data_7T2Z # _model_server_result.job_id UHtMvjwunoLdxxZpBQ14Mg _model_server_result.datetime_utc '2024-11-15 13:34:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t2z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":502}' # _entry.id 7T2Z # _exptl.entry_id 7T2Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 456.344 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FLAVIN MONONUCLEOTIDE' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 7T2Z _cell.length_a 57.315 _cell.length_b 57.315 _cell.length_c 121.007 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T2Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 E N N ? 3 H N N # _chem_comp.formula 'C17 H21 N4 O9 P' _chem_comp.formula_weight 456.344 _chem_comp.id FMN _chem_comp.mon_nstd_flag . _chem_comp.name 'FLAVIN MONONUCLEOTIDE' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'RIBOFLAVIN MONOPHOSPHATE' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 FMN sing 113 n n N1 C10 FMN doub 114 n n C2 O2 FMN doub 115 n n C2 N3 FMN sing 116 n n N3 C4 FMN sing 117 n n N3 HN3 FMN sing 118 n n C4 O4 FMN doub 119 n n C4 C4A FMN sing 120 n n C4A N5 FMN doub 121 n n C4A C10 FMN sing 122 n n N5 C5A FMN sing 123 n n C5A C6 FMN doub 124 n y C5A C9A FMN sing 125 n y C6 C7 FMN sing 126 n y C6 H6 FMN sing 127 n n C7 C7M FMN sing 128 n n C7 C8 FMN doub 129 n y C7M HM71 FMN sing 130 n n C7M HM72 FMN sing 131 n n C7M HM73 FMN sing 132 n n C8 C8M FMN sing 133 n n C8 C9 FMN sing 134 n y C8M HM81 FMN sing 135 n n C8M HM82 FMN sing 136 n n C8M HM83 FMN sing 137 n n C9 C9A FMN doub 138 n y C9 H9 FMN sing 139 n n C9A N10 FMN sing 140 n n N10 C10 FMN sing 141 n n N10 C1' FMN sing 142 n n C1' C2' FMN sing 143 n n C1' "H1'1" FMN sing 144 n n C1' "H1'2" FMN sing 145 n n C2' O2' FMN sing 146 n n C2' C3' FMN sing 147 n n C2' H2' FMN sing 148 n n O2' HO2' FMN sing 149 n n C3' O3' FMN sing 150 n n C3' C4' FMN sing 151 n n C3' H3' FMN sing 152 n n O3' HO3' FMN sing 153 n n C4' O4' FMN sing 154 n n C4' C5' FMN sing 155 n n C4' H4' FMN sing 156 n n O4' HO4' FMN sing 157 n n C5' O5' FMN sing 158 n n C5' "H5'1" FMN sing 159 n n C5' "H5'2" FMN sing 160 n n O5' P FMN sing 161 n n P O1P FMN doub 162 n n P O2P FMN sing 163 n n P O3P FMN sing 164 n n O2P HOP2 FMN sing 165 n n O3P HOP3 FMN sing 166 n n # _atom_sites.entry_id 7T2Z _atom_sites.fract_transf_matrix[1][1] 0.017448 _atom_sites.fract_transf_matrix[1][2] 0.010073 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020147 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008264 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO A 1 301 301 EDO EDO . D 2 EDO A 