data_7T3A
#
_model_server_result.job_id            NZcrSyQkiOUKeXIffS-xKw 
_model_server_result.datetime_utc      '2025-03-05 22:04:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          7t3a 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"K","auth_seq_id":500}' 
#
_entry.id    7T3A 
#
_exptl.entry_id    7T3A 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              522.196 
_entity.id                          11 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            7T3A 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 7T3A 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    decameric 
_pdbx_struct_assembly.oligomeric_count      10 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      11 
_struct_asym.id                             K 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_struct_conn.conn_type_id                   disulf 
_struct_conn.details                        ? 
_struct_conn.id                             disulf1 
_struct_conn.ptnr1_label_asym_id            D 
_struct_conn.ptnr1_label_atom_id            SG 
_struct_conn.ptnr1_label_comp_id            CYS 
_struct_conn.ptnr1_label_seq_id             124 
_struct_conn.ptnr1_auth_asym_id             K 
_struct_conn.ptnr1_auth_comp_id             CYS 
_struct_conn.ptnr1_auth_seq_id              124 
_struct_conn.ptnr1_symmetry                 1_555 
_struct_conn.ptnr2_label_asym_id            D 
_struct_conn.ptnr2_label_atom_id            SG 
_struct_conn.ptnr2_label_comp_id            CYS 
_struct_conn.ptnr2_label_seq_id             159 
_struct_conn.ptnr2_auth_asym_id             K 
_struct_conn.ptnr2_auth_comp_id             CYS 
_struct_conn.ptnr2_auth_seq_id              159 
_struct_conn.ptnr2_symmetry                 1_555 
_struct_conn.pdbx_ptnr1_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr1_label_alt_id        ? 
_struct_conn.pdbx_ptnr1_standard_comp_id    ? 
_struct_conn.pdbx_ptnr2_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr2_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_PDB_ins_code        ? 
_struct_conn.pdbx_ptnr3_label_alt_id        ? 
_struct_conn.pdbx_ptnr3_label_asym_id       ? 
_struct_conn.pdbx_ptnr3_label_atom_id       ? 
_struct_conn.pdbx_ptnr3_label_comp_id       ? 
_struct_conn.pdbx_ptnr3_label_seq_id        ? 
_struct_conn.pdbx_PDB_id                    ? 
_struct_conn.pdbx_dist_value                2.045 
_struct_conn.pdbx_value_order               ? 
#
_chem_comp.formula           'C10 H17 N6 O13 P3' 
_chem_comp.formula_weight    522.196 
_chem_comp.id                GNP 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
PG O1G GNP doub 129 n n 
PG O2G GNP sing 130 n n 
PG O3G GNP sing 131 n n 
PG N3B GNP sing 132 n n 
O2G HOG2 GNP sing 133 n n 
O3G HOG3 GNP sing 134 n n 
N3B PB GNP sing 135 n n 
N3B HNB3 GNP sing 136 n n 
PB O1B GNP doub 137 n n 
PB O2B GNP sing 138 n n 
PB O3A GNP sing 139 n n 
O2B HOB2 GNP sing 140 n n 
O3A PA GNP sing 141 n n 
PA O1A GNP doub 142 n n 
PA O2A GNP sing 143 n n 
PA O5' GNP sing 144 n n 
O2A HOA2 GNP sing 145 n n 
O5' C5' GNP sing 146 n n 
C5' C4' GNP sing 147 n n 
C5' "H5'2" GNP sing 148 n n 
C5' "H5'1" GNP sing 149 n n 
C4' O4' GNP sing 150 n n 
C4' C3' GNP sing 151 n n 
C4' H4' GNP sing 152 n n 
O4' C1' GNP sing 153 n n 
C3' O3' GNP sing 154 n n 
C3' C2' GNP sing 155 n n 
C3' H3' GNP sing 156 n n 
O3' HO3' GNP sing 157 n n 
C2' O2' GNP sing 158 n n 
C2' C1' GNP sing 159 n n 
C2' H2' GNP sing 160 n n 
O2' HO2' GNP sing 161 n n 
C1' N9 GNP sing 162 n n 
C1' H1' GNP sing 163 n n 
N9 C8 GNP sing 164 n y 
N9 C4 GNP sing 165 n y 
C8 N7 GNP doub 166 n y 
C8 H8 GNP sing 167 n n 
N7 C5 GNP sing 168 n y 
C5 C6 GNP sing 169 n y 
