data_7T36
#
_model_server_result.job_id            UtIDYSUu0YJ4mMu9yl5SMw 
_model_server_result.datetime_utc      '2024-11-04 18:32:32' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7t36 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"B","auth_seq_id":1701}' 
#
_entry.id    7T36 
#
_exptl.entry_id    7T36 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              342.46 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            (3R)-4-[6-{1-[diamino(hydroxy)-lambda~4~-sulfanyl]cyclopropyl}-2-(methylsulfanyl)pyrimidin-4-yl]-3-methylmorpholine 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7T36 
_cell.length_a            45.3 
_cell.length_b            54.299 
_cell.length_c            122.709 
_cell.Z_PDB               4 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7T36 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      2 
_struct_asym.id                             B 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C13 H20 N5 O2 S2 1' 
_chem_comp.formula_weight    342.46 
_chem_comp.id                EIO 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              (3R)-4-[6-{1-[diamino(hydroxy)-lambda~4~-sulfanyl]cyclopropyl}-2-(methylsulfanyl)pyrimidin-4-yl]-3-methylmorpholine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
C13 C08 EIO sing 92 n n 
C15 N14 EIO doub 93 n y 
C15 N18 EIO sing 94 n y 
C15 S16 EIO sing 95 n n 
C17 S16 EIO sing 96 n n 
C20 C03 EIO sing 97 n n 
C20 C19 EIO sing 98 n n 
C03 C04 EIO sing 99 n n 
C03 C19 EIO sing 100 n n 
C03 S02 EIO sing 101 n n 
C04 C05 EIO sing 102 n y 
C04 N18 EIO doub 103 n y 
C05 C06 EIO doub 104 n y 
C06 N07 EIO sing 105 n n 
C06 N14 EIO sing 106 n y 
C08 C09 EIO sing 107 n n 
C08 N07 EIO sing 108 n n 
C09 O10 EIO sing 109 n n 
C11 C12 EIO sing 110 n n 
C11 O10 EIO sing 111 n n 
C12 N07 EIO sing 112 n n 
N01 S02 EIO doub 113 n n 
N21 S02 EIO doub 114 n n 
O22 S02 EIO doub 115 n n 
C13 H1 EIO sing 116 n n 
C13 H2 EIO sing 117 n n 
C13 H3 EIO sing 118 n n 
C17 H4 EIO sing 119 n n 
C17 H5 EIO sing 120 n n 
C17 H6 EIO sing 121 n n 
C20 H7 EIO sing 122 n n 
C20 H8 EIO sing 123 n n 
C05 H9 EIO sing 124 n n 
C08 H10 EIO sing 125 n n 
C09 H11 EIO sing 126 n n 
C09 H12 EIO sing 127 n n 
C11 H13 EIO sing 128 n n 
C11 H14 EIO sing 129 n n 
C12 H15 EIO sing 130 n n 
C12 H16 EIO sing 131 n n 
C19 H17 EIO sing 132 n n 
C19 H18 EIO sing 133 n n 
N01 H19 EIO sing 134 n n 
N21 H21 EIO sing 135 n n 
#
_atom_sites.entry_id                     7T36 
_atom_sites.fract_transf_matrix[1][1]    0.022075 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.018417 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.008149 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 EIO A 1 1701 1701 EIO LIG . 
C 3 EDO A 1 1702 1801 EDO EDO . 
D 3 EDO A 1 1703 1901 EDO EDO . 
E 3 EDO A 1 1704 1902 EDO EDO . 
F 4 HOH A 1 1801 209 HOH HOH . 
F 4 HOH A 2 1802 188 HOH HOH . 
F 4 HOH A 3 1803 96 HOH HOH . 
F 4 HOH A 4 1804 74 HOH HOH . 
F 4 HOH A 5 1805 206 HOH HOH . 
F 4 HOH A 6 1806 211 HOH HOH . 
F 4 HOH A 7 1807 194 HOH HOH . 