1 302 301 EDO EDO . E 3 FMN A 1 303 401 FMN FMN . F 4 EIV A 1 304 501 EIV LIG . G 5 ACY B 1 501 501 ACY ACY . H 3 FMN B 1 502 401 FMN FMN . I 6 HOH A 1 401 49 HOH HOH . I 6 HOH A 2 402 38 HOH HOH . I 6 HOH A 3 403 42 HOH HOH . I 6 HOH A 4 404 12 HOH HOH . I 6 HOH A 5 405 14 HOH HOH . I 6 HOH A 6 406 29 HOH HOH . I 6 HOH A 7 407 5 HOH HOH . I 6 HOH A 8 408 2 HOH HOH . I 6 HOH A 9 409 59 HOH HOH . I 6 HOH A 10 410 65 HOH HOH . I 6 HOH A 11 411 58 HOH HOH . I 6 HOH A 12 412 45 HOH HOH . I 6 HOH A 13 413 25 HOH HOH . I 6 HOH A 14 414 54 HOH HOH . I 6 HOH A 15 415 30 HOH HOH . I 6 HOH A 16 416 36 HOH HOH . I 6 HOH A 17 417 1 HOH HOH . I 6 HOH A 18 418 28 HOH HOH . I 6 HOH A 19 419 7 HOH HOH . I 6 HOH A 20 420 46 HOH HOH . I 6 HOH A 21 421 37 HOH HOH . I 6 HOH A 22 422 78 HOH HOH . I 6 HOH A 23 423 50 HOH HOH . I 6 HOH A 24 424 31 HOH HOH . I 6 HOH A 25 425 26 HOH HOH . I 6 HOH A 26 426 32 HOH HOH . I 6 HOH A 27 427 20 HOH HOH . I 6 HOH A 28 428 8 HOH HOH . I 6 HOH A 29 429 21 HOH HOH . I 6 HOH A 30 430 74 HOH HOH . I 6 HOH A 31 431 15 HOH HOH . I 6 HOH A 32 432 75 HOH HOH . I 6 HOH A 33 433 67 HOH HOH . I 6 HOH A 34 434 79 HOH HOH . I 6 HOH A 35 435 73 HOH HOH . I 6 HOH A 36 436 81 HOH HOH . I 6 HOH A 37 437 90 HOH HOH . J 6 HOH B 1 601 19 HOH HOH . J 6 HOH B 2 602 22 HOH HOH . J 6 HOH B 3 603 51 HOH HOH . J 6 HOH B 4 604 4 HOH HOH . J 6 HOH B 5 605 69 HOH HOH . J 6 HOH B 6 606 6 HOH HOH . J 6 HOH B 7 607 44 HOH HOH . J 6 HOH B 8 608 40 HOH HOH . J 6 HOH B 9 609 17 HOH HOH . J 6 HOH B 10 610 35 HOH HOH . J 6 HOH B 11 611 3 HOH HOH . J 6 HOH B 12 612 27 HOH HOH . J 6 HOH B 13 613 39 HOH HOH . J 6 HOH B 14 614 10 HOH HOH . J 6 HOH B 15 615 11 HOH HOH . J 6 HOH B 16 616 16 HOH HOH . J 6 HOH B 17 617 24 HOH HOH . J 6 HOH B 18 618 34 HOH HOH . J 6 HOH B 19 619 9 HOH HOH . J 6 HOH B 20 620 63 HOH HOH . J 6 HOH B 21 621 48 HOH HOH . J 6 HOH B 22 622 53 HOH HOH . J 6 HOH B 23 623 64 HOH HOH . J 6 HOH B 24 624 33 HOH HOH . J 6 HOH B 25 625 85 HOH HOH . J 6 HOH B 26 626 23 HOH HOH . J 6 HOH B 27 627 43 HOH HOH . J 6 HOH B 28 628 87 HOH HOH . J 6 HOH B 29 629 61 HOH HOH . J 6 HOH B 30 630 41 HOH HOH . J 6 HOH B 31 631 55 HOH HOH . J 6 HOH B 32 632 47 HOH HOH . J 6 HOH B 33 633 62 HOH HOH . J 6 HOH B 34 634 68 HOH HOH . J 6 HOH B 35 635 70 HOH HOH . J 6 HOH B 36 636 80 HOH HOH . J 6 HOH B 37 637 18 HOH HOH . J 6 HOH B 38 638 71 HOH HOH . J 6 HOH B 39 639 77 HOH HOH . J 6 HOH B 40 640 89 HOH HOH . J 6 HOH B 41 641 76 HOH HOH . J 6 HOH B 42 642 66 HOH HOH . J 6 HOH B 43 643 57 HOH HOH . J 6 HOH B 44 644 52 HOH HOH . J 6 HOH B 45 645 88 HOH HOH . J 6 HOH B 46 646 60 HOH HOH . J 6 