data_7T2Z # _model_server_result.job_id nvTNGJK0TeN3lEEaHlDqTw _model_server_result.datetime_utc '2024-11-15 13:45:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 7T2Z # _exptl.entry_id 7T2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7T2Z _cell.length_a 57.315 _cell.length_b 57.315 _cell.length_c 121.007 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 113 n n N1 C10 FMN doub 114 n n C2 O2 FMN doub 115 n n C2 N3 FMN sing 116 n n N3 C4 FMN sing 117 n n N3 HN3 FMN sing 118 n n C4 O4 FMN doub 119 n n C4 C4A FMN sing 120 n n C4A N5 FMN doub 121 n n C4A C10 FMN sing 122 n n N5 C5A FMN sing 123 n n C5A C6 FMN doub 124 n y C5A C9A FMN sing 125 n y C6 C7 FMN sing 126 n y C6 H6 FMN sing 127 n n C7 C7M FMN sing 128 n n C7 C8 FMN doub 129 n y C7M HM71 FMN sing 130 n n C7M HM72 FMN sing 131 n n C7M HM73 FMN sing 132 n n C8 C8M FMN sing 133 n n C8 C9 FMN sing 134 n y C8M HM81 FMN sing 135 n n C8M HM82 FMN sing 136 n n C8M HM83 FMN sing 137 n n C9 C9A FMN doub 138 n y C9 H9 FMN sing 139 n n C9A N10 FMN sing 140 n n N10 C10 FMN sing 141 n n N10 C1' FMN sing 142 n n C1' C2' FMN sing 143 n n C1' "H1'1" FMN sing 144 n n C1' "H1'2" FMN sing 145 n n C2' O2' FMN sing 146 n n C2' C3' FMN sing 147 n n C2' H2' FMN sing 148 n n O2' HO2' FMN sing 149 n n C3' O3' FMN sing 150 n n C3' C4' FMN sing 151 n n C3' H3' FMN sing 152 n n O3' HO3' FMN sing 153 n n C4' O4' FMN sing 154 n n C4' C5' FMN sing 155 n n C4' H4' FMN sing 156 n n O4' HO4' FMN sing 157 n n C5' O5' FMN sing 158 n n C5' "H5'1" FMN sing 159 n n C5' "H5'2" FMN sing 160 n n O5' P FMN sing 161 n n P O1P FMN doub 162 n n P O2P FMN sing 163 n n P O3P FMN sing 164 n n O2P HOP2 FMN sing 165 n n O3P HOP3 FMN sing 166 n n # _atom_sites.entry_id 7T2Z _atom_sites.fract_transf_matrix[1][1] 0.017448 _atom_sites.fract_transf_matrix[1][2] 0.010073 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008264 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 301 EDO EDO . D 2 EDO A 1 302 301 EDO EDO . E 3 FMN A 1 303 401 FMN FMN . F 4 EIV A 1 304 501 EIV LIG . G 5 ACY B 1 501 501 ACY ACY . H 3 FMN B 1 502 401 FMN FMN . I 6 HOH A 1 401 49 HOH HOH . I 6 HOH A 2 402 38 HOH HOH . I 6 HOH A 3 403 42 HOH HOH . I 6 HOH A 4 404 12 HOH HOH . I 6 HOH A 5 405 14 HOH HOH . I 6 HOH A 6 406 29 HOH HOH . I 6 HOH A 7 407 5 HOH HOH . I 6 HOH A 8 408 2 HOH HOH . I 6 HOH A 9 409 59 HOH HOH . I 6 HOH A 