F 4 HOH A 8 1808 94 HOH HOH . 
F 4 HOH A 9 1809 134 HOH HOH . 
F 4 HOH A 10 1810 24 HOH HOH . 
F 4 HOH A 11 1811 176 HOH HOH . 
F 4 HOH A 12 1812 29 HOH HOH . 
F 4 HOH A 13 1813 4 HOH HOH . 
F 4 HOH A 14 1814 56 HOH HOH . 
F 4 HOH A 15 1815 116 HOH HOH . 
F 4 HOH A 16 1816 178 HOH HOH . 
F 4 HOH A 17 1817 8 HOH HOH . 
F 4 HOH A 18 1818 103 HOH HOH . 
F 4 HOH A 19 1819 145 HOH HOH . 
F 4 HOH A 20 1820 80 HOH HOH . 
F 4 HOH A 21 1821 47 HOH HOH . 
F 4 HOH A 22 1822 83 HOH HOH . 
F 4 HOH A 23 1823 88 HOH HOH . 
F 4 HOH A 24 1824 31 HOH HOH . 
F 4 HOH A 25 1825 6 HOH HOH . 
F 4 HOH A 26 1826 57 HOH HOH . 
F 4 HOH A 27 1827 10 HOH HOH . 
F 4 HOH A 28 1828 64 HOH HOH . 
F 4 HOH A 29 1829 30 HOH HOH . 
F 4 HOH A 30 1830 25 HOH HOH . 
F 4 HOH A 31 1831 115 HOH HOH . 
F 4 HOH A 32 1832 43 HOH HOH . 
F 4 HOH A 33 1833 15 HOH HOH . 
F 4 HOH A 34 1834 157 HOH HOH . 
F 4 HOH A 35 1835 81 HOH HOH . 
F 4 HOH A 36 1836 100 HOH HOH . 
F 4 HOH A 37 1837 63 HOH HOH . 
F 4 HOH A 38 1838 18 HOH HOH . 
F 4 HOH A 39 1839 7 HOH HOH . 
F 4 HOH A 40 1840 48 HOH HOH . 
F 4 HOH A 41 1841 12 HOH HOH . 
F 4 HOH A 42 1842 58 HOH HOH . 
F 4 HOH A 43 1843 9 HOH HOH . 
F 4 HOH A 44 1844 154 HOH HOH . 
F 4 HOH A 45 1845 89 HOH HOH . 
F 4 HOH A 46 1846 3 HOH HOH . 
F 4 HOH A 47 1847 35 HOH HOH . 
F 4 HOH A 48 1848 20 HOH HOH . 
F 4 HOH A 49 1849 98 HOH HOH . 
F 4 HOH A 50 1850 28 HOH HOH . 
F 4 HOH A 51 1851 60 HOH HOH . 
F 4 HOH A 52 1852 11 HOH HOH . 
F 4 HOH A 53 1853 158 HOH HOH . 
F 4 HOH A 54 1854 186 HOH HOH . 
F 4 HOH A 55 1855 138 HOH HOH . 
F 4 HOH A 56 1856 36 HOH HOH . 
F 4 HOH A 57 1857 45 HOH HOH . 
F 4 HOH A 58 1858 46 HOH HOH . 
F 4 HOH A 59 1859 105 HOH HOH . 
F 4 HOH A 60 1860 76 HOH HOH . 
F 4 HOH A 61 1861 72 HOH HOH . 
F 4 HOH A 62 1862 26 HOH HOH . 
F 4 HOH A 63 1863 22 HOH HOH . 
F 4 HOH A 64 1864 16 HOH HOH . 
F 4 HOH A 65 1865 126 HOH HOH . 
F 4 HOH A 66 1866 124 HOH HOH . 
F 4 HOH A 67 1867 68 HOH HOH . 
F 4 HOH A 68 1868 181 HOH HOH . 
F 4 HOH A 69 1869 135 HOH HOH . 
