data_7T3P # _model_server_result.job_id B73RMdgS_qcJ5zglQWx2ig _model_server_result.datetime_utc '2024-10-19 03:45:07' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t3p # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"G","auth_seq_id":2703}' # _entry.id 7T3P # _exptl.entry_id 7T3P _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 507.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "ADENOSINE-5'-TRIPHOSPHATE" _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T3P _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T3P _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 J N N ? 4 M N N ? 4 P N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 2455 A CYS 2455 1_555 A SG CYS 2461 A CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf2 B SG CYS 2455 B CYS 2455 1_555 B SG CYS 2461 B CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? disulf ? disulf3 C SG CYS 2455 C CYS 2455 1_555 C SG CYS 2461 C CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.028 ? disulf ? disulf4 D SG CYS 2455 D CYS 2455 1_555 D SG CYS 2461 D CYS 2461 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.029 ? metalc ? metalc1 A SG CYS 2538 A CYS 2538 1_555 E ZN ZN . A ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc2 A SG CYS 2541 A CYS 2541 1_555 E ZN ZN . A ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc3 A NE2 HIS 2558 A HIS 2558 1_555 E ZN ZN . A ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc4 A ND1 HIS 2563 A HIS 2563 1_555 E ZN ZN . A ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc5 B SG CYS 2538 B CYS 2538 1_555 H ZN ZN . B ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc6 B SG CYS 2541 B CYS 2541 1_555 H ZN ZN . B ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc7 B NE2 HIS 2558 B HIS 2558 1_555 H ZN ZN . B ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc8 B ND1 HIS 2563 B HIS 2563 1_555 H ZN ZN . B ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc9 C SG CYS 2538 C CYS 2538 1_555 K ZN ZN . C ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc10 C SG CYS 2541 C CYS 2541 1_555 K ZN ZN . C ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc11 C NE2 HIS 2558 C HIS 2558 1_555 K ZN ZN . C ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc12 C ND1 HIS 2563 C HIS 2563 1_555 K ZN ZN . C ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? metalc ? metalc13 D SG CYS 2538 D CYS 2538 1_555 N ZN ZN . D ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.291 ? metalc ? metalc14 D SG CYS 2541 D CYS 2541 1_555 N ZN ZN . D ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc15 D NE2 HIS 2558 D HIS 2558 1_555 N ZN ZN . D ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? metalc ? metalc16 D ND1 HIS 2563 D HIS 2563 1_555 N ZN ZN . D ZN 2701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C10 H16 N5 O13 P3' _chem_comp.formula_weight 507.181 _chem_comp.id ATP _chem_comp.mon_nstd_flag . _chem_comp.name "ADENOSINE-5'-TRIPHOSPHATE" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7T3P _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 