10 410 65 HOH HOH . I 6 HOH A 11 411 58 HOH HOH . I 6 HOH A 12 412 45 HOH HOH . I 6 HOH A 13 413 25 HOH HOH . I 6 HOH A 14 414 54 HOH HOH . I 6 HOH A 15 415 30 HOH HOH . I 6 HOH A 16 416 36 HOH HOH . I 6 HOH A 17 417 1 HOH HOH . I 6 HOH A 18 418 28 HOH HOH . I 6 HOH A 19 419 7 HOH HOH . I 6 HOH A 20 420 46 HOH HOH . I 6 HOH A 21 421 37 HOH HOH . I 6 HOH A 22 422 78 HOH HOH . I 6 HOH A 23 423 50 HOH HOH . I 6 HOH A 24 424 31 HOH HOH . I 6 HOH A 25 425 26 HOH HOH . I 6 HOH A 26 426 32 HOH HOH . I 6 HOH A 27 427 20 HOH HOH . I 6 HOH A 28 428 8 HOH HOH . I 6 HOH A 29 429 21 HOH HOH . I 6 HOH A 30 430 74 HOH HOH . I 6 HOH A 31 431 15 HOH HOH . I 6 HOH A 32 432 75 HOH HOH . I 6 HOH A 33 433 67 HOH HOH . I 6 HOH A 34 434 79 HOH HOH . I 6 HOH A 35 435 73 HOH HOH . I 6 HOH A 36 436 81 HOH HOH . I 6 HOH A 37 437 90 HOH HOH . J 6 HOH B 1 601 19 HOH HOH . J 6 HOH B 2 602 22 HOH HOH . J 6 HOH B 3 603 51 HOH HOH . J 6 HOH B 4 604 4 HOH HOH . J 6 HOH B 5 605 69 HOH HOH . J 6 HOH B 6 606 6 HOH HOH . J 6 HOH B 7 607 44 HOH HOH . J 6 HOH B 8 608 40 HOH HOH . J 6 HOH B 9 609 17 HOH HOH . J 6 HOH B 10 610 35 HOH HOH . J 6 HOH B 11 611 3 HOH HOH . J 6 HOH B 12 612 27 HOH HOH . J 6 HOH B 13 613 39 HOH HOH . J 6 HOH B 14 614 10 HOH HOH . J 6 HOH B 15 615 11 HOH HOH . J 6 HOH B 16 616 16 HOH HOH . J 6 HOH B 17 617 24 HOH HOH . J 6 HOH B 18 618 34 HOH HOH . J 6 HOH B 19 619 9 HOH HOH . J 6 HOH B 20 620 63 HOH HOH . J 6 HOH B 21 621 48 HOH HOH . J 6 HOH B 22 622 53 HOH HOH . J 6 HOH B 23 623 64 HOH HOH . J 6 HOH B 24 624 33 HOH HOH . J 6 HOH B 25 625 85 HOH HOH . J 6 HOH B 26 626 23 HOH HOH . J 6 HOH B 27 627 43 HOH HOH . J 6 HOH B 28 628 87 HOH HOH . J 6 HOH B 29 629 61 HOH HOH . J 6 HOH B 30 630 41 HOH HOH . J 6 HOH B 31 631 55 HOH HOH . J 6 HOH B 32 632 47 HOH HOH . J 6 HOH B 33 633 62 HOH HOH . J 6 HOH B 34 634 68 HOH HOH . J 6 HOH B 35 635 70 HOH HOH . J 6 HOH B 36 636 80 HOH HOH . J 6 HOH B 37 637 18 HOH HOH . J 6 HOH B 38 638 71 HOH HOH . J 6 HOH B 39 639 77 HOH HOH . J 6 HOH B 40 640 89 HOH HOH . J 6 HOH B 41 641 76 HOH HOH . J 6 HOH B 42 642 66 HOH HOH . J 6 HOH B 43 643 57 HOH HOH . J 6 HOH B 44 644 52 HOH HOH . J 6 HOH B 45 645 88 HOH HOH . J 6 HOH B 46 646 60 HOH HOH . J 6 HOH B 47 647 84 HOH HOH . J 6 HOH B 48 648 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . E 3 -18.475 15.041 11.047 1 41.99 ? N1 FMN 303 A 1 HETATM 2 C C2 FMN . . . E 3 -19.233 15.647 11.982 1 47.01 ? C2 FMN 303 A 1 HETATM 3 O O2 FMN . . . E 3 -19.688 16.792 11.795 1 44.4 ? O2 FMN 303 A 1 HETATM 4 N N3 FMN . . . E 3 -19.508 15.057 13.18 1 45.19 ? N3 FMN 303 A 1 HETATM 5 C C4 FMN . . . E 3 -19.076 13.794 13.502 1 42.7 ? C4 FMN 303 A 1 HETATM 6 O O4 FMN . . . E 3 -19.376 13.314 14.6 1 39.99 ? O4 FMN 303 A 1 HETATM 7 C C4A FMN . . . E 3 -18.336 13.087 12.498 1 40.14 ? C4A FMN 303 A 1 HETATM 8 N N5 FMN . . . E 3 -17.963 11.838 12.721 1 41.78 ? N5 FMN 303 A 1 HETATM 9 C C5A FMN . . . E 3 -17.454 11.136 11.656 1 41.01 ? C5A FMN 303 A 1 HETATM 10 C C6 FMN . . . E 3 -17.323 9.736 11.766 1 36.58 ? C6 FMN 303 A 1 HETATM 11 C C7 FMN . . . E 3 -16.949 8.955 10.694 1 37.21 ? C7 FMN 303 A 1 HETATM 12 C C7M FMN . . . E 3 -16.92 7.45 10.804 1 35.39 ? C7M FMN 303 A 1 HETATM 13 C C8 FMN . . . E 3 -16.643 9.578 9.469 1 36.96 ? C8 FMN 303 A 1 HETATM 14 C C8M FMN . . . E 3 -16.325 8.743 8.255 1 29.66 ? C8M FMN 303 A 1 HETATM 15 C C9 FMN . . . E 3 -16.701 10.952 9.358 1 38.35 ? C9 FMN 303 A 1 HETATM 16 C C9A FMN . . . E 3 -17.162 11.749 10.422 1 41.78 ? C9A FMN 303 A 1 HETATM 17 N N10 FMN . . . E 3 -17.398 13.118 10.293 1 40.44 ? N10 FMN 303 A 1 HETATM 18 C C10 FMN . . . E 3 -18.098 13.8 11.265 1 42.65 ? C10 FMN 303 A 1 HETATM 19 C C1' FMN . . . E 3 -17.178 13.747 8.98 1 38.5 ? C1' FMN 303 A 1 HETATM 20 C C2' FMN . . . E 3 -15.707 13.97 8.681 1 39.38 ? C2' FMN 303 A 1 HETATM 21 O O2' FMN . . . E 3 -15.218 15.068 9.435 1 38.5 ? O2' FMN 303 A 1 HETATM 22 C C3' FMN . . . E 3 -15.548 14.198 7.175 1 39.09 ? C3' FMN 303 A 1 HETATM 23 O O3' FMN . . . E 3 -15.827 12.964 6.53 1 39.09 ? O3' FMN 303 A 1 HETATM 24 C C4' FMN . . . E 3 -14.17 14.643 6.689 1 40.92 ? C4' FMN 303 A 1 HETATM 25 O O4' FMN . . . E 3 -13.802 15.876 7.305 1 42.18 ? O4' FMN 303 A 1 HETATM 26 C C5' FMN . . . E 3 -14.123 14.789 5.184 1 34.09 ? C5' FMN 303 A 1 HETATM 27 O O5' FMN . . . E 3 -15.135 15.734 4.741 1 39.66 ? O5' FMN 303 A 1 HETATM 28 P P FMN . . . E 3 -16.234 15.24 3.652 1 42.84 ? P FMN 303 A 1 HETATM 29 O O1P FMN . . . E 3 -15.556 14.901 2.359 1 43.98 ? O1P FMN 303 A 1 HETATM 30 O O2P FMN . . . E 3 -16.927 14.014 4.232 1 46.9 -1 O2P FMN 303 A 1 HETATM 31 O O3P FMN . . . E 3 -17.157 16.427 3.535 1 46.03 ? O3P FMN 303 A 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 321 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 31 #