F 4 HOH A 70 1870 14 HOH HOH . 
F 4 HOH A 71 1871 59 HOH HOH . 
F 4 HOH A 72 1872 112 HOH HOH . 
F 4 HOH A 73 1873 55 HOH HOH . 
F 4 HOH A 74 1874 33 HOH HOH . 
F 4 HOH A 75 1875 152 HOH HOH . 
F 4 HOH A 76 1876 87 HOH HOH . 
F 4 HOH A 77 1877 21 HOH HOH . 
F 4 HOH A 78 1878 133 HOH HOH . 
F 4 HOH A 79 1879 169 HOH HOH . 
F 4 HOH A 80 1880 82 HOH HOH . 
F 4 HOH A 81 1881 19 HOH HOH . 
F 4 HOH A 82 1882 38 HOH HOH . 
F 4 HOH A 83 1883 66 HOH HOH . 
F 4 HOH A 84 1884 111 HOH HOH . 
F 4 HOH A 85 1885 17 HOH HOH . 
F 4 HOH A 86 1886 73 HOH HOH . 
F 4 HOH A 87 1887 123 HOH HOH . 
F 4 HOH A 88 1888 189 HOH HOH . 
F 4 HOH A 89 1889 1 HOH HOH . 
F 4 HOH A 90 1890 40 HOH HOH . 
F 4 HOH A 91 1891 2 HOH HOH . 
F 4 HOH A 92 1892 204 HOH HOH . 
F 4 HOH A 93 1893 163 HOH HOH . 
F 4 HOH A 94 1894 92 HOH HOH . 
F 4 HOH A 95 1895 84 HOH HOH . 
F 4 HOH A 96 1896 167 HOH HOH . 
F 4 HOH A 97 1897 5 HOH HOH . 
F 4 HOH A 98 1898 107 HOH HOH . 
F 4 HOH A 99 1899 179 HOH HOH . 
F 4 HOH A 100 1900 162 HOH HOH . 
F 4 HOH A 101 1901 137 HOH HOH . 
F 4 HOH A 102 1902 79 HOH HOH . 
F 4 HOH A 103 1903 78 HOH HOH . 
F 4 HOH A 104 1904 52 HOH HOH . 
F 4 HOH A 105 1905 109 HOH HOH . 
F 4 HOH A 106 1906 195 HOH HOH . 
F 4 HOH A 107 1907 140 HOH HOH . 
F 4 HOH A 108 1908 166 HOH HOH . 
F 4 HOH A 109 1909 172 HOH HOH . 
F 4 HOH A 110 1910 50 HOH HOH . 
F 4 HOH A 111 1911 99 HOH HOH . 
F 4 HOH A 112 1912 61 HOH HOH . 
F 4 HOH A 113 1913 75 HOH HOH . 
F 4 HOH A 114 1914 104 HOH HOH . 
F 4 HOH A 115 1915 32 HOH HOH . 
F 4 HOH A 116 1916 37 HOH HOH . 
F 4 HOH A 117 1917 44 HOH HOH . 
F 4 HOH A 118 1918 67 HOH HOH . 
F 4 HOH A 119 1919 136 HOH HOH . 
F 4 HOH A 120 1920 91 HOH HOH . 
F 4 HOH A 121 1921 108 HOH HOH . 
F 4 HOH A 122 1922 85 HOH HOH . 
F 4 HOH A 123 1923 69 HOH HOH . 
F 4 HOH A 124 1924 13 HOH HOH . 
F 4 HOH A 125 1925 196 HOH HOH . 
F 4 HOH A 126 1926 77 HOH HOH . 
F 4 HOH A 127 1927 62 HOH HOH . 
F 4 HOH A 128 1928 54 HOH HOH . 
F 4 HOH A 129 1929 173 HOH HOH . 
F 4 HOH A 130 1930 125 HOH HOH . 
F 4 HOH A 131 1931 202 HOH HOH . 