ZN A 1 2701 4000 ZN ZN . F 3 I3P A 1 2702 4201 I3P I3P . G 4 ATP A 1 2703 4301 ATP ATP . H 2 ZN B 1 2701 4000 ZN ZN . I 3 I3P B 1 2702 4201 I3P I3P . J 4 ATP B 1 2703 4301 ATP ATP . K 2 ZN C 1 2701 4000 ZN ZN . L 3 I3P C 1 2702 4201 I3P I3P . M 4 ATP C 1 2703 4301 ATP ATP . N 2 ZN D 1 2701 4000 ZN ZN . O 3 I3P D 1 2702 4201 I3P I3P . P 4 ATP D 1 2703 4301 ATP ATP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 P PG ATP . . . G 4 175.736 218.941 232.08 1 34.85 ? PG ATP 2703 A 1 HETATM 2 O O1G ATP . . . G 4 176.652 218.591 233.201 1 34.85 ? O1G ATP 2703 A 1 HETATM 3 O O2G ATP . . . G 4 175.941 218.087 230.826 1 34.85 ? O2G ATP 2703 A 1 HETATM 4 O O3G ATP . . . G 4 175.782 220.42 231.686 1 34.85 ? O3G ATP 2703 A 1 HETATM 5 P PB ATP . . . G 4 172.764 218.731 231.863 1 34.85 ? PB ATP 2703 A 1 HETATM 6 O O1B ATP . . . G 4 172.422 220.077 231.366 1 34.85 ? O1B ATP 2703 A 1 HETATM 7 O O2B ATP . . . G 4 171.805 218.136 232.891 1 34.85 ? O2B ATP 2703 A 1 HETATM 8 O O3B ATP . . . G 4 174.217 218.684 232.495 1 34.85 ? O3B ATP 2703 A 1 HETATM 9 P PA ATP . . . G 4 172.886 216.108 230.513 1 34.85 ? PA ATP 2703 A 1 HETATM 10 O O1A ATP . . . G 4 173.224 215.712 229.132 1 34.85 ? O1A ATP 2703 A 1 HETATM 11 O O2A ATP . . . G 4 171.54 215.613 231.022 1 34.85 ? O2A ATP 2703 A 1 HETATM 12 O O3A ATP . . . G 4 172.892 217.682 230.672 1 34.85 ? O3A ATP 2703 A 1 HETATM 13 O O5' ATP . . . G 4 174.004 215.648 231.527 1 34.85 ? O5' ATP 2703 A 1 HETATM 14 C C5' ATP . . . G 4 174.165 214.261 231.888 1 34.85 ? C5' ATP 2703 A 1 HETATM 15 C C4' ATP . . . G 4 175.377 214.112 232.77 1 34.85 ? C4' ATP 2703 A 1 HETATM 16 O O4' ATP . . . G 4 175.979 212.841 232.435 1 34.85 ? O4' ATP 2703 A 1 HETATM 17 C C3' ATP . . . G 4 176.453 215.12 232.393 1 34.85 ? C3' ATP 2703 A 1 HETATM 18 O O3' ATP . . . G 4 177.455 214.999 233.393 1 34.85 ? O3' ATP 2703 A 1 HETATM 19 C C2' ATP . . . G 4 177.045 214.472 231.15 1 34.85 ? C2' ATP 2703 A 1 HETATM 20 O O2' ATP . . . G 4 178.39 214.917 231.068 1 34.85 ? O2' ATP 2703 A 1 HETATM 21 C C1' ATP . . . G 4 177.138 213.032 231.643 1 34.85 ? C1' ATP 2703 A 1 HETATM 22 N N9 ATP . . . G 4 177.055 212.09 230.537 1 34.85 ? N9 ATP 2703 A 1 HETATM 23 C C8 ATP . . . G 4 176.045 211.977 229.623 1 34.85 ? C8 ATP 2703 A 1 HETATM 24 N N7 ATP . . . G 4 176.242 211.05 228.721 1 34.85 ? N7 ATP 2703 A 1 HETATM 25 C C5 ATP . . . G 4 177.47 210.512 229.068 1 34.85 ? C5 ATP 2703 A 1 HETATM 26 C C6 ATP . . . G 4 178.249 209.486 228.505 1 34.85 ? C6 ATP 2703 A 1 HETATM 27 N N6 ATP . . . G 4 177.888 208.783 227.429 1 34.85 ? N6 ATP 2703 A 1 HETATM 28 N N1 ATP . . . G 4 179.428 209.204 229.091 1 34.85 ? N1 ATP 2703 A 1 HETATM 29 C C2 ATP . . . G 4 179.795 209.901 230.166 1 34.85 ? C2 ATP 2703 A 1 HETATM 30 N N3 ATP . . . G 4 179.148 210.889 230.782 1 34.85 ? N3 ATP 2703 A 1 HETATM 31 C C4 ATP . . . G 4 177.984 211.147 230.182 1 34.85 ? C4 ATP 2703 A 1 # _model_server_stats.io_time_ms 29 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 87 _model_server_stats.query_time_ms 308 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 31 #