data_7SZT
#
_model_server_result.job_id            '_pmR7JC26OcGyy_QC8qWAA' 
_model_server_result.datetime_utc      '2024-11-25 23:25:49' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7szt 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"J","auth_seq_id":301}' 
#
_entry.id    7SZT 
#
_exptl.entry_id    7SZT 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              246.369 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'Dodecyldimethylphosphine oxide' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         93.56 
_cell.angle_beta          89.71 
_cell.angle_gamma         109.92 
_cell.entry_id            7SZT 
_cell.length_a            49.704 
_cell.length_b            74.323 
_cell.length_c            107.433 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7SZT 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? tetrameric 4 author_defined_assembly 1 
? tetrameric 4 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,B,F,H,I,J 1 1 
C,D,E,G 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 I N N 
? 3 J N N 
#
_chem_comp.formula           'C14 H31 O P' 
_chem_comp.formula_weight    246.369 
_chem_comp.id                9PD 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'Dodecyldimethylphosphine oxide' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     APO-12 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C14 P13 9PD sing 1 n n 
C03 C02 9PD sing 2 n n 
C03 C04 9PD sing 3 n n 
C02 C01 9PD sing 4 n n 
C12 P13 9PD sing 5 n n 
C12 C11 9PD sing 6 n n 
P13 O16 9PD doub 7 n n 
P13 C15 9PD sing 8 n n 
C04 C05 9PD sing 9 n n 
C05 C06 9PD sing 10 n n 
C11 C10 9PD sing 11 n n 
C09 C10 9PD sing 12 n n 
C09 C08 9PD sing 13 n n 
C06 C07 9PD sing 14 n n 
C07 C08 9PD sing 15 n n 
C01 H1 9PD sing 16 n n 
C01 H2 9PD sing 17 n n 
C01 H3 9PD sing 18 n n 
C02 H4 9PD sing 19 n n 
C02 H5 9PD sing 20 n n 
C03 H6 9PD sing 21 n n 
C03 H7 9PD sing 22 n n 
C04 H8 9PD sing 23 n n 
C04 H9 9PD sing 24 n n 
C05 H10 9PD sing 25 n n 
C05 H11 9PD sing 26 n n 
C06 H12 9PD sing 27 n n 
C06 H13 9PD sing 28 n n 
C07 H14 9PD sing 29 n n 
C07 H15 9PD sing 30 n n 
C08 H16 9PD sing 31 n n 
C08 H17 9PD sing 32 n n 
C09 H18 9PD sing 33 n n 
C09 H19 9PD sing 34 n n 
C10 H20 9PD sing 35 n n 
C10 H21 9PD sing 36 n n 
C11 H22 9PD sing 37 n n 
C11 H23 9PD sing 38 n n 
C12 H24 9PD sing 39 n n 
C12 H25 9PD sing 40 n n 
C14 H26 9PD sing 41 n n 
C14 H27 9PD sing 42 n n 
C14 H28 9PD sing 43 n n 
C15 H29 9PD sing 44 n n 
C15 H30 9PD sing 45 n n 
C15 H31 9PD sing 46 n n 
#
_atom_sites.entry_id                     7SZT 
_atom_sites.fract_transf_matrix[1][1]    0.020119 
_atom_sites.fract_transf_matrix[1][2]    0.007293 
_atom_sites.fract_transf_matrix[1][3]    0.000369 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.014311 
_atom_sites.fract_transf_matrix[2][3]    0.000922 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009328 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
I 3 9PD A 1 201 201 9PD LIG . 
J 3 9PD F 1 301 301 9PD LIG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C06 9PD . . . J 3 21.084 -11.193 -15.205 1 43.71 ? C06 9PD 301 F 1 
HETATM 2 C C07 9PD . . . J 3 22.035 -11.636 -14.096 1 35.35 ? C07 9PD 301 F 1 
HETATM 3 C C08 9PD . . . J 3 21.6 -12.949 -13.456 1 41.95 ? C08 9PD 301 F 1 
HETATM 4 C C09 9PD . . . J 3 22.806 -13.778 -13.031 1 30.82 ? C09 9PD 301 F 1 
HETATM 5 C C10 9PD . . . J 3 23.218 -14.742 -14.14 1 45.48 ? C10 9PD 301 F 1 
HETATM 6 C C11 9PD . . . J 3 24.424 -15.591 -13.753 1 35.26 ? C11 9PD 301 F 1 
HETATM 7 C C12 9PD . . . J 3 24.107 -17.08 -13.862 1 44.45 ? C12 9PD 301 F 1 
HETATM 8 P P13 9PD . . . J 3 25.576 -18.143 -13.442 1 56.3 ? P13 9PD 301 F 1 
HETATM 9 C C14 9PD . . . J 3 26.178 -17.75 -11.731 1 36.17 ? C14 9PD 301 F 1 
HETATM 10 C C15 9PD . . . J 3 26.957 -17.809 -14.644 1 43.44 ? C15 9PD 301 F 1 
HETATM 11 O O16 9PD . . . J 3 25.189 -19.55 -13.487 1 64.8 ? O16 9PD 301 F 1 
#
_model_server_stats.io_time_ms              53 
_model_server_stats.parse_time_ms           22 
_model_server_stats.create_model_time_ms    20 
_model_server_stats.query_time_ms           305 
_model_server_stats.encode_time_ms          5 
_model_server_stats.element_count           11 
#