data_7T1H # _model_server_result.job_id Lx54DBACIgJEjk3BqzIODQ _model_server_result.datetime_utc '2024-11-14 18:59:57' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t1h # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 7T1H # _exptl.entry_id 7T1H _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 396.486 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (8R)-2-{[(4-tert-butylphenyl)methyl]amino}-5-[(morpholin-4-yl)methyl][1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 71.26 _cell.angle_beta 85.82 _cell.angle_gamma 64.46 _cell.entry_id 7T1H _cell.length_a 51.14 _cell.length_b 52.77 _cell.length_c 70.57 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T1H _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C21 H28 N6 O2' _chem_comp.formula_weight 396.486 _chem_comp.id E5B _chem_comp.mon_nstd_flag . _chem_comp.name (8R)-2-{[(4-tert-butylphenyl)methyl]amino}-5-[(morpholin-4-yl)methyl][1,2,4]triazolo[1,5-a]pyrimidin-7(4H)-one _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C2 E5B doub 83 n n C12 O11 E5B sing 84 n n C12 C13 E5B sing 85 n n C10 O11 E5B sing 86 n n C10 C9 E5B sing 87 n n C2 C14 E5B sing 88 n n C2 N3 E5B sing 89 n n C14 C6 E5B doub 90 n n N8 C13 E5B sing 91 n n N8 C9 E5B sing 92 n n N8 C7 E5B sing 93 n n N3 N29 E5B sing 94 n y N3 C4 E5B sing 95 n y C6 C7 E5B sing 96 n n C6 N5 E5B sing 97 n n N29 C16 E5B doub 98 n y C4 N5 E5B sing 99 n n C4 N15 E5B doub 100 n y C16 N15 E5B sing 101 n y C16 N17 E5B sing 102 n n N17 C18 E5B sing 103 n n C20 C21 E5B doub 104 n y C20 C19 E5B sing 105 n y C18 C19 E5B sing 106 n n C21 C22 E5B sing 107 n y C19 C28 E5B doub 108 n y C24 C23 E5B sing 109 n n C22 C23 E5B sing 110 n n C22 C27 E5B doub 111 n y C28 C27 E5B sing 112 n y C23 C25 E5B sing 113 n n C23 C26 E5B sing 114 n n C20 H1 E5B sing 115 n n C28 H2 E5B sing 116 n n C21 H3 E5B sing 117 n n C27 H4 E5B sing 118 n n C14 H5 E5B sing 119 n n C9 H6 E5B sing 120 n n C9 H7 E5B sing 121 n n C13 H8 E5B sing 122 n n C13 H9 E5B sing 123 n n C10 H10 E5B sing 124 n n C10 H11 E5B sing 125 n n C12 H12 E5B sing 126 n n C12 H13 E5B sing 127 n n C24 H14 E5B sing 128 n n C24 H15 E5B sing 129 n n C24 H16 E5B sing 130 n n C25 H17 E5B sing 131 n n C25 H18 E5B sing 132 n n C25 H19 E5B sing 133 n n C26 H20 E5B sing 134 n n C26 H21 E5B sing 135 n n C26 H22 E5B sing 136 n n C18 H23 E5B sing 137 n n C18 H24 E5B sing 138 n n C7 H25 E5B sing 139 n n C7 H26 E5B sing 140 n n N5 H27 E5B sing 141 n n N17 H28 E5B sing 