C5 C4 GNP doub 170 n y 
C6 O6 GNP doub 171 n n 
C6 N1 GNP sing 172 n y 
N1 C2 GNP sing 173 n y 
N1 HN1 GNP sing 174 n n 
C2 N2 GNP sing 175 n n 
C2 N3 GNP doub 176 n y 
N2 HN21 GNP sing 177 n n 
N2 HN22 GNP sing 178 n n 
N3 C4 GNP sing 179 n y 
#
_atom_sites.entry_id                     7T3A 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
_pdbx_nonpoly_scheme.asym_id          K 
_pdbx_nonpoly_scheme.entity_id        11 
_pdbx_nonpoly_scheme.mon_id           GNP 
_pdbx_nonpoly_scheme.pdb_strand_id    K 
_pdbx_nonpoly_scheme.ndb_seq_num      1 
_pdbx_nonpoly_scheme.pdb_seq_num      500 
_pdbx_nonpoly_scheme.auth_seq_num     500 
_pdbx_nonpoly_scheme.pdb_mon_id       GNP 
_pdbx_nonpoly_scheme.auth_mon_id      GNP 
_pdbx_nonpoly_scheme.pdb_ins_code     . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 P PG GNP . . . K 11 120.619 134.444 162.07 1 118.04 ? PG GNP 500 K 1 
HETATM 2 O O1G GNP . . . K 11 121.115 133.107 162.536 1 118.04 ? O1G GNP 500 K 1 
HETATM 3 O O2G GNP . . . K 11 121.562 135.019 161.011 1 118.04 ? O2G GNP 500 K 1 
HETATM 4 O O3G GNP . . . K 11 119.187 134.303 161.492 1 118.04 ? O3G GNP 500 K 1 
HETATM 5 N N3B GNP . . . K 11 120.556 135.461 163.434 1 118.04 ? N3B GNP 500 K 1 
HETATM 6 P PB GNP . . . K 11 121.774 135.388 164.516 1 118.04 ? PB GNP 500 K 1 
HETATM 7 O O1B GNP . . . K 11 123.026 134.924 163.832 1 118.04 ? O1B GNP 500 K 1 
HETATM 8 O O2B GNP . . . K 11 121.429 134.38 165.573 1 118.04 ? O2B GNP 500 K 1 
HETATM 9 O O3A GNP . . . K 11 121.982 136.883 165.146 1 118.04 ? O3A GNP 500 K 1 
HETATM 10 P PA GNP . . . K 11 121.415 137.301 166.56 1 118.04 ? PA GNP 500 K 1 
HETATM 11 O O1A GNP . . . K 11 122.56 137.109 167.549 1 118.04 ? O1A GNP 500 K 1 
HETATM 12 O O2A GNP . . . K 11 120.17 136.595 166.878 1 118.04 ? O2A GNP 500 K 1 
HETATM 13 O O5' GNP . . . K 11 121.05 138.817 166.375 1 118.04 ? O5' GNP 500 K 1 
HETATM 14 C C5' GNP . . . K 11 119.676 139.237 166.247 1 118.04 ? C5' GNP 500 K 1 
HETATM 15 C C4' GNP . . . K 11 119.568 140.729 166.427 1 118.04 ? C4' GNP 500 K 1 
HETATM 16 O O4' GNP . . . K 11 118.566 141.029 167.417 1 118.04 ? O4' GNP 500 K 1 
HETATM 17 C C3' GNP . . . K 11 120.816 141.424 166.945 1 118.04 ? C3' GNP 500 K 1 
HETATM 18 O O3' GNP . . . K 11 121.715 141.676 165.874 1 118.04 ? O3' GNP 500 K 1 
HETATM 19 C C2' GNP . . . K 11 120.244 142.722 167.515 1 118.04 ? C2' GNP 500 K 1 
HETATM 20 O O2' GNP . . . K 11 120.105 143.714 166.508 1 118.04 ? O2' GNP 500 K 1 
HETATM 21 C C1' GNP . . . K 11 118.862 142.281 168.017 1 118.04 ? C1' GNP 500 K 1 
HETATM 22 N N9 GNP . . . K 11 118.803 142.121 169.476 1 118.04 ? N9 GNP 500 K 1 
HETATM 23 C C8 GNP . . . K 11 119.08 140.988 170.185 1 118.04 ? C8 GNP 500 K 1 
HETATM 24 N N7 GNP . . . K 11 118.978 141.157 171.48 1 118.04 ? N7 GNP 500 K 1 
HETATM 25 C C5 GNP . . . K 11 118.564 142.468 171.623 1 118.04 ? C5 GNP 500 K 1 
HETATM 26 C C6 GNP . . . K 11 118.223 143.228 172.801 1 118.04 ? C6 GNP 500 K 1 
HETATM 27 O O6 GNP . . . K 11 118.257 142.854 173.967 1 118.04 ? O6 GNP 500 K 1 
HETATM 28 N N1 GNP . . . K 11 117.843 144.518 172.489 1 118.04 ? N1 GNP 500 K 1 
HETATM 29 C C2 GNP . . . K 11 117.774 145.031 171.223 1 118.04 ? C2 GNP 500 K 1 
HETATM 30 N N2 GNP . . . K 11 117.382 146.298 171.108 1 118.04 ? N2 GNP 500 K 1 
HETATM 31 N N3 GNP . . . K 11 118.07 144.332 170.129 1 118.04 ? N3 GNP 500 K 1 
HETATM 32 C C4 GNP . . . K 11 118.455 143.073 170.401 1 118.04 ? C4 GNP 500 K 1 
#
_model_server_stats.io_time_ms              13 
_model_server_stats.parse_time_ms           20 
_model_server_stats.create_model_time_ms    18 
_model_server_stats.query_time_ms           212 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           32 
#