606 23.219 19.283 1 64.63 ? C4A P4P 201 B 1 HETATM 6 C C5A P4P . . . E 3 -7.711 24.515 18.808 1 67.49 ? C5A P4P 201 B 1 HETATM 7 C C6A P4P . . . E 3 -8.797 25.301 19.171 1 64.82 ? C6A P4P 201 B 1 HETATM 8 C C1C P4P . . . E 3 -11.773 26.866 18.922 1 71.33 ? C1C P4P 201 B 1 HETATM 9 C C6C P4P . . . E 3 -12.06 28.225 18.944 1 67.72 ? C6C P4P 201 B 1 HETATM 10 C C5C P4P . . . E 3 -12.457 28.867 17.777 1 71.41 ? C5C P4P 201 B 1 HETATM 11 C C4C P4P . . . E 3 -12.567 28.161 16.589 1 75.07 ? C4C P4P 201 B 1 HETATM 12 C C3C P4P . . . E 3 -12.279 26.81 16.559 1 70.88 ? C3C P4P 201 B 1 HETATM 13 C C2C P4P . . . E 3 -11.891 26.181 17.728 1 71.98 ? C2C P4P 201 B 1 HETATM 14 C C1D P4P . . . E 3 -12.68 25.048 21.251 1 66.25 ? C1D P4P 201 B 1 HETATM 15 C C6D P4P . . . E 3 -12.627 23.706 21.616 1 65.05 ? C6D P4P 201 B 1 HETATM 16 C C5D P4P . . . E 3 -13.705 23.063 22.207 1 69.18 ? C5D P4P 201 B 1 HETATM 17 C C4D P4P . . . E 3 -14.874 23.758 22.459 1 71.96 ? C4D P4P 201 B 1 HETATM 18 C C3D P4P . . . E 3 -14.939 25.095 22.107 1 73.08 ? C3D P4P 201 B 1 HETATM 19 C C2D P4P . . . E 3 -13.857 25.734 21.51 1 74.08 ? C2D P4P 201 B 1 HETATM 20 C C6B P4P . . . E 3 -9.609 28.099 21.206 1 64.62 ? C6B P4P 201 B 1 HETATM 21 C C5B P4P . . . E 3 -9.127 29.082 22.049 1 66.9 ? C5B P4P 201 B 1 HETATM 22 C C4B P4P . . . E 3 -9.646 29.213 23.324 1 65.43 ? C4B P4P 201 B 1 HETATM 23 C C3B P4P . . . E 3 -10.65 28.36 23.754 1 67.11 ? C3B P4P 201 B 1 HETATM 24 C C2B P4P . . . E 3 -11.137 27.373 22.909 1 66.75 ? C2B P4P 201 B 1 HETATM 25 C C1B P4P . . . E 3 -10.611 27.242 21.632 1 66.37 ? C1B P4P 201 B 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 258 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 25 #