142 n n # _atom_sites.entry_id 7T1H _atom_sites.fract_transf_matrix[1][1] 0.019554 _atom_sites.fract_transf_matrix[1][2] -0.009344 _atom_sites.fract_transf_matrix[1][3] 0.001669 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021002 _atom_sites.fract_transf_matrix[2][3] -0.007146 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015008 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 E5B A 1 401 401 E5B UNL . D 3 GOL B 1 401 402 GOL GOL . E 4 HOH A 1 501 121 HOH HOH . E 4 HOH A 2 502 185 HOH HOH . E 4 HOH A 3 503 75 HOH HOH . E 4 HOH A 4 504 69 HOH HOH . E 4 HOH A 5 505 147 HOH HOH . E 4 HOH A 6 506 203 HOH HOH . E 4 HOH A 7 507 35 HOH HOH . E 4 HOH A 8 508 91 HOH HOH . E 4 HOH A 9 509 114 HOH HOH . E 4 HOH A 10 510 226 HOH HOH . E 4 HOH A 11 511 80 HOH HOH . E 4 HOH A 12 512 73 HOH HOH . E 4 HOH A 13 513 216 HOH HOH . E 4 HOH A 14 514 71 HOH HOH . E 4 HOH A 15 515 116 HOH HOH . E 4 HOH A 16 516 210 HOH HOH . E 4 HOH A 17 517 127 HOH HOH . E 4 HOH A 18 518 181 HOH HOH . E 4 HOH A 19 519 88 HOH HOH . E 4 HOH A 20 520 63 HOH HOH . E 4 HOH A 21 521 103 HOH HOH . E 4 HOH A 22 522 97 HOH HOH . E 4 HOH A 23 523 96 HOH HOH . E 4 HOH A 24 524 72 HOH HOH . E 4 HOH A 25 525 105 HOH HOH . E 4 HOH A 26 526 179 HOH HOH . E 4 HOH A 27 527 112 HOH HOH . E 4 HOH A 28 528 67 HOH HOH . E 4 HOH A 29 529 125 HOH HOH . E 4 HOH A 30 530 132 HOH HOH . E 4 HOH A 31 531 117 HOH HOH . E 4 HOH A 32 532 191 HOH HOH . E 4 HOH A 33 533 182 HOH HOH . E 4 HOH A 34 534 228 HOH HOH . E 4 HOH A 35 535 222 HOH HOH . E 4 HOH A 36 536 212 HOH HOH . E 4 HOH A 37 537 135 HOH HOH . E 4 HOH A 38 538 78 HOH HOH . E 4 HOH A 39 539 130 HOH HOH . E 4 HOH A 40 540 206 HOH HOH . E 4 HOH A 41 541 39 HOH HOH . E 4 HOH A 42 542 138 HOH HOH . E 4 HOH A 43 543 104 HOH HOH . E 4 HOH A 44 544 65 HOH HOH . E 4 HOH A 45 545 134 HOH HOH . E 4 HOH A 46 546 37 HOH HOH . E 4 HOH A 47 547 79 HOH HOH . E 4 HOH A 48 548 100 HOH HOH . E 4 HOH A 49 549 70 HOH HOH . E 4 HOH A 50 550 94 HOH HOH . E 4 HOH A 51 551 133 HOH HOH . E 4 HOH A 52 552 86 HOH HOH . E 4 HOH A 53 553 207 HOH HOH . E 4 HOH A 54 554 190 HOH HOH . E 4 HOH A 55 555 211 HOH HOH . E 4 HOH A 56 556 111 HOH HOH . E 4 HOH A 57 557 188 HOH HOH . E 4 HOH A 58 558 217 HOH HOH . E 4 HOH A 59 559 115 HOH HOH . E 4 HOH A 60 560 214 HOH HOH . E 4 HOH A 61 561 213 HOH HOH . E 4 HOH A 62 562 66 HOH HOH . E 4 HOH A 63 563 98 HOH HOH . E 4 HOH A 64 564 22 HOH HOH . E 4 HOH A 65 565 148 HOH HOH . E 4 HOH A 66 566 