F 4 HOH A 132 1932 147 HOH HOH . 
F 4 HOH A 133 1933 102 HOH HOH . 
F 4 HOH A 134 1934 101 HOH HOH . 
F 4 HOH A 135 1935 110 HOH HOH . 
F 4 HOH A 136 1936 34 HOH HOH . 
F 4 HOH A 137 1937 142 HOH HOH . 
F 4 HOH A 138 1938 93 HOH HOH . 
F 4 HOH A 139 1939 210 HOH HOH . 
F 4 HOH A 140 1940 51 HOH HOH . 
F 4 HOH A 141 1941 53 HOH HOH . 
F 4 HOH A 142 1942 121 HOH HOH . 
F 4 HOH A 143 1943 127 HOH HOH . 
F 4 HOH A 144 1944 41 HOH HOH . 
F 4 HOH A 145 1945 39 HOH HOH . 
F 4 HOH A 146 1946 161 HOH HOH . 
F 4 HOH A 147 1947 27 HOH HOH . 
F 4 HOH A 148 1948 71 HOH HOH . 
F 4 HOH A 149 1949 130 HOH HOH . 
F 4 HOH A 150 1950 90 HOH HOH . 
F 4 HOH A 151 1951 174 HOH HOH . 
F 4 HOH A 152 1952 23 HOH HOH . 
F 4 HOH A 153 1953 113 HOH HOH . 
F 4 HOH A 154 1954 160 HOH HOH . 
F 4 HOH A 155 1955 208 HOH HOH . 
F 4 HOH A 156 1956 171 HOH HOH . 
F 4 HOH A 157 1957 95 HOH HOH . 
F 4 HOH A 158 1958 143 HOH HOH . 
F 4 HOH A 159 1959 203 HOH HOH . 
F 4 HOH A 160 1960 106 HOH HOH . 
F 4 HOH A 161 1961 97 HOH HOH . 
F 4 HOH A 162 1962 193 HOH HOH . 
F 4 HOH A 163 1963 42 HOH HOH . 
F 4 HOH A 164 1964 131 HOH HOH . 
F 4 HOH A 165 1965 141 HOH HOH . 
F 4 HOH A 166 1966 177 HOH HOH . 
F 4 HOH A 167 1967 65 HOH HOH . 
F 4 HOH A 168 1968 132 HOH HOH . 
F 4 HOH A 169 1969 205 HOH HOH . 
F 4 HOH A 170 1970 159 HOH HOH . 
F 4 HOH A 171 1971 180 HOH HOH . 
F 4 HOH A 172 1972 153 HOH HOH . 
F 4 HOH A 173 1973 146 HOH HOH . 
F 4 HOH A 174 1974 184 HOH HOH . 
F 4 HOH A 175 1975 155 HOH HOH . 
F 4 HOH A 176 1976 187 HOH HOH . 
F 4 HOH A 177 1977 114 HOH HOH . 
F 4 HOH A 178 1978 170 HOH HOH . 
F 4 HOH A 179 1979 150 HOH HOH . 
F 4 HOH A 180 1980 70 HOH HOH . 
F 4 HOH A 181 1981 139 HOH HOH . 
F 4 HOH A 182 1982 117 HOH HOH . 
F 4 HOH A 183 1983 165 HOH HOH . 
F 4 HOH A 184 1984 119 HOH HOH . 
F 4 HOH A 185 1985 212 HOH HOH . 
F 4 HOH A 186 1986 185 HOH HOH . 
F 4 HOH A 187 1987 164 HOH HOH . 
F 4 HOH A 188 1988 149 HOH HOH . 
F 4 HOH A 189 1989 175 HOH HOH . 
F 4 HOH A 190 1990 151 HOH HOH . 
F 4 HOH A 191 1991 148 HOH HOH . 
F 4 HOH A 192 1992 156 HOH HOH . 
F 4 HOH A 193 1993 122 HOH HOH . 
F 4 HOH A 194 1994 129 HOH HOH . 