HOH B 47 647 84 HOH HOH . J 6 HOH B 48 648 72 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 FMN . . . H 3 -14.642 -13.752 1.231 1 28.95 ? N1 FMN 502 B 1 HETATM 2 C C2 FMN . . . H 3 -13.61 -14.522 0.838 1 36.27 ? C2 FMN 502 B 1 HETATM 3 O O2 FMN . . . H 3 -13.744 -15.354 -0.08 1 31.92 ? O2 FMN 502 B 1 HETATM 4 N N3 FMN . . . H 3 -12.389 -14.455 1.442 1 32.58 ? N3 FMN 502 B 1 HETATM 5 C C4 FMN . . . H 3 -12.11 -13.573 2.456 1 31.83 ? C4 FMN 502 B 1 HETATM 6 O O4 FMN . . . H 3 -10.976 -13.553 2.945 1 32.14 ? O4 FMN 502 B 1 HETATM 7 C C4A FMN . . . H 3 -13.161 -12.679 2.843 1 30.92 ? C4A FMN 502 B 1 HETATM 8 N N5 FMN . . . H 3 -12.927 -11.754 3.758 1 34.1 ? N5 FMN 502 B 1 HETATM 9 C C5A FMN . . . H 3 -13.889 -10.789 3.937 1 31.69 ? C5A FMN 502 B 1 HETATM 10 C C6 FMN . . . H 3 -13.563 -9.633 4.675 1 27.63 ? C6 FMN 502 B 1 HETATM 11 C C7 FMN . . . H 3 -14.432 -8.569 4.777 1 29.83 ? C7 FMN 502 B 1 HETATM 12 C C7M FMN . . . H 3 -14.02 -7.297 5.479 1 24.87 ? C7M FMN 502 B 1 HETATM 13 C C8 FMN . . . H 3 -15.7 -8.659 4.172 1 30.69 ? C8 FMN 502 B 1 HETATM 14 C C8M FMN . . . H 3 -16.631 -7.476 4.187 1 25.92 ? C8M FMN 502 B 1 HETATM 15 C C9 FMN . . . H 3 -16.064 -9.809 3.502 1 27.25 ? C9 FMN 502 B 1 HETATM 16 C C9A FMN . . . H 3 -15.153 -10.865 3.32 1 31.44 ? C9A FMN 502 B 1 HETATM 17 N N10 FMN . . . H 3 -15.425 -11.966 2.506 1 30.08 ? N10 FMN 502 B 1 HETATM 18 C C10 FMN . . . H 3 -14.415 -12.832 2.144 1 29.47 ? C10 FMN 502 B 1 HETATM 19 C C1' FMN . . . H 3 -16.711 -12.008 1.789 1 29.88 ? C1' FMN 502 B 1 HETATM 20 C C2' FMN . . . H 3 -17.869 -12.388 2.693 1 32.48 ? C2' FMN 502 B 1 HETATM 21 O O2' FMN . . . H 3 -17.831 -13.777 2.974 1 35.29 ? O2' FMN 502 B 1 HETATM 22 C C3' FMN . . . H 3 -19.174 -11.981 2.003 1 31.75 ? C3' FMN 502 B 1 HETATM 23 O O3' FMN . . . H 3 -19.221 -10.561 1.993 1 32.34 ? O3' FMN 502 B 1 HETATM 24 C C4' FMN . . . H 3 -20.472 -12.456 2.654 1 34.72 ? C4' FMN 502 B 1 HETATM 25 O O4' FMN . . . H 3 -20.499 -13.881 2.719 1 32.93 ? O4' FMN 502 B 1 HETATM 26 C C5' FMN . . . H 3 -21.692 -11.954 1.912 1 35.78 ? C5' FMN 502 B 1 HETATM 27 O O5' FMN . . . H 3 -21.645 -12.369 0.518 1 37.1 ? O5' FMN 502 B 1 HETATM 28 P P FMN . . . H 3 -21.714 -11.254 -0.64 1 35.92 ? P FMN 502 B 1 HETATM 29 O O1P FMN . . . H 3 -23.036 -10.549 -0.591 1 36.22 ? O1P FMN 502 B 1 HETATM 30 O O2P FMN . . . H 3 -20.573 -10.274 -0.391 1 39.18 -1 O2P FMN 502 B 1 HETATM 31 O O3P FMN . . . H 3 -21.524 -12.054 -1.904 1 35.94 ? O3P FMN 502 B 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 42 _model_server_stats.query_time_ms 434 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 31 #