205 HOH HOH . E 4 HOH A 67 567 99 HOH HOH . E 4 HOH A 68 568 118 HOH HOH . E 4 HOH A 69 569 184 HOH HOH . E 4 HOH A 70 570 93 HOH HOH . E 4 HOH A 71 571 204 HOH HOH . E 4 HOH A 72 572 180 HOH HOH . E 4 HOH A 73 573 76 HOH HOH . E 4 HOH A 74 574 144 HOH HOH . E 4 HOH A 75 575 150 HOH HOH . E 4 HOH A 76 576 225 HOH HOH . E 4 HOH A 77 577 106 HOH HOH . E 4 HOH A 78 578 85 HOH HOH . E 4 HOH A 79 579 74 HOH HOH . E 4 HOH A 80 580 123 HOH HOH . E 4 HOH A 81 581 77 HOH HOH . E 4 HOH A 82 582 83 HOH HOH . E 4 HOH A 83 583 143 HOH HOH . E 4 HOH A 84 584 178 HOH HOH . E 4 HOH A 85 585 38 HOH HOH . E 4 HOH A 86 586 128 HOH HOH . E 4 HOH A 87 587 101 HOH HOH . E 4 HOH A 88 588 189 HOH HOH . E 4 HOH A 89 589 122 HOH HOH . E 4 HOH A 90 590 227 HOH HOH . E 4 HOH A 91 591 102 HOH HOH . E 4 HOH A 92 592 131 HOH HOH . E 4 HOH A 93 593 218 HOH HOH . E 4 HOH A 94 594 113 HOH HOH . E 4 HOH A 95 595 89 HOH HOH . E 4 HOH A 96 596 124 HOH HOH . E 4 HOH A 97 597 186 HOH HOH . E 4 HOH A 98 598 129 HOH HOH . E 4 HOH A 99 599 163 HOH HOH . E 4 HOH A 100 600 95 HOH HOH . E 4 HOH A 101 601 139 HOH HOH . E 4 HOH A 102 602 84 HOH HOH . E 4 HOH A 103 603 200 HOH HOH . E 4 HOH A 104 604 64 HOH HOH . E 4 HOH A 105 605 42 HOH HOH . E 4 HOH A 106 606 126 HOH HOH . E 4 HOH A 107 607 107 HOH HOH . E 4 HOH A 108 608 220 HOH HOH . E 4 HOH A 109 609 154 HOH HOH . E 4 HOH A 110 610 145 HOH HOH . E 4 HOH A 111 611 137 HOH HOH . E 4 HOH A 112 612 82 HOH HOH . E 4 HOH A 113 613 193 HOH HOH . E 4 HOH A 114 614 215 HOH HOH . E 4 HOH A 115 615 68 HOH HOH . E 4 HOH A 116 616 170 HOH HOH . E 4 HOH A 117 617 108 HOH HOH . E 4 HOH A 118 618 109 HOH HOH . E 4 HOH A 119 619 223 HOH HOH . E 4 HOH A 120 620 219 HOH HOH . E 4 HOH A 121 621 87 HOH HOH . E 4 HOH A 122 622 208 HOH HOH . E 4 HOH A 123 623 164 HOH HOH . E 4 HOH A 124 624 90 HOH HOH . E 4 HOH A 125 625 209 HOH HOH . E 4 HOH A 126 626 136 HOH HOH . E 4 HOH A 127 627 194 HOH HOH . E 4 HOH A 128 628 201 HOH HOH . E 4 HOH A 129 629 81 HOH HOH . E 4 HOH A 130 630 183 HOH HOH . E 4 HOH A 131 631 187 HOH HOH . E 4 HOH A 132 632 92 HOH HOH . E 4 HOH A 133 633 169 HOH HOH . F 4 HOH B 1 501 26 HOH HOH . F 4 HOH B 2 502 160 HOH HOH . F 4 HOH B 3 503 8 HOH HOH . F 4 HOH B 4 504 11 HOH HOH . F 4 HOH B 5 505 152 HOH HOH . F 4 HOH B 6 506 50 HOH HOH . F 4 HOH B 7 507 32 HOH HOH . F 4 HOH B 8 508 30 HOH HOH . F 4 HOH B 9 509 156 HOH HOH . F 4 HOH B 10 510 173 HOH HOH . F 4 HOH B 11 511 119 HOH HOH . F 4 HOH B 12 512 44 HOH HOH . F 4 HOH B 13 513 199 HOH HOH . F 4 HOH B 14 514 28 HOH HOH . F 4 HOH B 15 515 159 HOH HOH . F 4 HOH B 16 516 20 HOH HOH . F 4 HOH B 17 517 40 HOH HOH . F 4 HOH B 18 518 176 HOH HOH . F 4 HOH B 19 519 141 HOH HOH . F 4 HOH B 20 520 3 HOH HOH . F 4 HOH B 21 521 14 HOH HOH . F 4 HOH B 22 522 10 HOH HOH . F 4 HOH B 23 523 9 HOH HOH . F 4 HOH B 24 524 12 HOH HOH . F 4 HOH B 25 525 221 HOH HOH . F 4 HOH B 26 526 58 HOH HOH . F 4 HOH B 27 527 13 HOH HOH . F 4 HOH B 28 528 224 HOH HOH . F 4 HOH B 29 529 146 HOH HOH . F 4 HOH B 30 530 153 HOH HOH . F 4 HOH B 31 531 34 HOH HOH . F 4 HOH B 32 532 177 HOH HOH . F 4 HOH B 33 533 56 HOH HOH . F 4 HOH B 34 534 24 HOH HOH . F 4 HOH B 35 535 4 HOH HOH . F 4 HOH B 36 536 36 HOH HOH . F 4 HOH B 37 537 166 HOH HOH . F 4 HOH B 38 538 57 HOH HOH . F 4 HOH B 39 539 7 HOH HOH . F 4 HOH B 40 540 197 HOH HOH . F 4 HOH B 41 541 25 HOH HOH . F 4 HOH B 42 542 2 HOH HOH . F 4 HOH B 43 543 33 HOH HOH . F 4 HOH B 44 544 49 HOH HOH . F 4 HOH B 45 545 15 HOH HOH . F 4 HOH B 46 546 120 HOH HOH . F 4 HOH B 47 547 198 HOH HOH . F 4 HOH B 48 548 168 HOH HOH . F 4 HOH B 49 549 51 HOH HOH . F 4 HOH B 50 550 18 HOH HOH . F 4 HOH B 51 551 155 HOH HOH . F 4 HOH B 52 552 62 HOH HOH . F 4 HOH B 53 553 52 HOH HOH . F 4 HOH B 54 554 21 HOH HOH . F 4 HOH B 55 555 19 HOH HOH . F 4 HOH B 56 556 151 HOH HOH . F 4 HOH B 57 557 29 HOH HOH . F 4 HOH B 58 558 196 HOH HOH . F 4 HOH B 59 559 167 HOH HOH . F 4 HOH B 60 560 53 HOH HOH . F 4 HOH B 61 561 142 HOH HOH . F 4 HOH B 62 562 140 HOH HOH . F 4 HOH B 63 563 61 HOH HOH . F 4 HOH B 64 564 41 HOH HOH . F 4 HOH B 65 565 110 HOH HOH . F 4 HOH B 66 566 48 HOH HOH . F 4 HOH B 67 567 195 HOH HOH . F 4 HOH B 68 568 60 HOH HOH . F 4 HOH B 69 569 59 HOH HOH . F 4 HOH B 70 570 23 HOH HOH . F 4 HOH B 71 571 161 HOH HOH . F 4 HOH B 72 572 171 HOH HOH . F 4 HOH B 73 573 46 HOH HOH . F 4 HOH B 74 574 31 HOH HOH . F 4 HOH B 75 575 16 HOH HOH . F 4 HOH B 76 576 17 HOH HOH . F 4 HOH B 77 577 5 HOH HOH . F 4 HOH B 78 578 55 HOH HOH . F 4 HOH B 79 579 43 HOH HOH . F 4 HOH B 80 580 172 HOH HOH . F 4 HOH B 81 581 47 HOH HOH . F 4 HOH B 82 582 157 HOH HOH . F 4 HOH B 83 583 1 HOH HOH . F 4 HOH B 84 584 54 HOH HOH . F 4 HOH B 85 585 45 HOH HOH . F 4 HOH B 86 586 174 HOH HOH . F 4 HOH B 87 587 6 HOH HOH . F 4 HOH B 88 588 27 HOH HOH . F 4 HOH B 89 589 149 HOH HOH . F 4 HOH B 90 590 165 HOH HOH . F 4 HOH B 91 591 229 HOH HOH . F 4 HOH B 92 592 175 HOH HOH . F 4 HOH B 93 593 162 HOH HOH . F 4 HOH B 94 594 202 HOH HOH . F 4 HOH B 95 595 158 HOH HOH . F 4 HOH B 96 596 192 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C20 E5B . . . C 2 -0.055 -2.989 -14.018 1 46.58 ? C20 E5B 401 A 1 HETATM 2 C C28 E5B . . . C 2 -0.017 -1.996 -11.877 1 39.61 ? C28 E5B 401 A 1 HETATM 3 C C21 E5B . . . C 2 0.186 -4.221 -13.434 1 43.69 ? C21 E5B 401 A 1 HETATM 4 C C27 E5B . . . C 2 0.213 -3.216 -11.295 1 39.41 ? C27 E5B 401 A 1 HETATM 5 C C19 E5B . . . C 2 -0.156 -1.857 -13.237 1 38.71 ? C19 E5B 401 A 1 HETATM 6 C C22 E5B . . . C 2 0.324 -4.358 -12.06 1 45.04 ? C22 E5B 401 A 1 HETATM 7 C C16 E5B . . . C 2 -1.442 -0.497 -15.961 1 43.01 ? C16 E5B 401 A 1 HETATM 8 C C4 E5B . . . C 2 -3.443 -1.048 -16.285 1 47.58 ? C4 E5B 401 A 1 HETATM 9 C C14 E5B . . . C 2 -4.928 -1.101 -18.642 1 58.6 ? C14 E5B 401 A 1 HETATM 10 C C6 E5B . . . C 2 -5.443 -1.46 -17.452 1 63.43 ? C6 E5B 401 A 1 HETATM 11 C C2 E5B . . . C 2 -3.507 -0.665 -18.722 1 60.16 ? C2 E5B 401 A 1 HETATM 12 C C9 E5B . . . C 2 -8.775 -3.379 -17.805 1 76.83 ? C9 E5B 401 A 1 HETATM 13 C C13 E5B . . . C 2 -6.487 -4.196 -18.116 1 77.39 ? C13 E5B 401 A 1 HETATM 14 C C10 E5B . . . C 2 -9.253 -4.458 -18.756 1 80.3 ? C10 E5B 401 A 1 HETATM 15 C C12 E5B . . . C 2 -7.092 -5.274 -18.983 1 78.65 ? C12 E5B 401 A 1 HETATM 16 C C24 E5B . . . C 2 1.196 -6.727 -12.321 1 47.27 ? C24 E5B 401 A 1 HETATM 17 C C25 E5B . . . C 2 -0.65 -6.237 -10.742 1 49.27 ? C25 E5B 401 A 1 HETATM 18 C C26 E5B . . . C 2 1.659 -5.501 -10.304 1 45.16 ? C26 E5B 401 A 1 HETATM 19 C C18 E5B . . . C 2 -0.407 -0.497 -13.772 1 39.46 ? C18 E5B 401 A 1 HETATM 20 C C7 E5B . . . C 2 -6.873 -1.904 -17.316 1 73.38 ? C7 E5B 401 A 1 HETATM 21 C C23 E5B . . . C 2 0.608 -5.693 -11.38 1 47.4 ? C23 E5B 401 A 1 HETATM 22 N N15 E5B . . . C 2 -2.57 -0.938 -15.333 1 44.78 ? N15 E5B 401 A 1 HETATM 23 N N29 E5B . . . C 2 -1.599 -0.337 -17.277 1 46.51 ? N29 E5B 401 A 1 HETATM 24 N N3 E5B . . . C 2 -2.878 -0.679 -17.465 1 50.1 ? N3 E5B 401 A 1 HETATM 25 N N5 E5B . . . C 2 -4.721 -1.437 -16.283 1 51.38 ? N5 E5B 401 A 1 HETATM 26 N N17 E5B . . . C 2 -0.328 -0.31 -15.22 1 41.24 ? N17 E5B 401 A 1 HETATM 27 N N8 E5B . . . C 2 -7.375 -3.012 -18.183 1 79.28 ? N8 E5B 401 A 1 HETATM 28 O O1 E5B . . . C 2 -2.938 -0.332 -19.77 1 61.96 ? O1 E5B 401 A 1 HETATM 29 O O11 E5B . . . C 2 -8.421 -5.602 -18.588 1 79.18 ? O11 E5B 401 A 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 343 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 29 #