F 4 HOH A 195 1995 201 HOH HOH . 
F 4 HOH A 196 1996 118 HOH HOH . 
F 4 HOH A 197 1997 86 HOH HOH . 
F 4 HOH A 198 1998 197 HOH HOH . 
F 4 HOH A 199 1999 144 HOH HOH . 
F 4 HOH A 200 2000 192 HOH HOH . 
F 4 HOH A 201 2001 182 HOH HOH . 
F 4 HOH A 202 2002 198 HOH HOH . 
F 4 HOH A 203 2003 183 HOH HOH . 
F 4 HOH A 204 2004 200 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C13 EIO . . . B 2 -131.896 -171.237 114.162 1 24.31 ? C13 EIO 1701 A 1 
HETATM 2 C C15 EIO . . . B 2 -127.645 -171.124 115.81 1 20.46 ? C15 EIO 1701 A 1 
HETATM 3 C C17 EIO . . . B 2 -127.288 -172.032 113.028 1 28.35 ? C17 EIO 1701 A 1 
HETATM 4 C C20 EIO . . . B 2 -127.001 -170.863 120.391 1 28.14 ? C20 EIO 1701 A 1 
HETATM 5 C C03 EIO . . . B 2 -127.729 -170.017 119.345 1 21.95 ? C03 EIO 1701 A 1 
HETATM 6 C C04 EIO . . . B 2 -128.138 -170.605 117.981 1 20 ? C04 EIO 1701 A 1 
HETATM 7 C C05 EIO . . . B 2 -129.425 -171.121 117.812 1 19.17 ? C05 EIO 1701 A 1 
HETATM 8 C C06 EIO . . . B 2 -129.739 -171.632 116.552 1 19.15 ? C06 EIO 1701 A 1 
HETATM 9 C C08 EIO . . . B 2 -131.435 -172.516 114.883 1 23.97 ? C08 EIO 1701 A 1 
HETATM 10 C C09 EIO . . . B 2 -132.55 -173.567 114.836 1 23.08 ? C09 EIO 1701 A 1 
HETATM 11 C C11 EIO . . . B 2 -133.289 -173.007 116.966 1 20.87 ? C11 EIO 1701 A 1 
HETATM 12 C C12 EIO . . . B 2 -132.225 -171.909 117.108 1 19.04 ? C12 EIO 1701 A 1 
HETATM 13 C C19 EIO . . . B 2 -128.254 -170.08 120.781 1 28.77 ? C19 EIO 1701 A 1 
HETATM 14 N N01 EIO . . . B 2 -126.546 -167.429 120.199 1 39.88 ? N01 EIO 1701 A 1 
HETATM 15 N N07 EIO . . . B 2 -131.055 -172.199 116.268 1 17.79 ? N07 EIO 1701 A 1 
HETATM 16 N N14 EIO . . . B 2 -128.842 -171.625 115.581 1 22.03 ? N14 EIO 1701 A 1 
HETATM 17 N N18 EIO . . . B 2 -127.273 -170.614 116.977 1 22.33 ? N18 EIO 1701 A 1 
HETATM 18 N N21 EIO . . . B 2 -125.616 -168.33 118.116 1 39.81 ? N21 EIO 1701 A 1 
HETATM 19 O O10 EIO . . . B 2 -133.626 -173.184 115.628 1 21.04 ? O10 EIO 1701 A 1 
HETATM 20 O O22 EIO . . . B 2 -127.2 -167.598 117.923 1 28.07 ? O22 EIO 1701 A 1 
HETATM 21 S S02 EIO . . . B 2 -126.832 -168.441 119.065 1 33.88 ? S02 EIO 1701 A 1 
HETATM 22 S S16 EIO . . . B 2 -126.488 -171.154 114.417 1 28.51 ? S16 EIO 1701 A 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           13 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           309 
_model_server_stats.encode_time_ms          28 
_model_server_stats.element_count           22 
#