data_7T3S # _model_server_result.job_id hVBCEbzxuIoIFD2ndxK7Ag _model_server_result.datetime_utc '2024-11-27 16:47:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t3s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":1004}' # _entry.id 7T3S # _exptl.entry_id 7T3S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 22.99 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SODIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T3S _cell.length_a 41.827 _cell.length_b 56.194 _cell.length_c 93.853 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T3S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 4 A ASN 749 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc2 A O ASN 6 A ASN 751 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.278 ? metalc ? metalc3 A OE2 GLU 21 A GLU 766 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc4 A OE1 GLU 21 A GLU 766 1_555 E NA NA . A NA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.943 ? metalc ? metalc5 A OD1 ASP 36 A ASP 781 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.962 ? metalc ? metalc6 A OD2 ASP 36 A ASP 781 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.318 ? metalc ? metalc7 A OD2 ASP 38 A ASP 783 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.432 ? metalc ? metalc8 A O ASN 42 A ASN 787 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.207 ? metalc ? metalc9 A OD1 ASP 73 A ASP 818 1_555 E NA NA . A NA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.341 ? metalc ? metalc10 A OE1 GLU 75 A GLU 820 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc11 A OE2 GLU 75 A GLU 820 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.051 ? metalc ? metalc12 A OE1 GLU 75 A GLU 820 1_555 E NA NA . A NA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.487 ? metalc ? metalc13 A OD2 ASP 94 A ASP 839 1_555 B CA CA . A CA 1001 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.469 ? metalc ? metalc14 A OD1 ASP 114 A ASP 859 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.335 ? metalc ? metalc15 A O LEU 115 A LEU 860 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? metalc ? metalc16 A OD1 ASN 116 A ASN 861 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.146 ? metalc ? metalc17 A OD1 ASP 117 A ASP 862 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.36 ? metalc ? metalc18 A OD1 ASP 117 A ASP 862 1_555 E NA NA . A NA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.951 ? metalc ? metalc19 A OD2 ASP 117 A ASP 862 1_555 E NA NA . A NA 1004 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.302 ? metalc ? metalc20 A O ASN 118 A ASN 863 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.352 ? metalc ? metalc21 A OD1 ASP 148 A ASP 893 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.894 ? metalc ? metalc22 A OD2 ASP 148 A ASP 893 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.381 ? metalc ? metalc23 A OD2 ASP 150 A ASP 895 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.443 ? metalc ? metalc24 A OD1 ASP 150 A ASP 895 1_555 D CA CA . A CA 1003 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.564 ? metalc ? metalc25 A O ASN 154 A ASN 899 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.536 ? metalc ? metalc26 A OD2 ASP 201 A ASP 946 1_555 C CA CA . A CA 1002 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.349 ? # _chem_comp.formula 'Na 1' _chem_comp.formula_weight 22.99 _chem_comp.id NA _chem_comp.mon_nstd_flag . _chem_comp.name 'SODIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 7T3S _atom_sites.fract_transf_matrix[1][1] 0.023908 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017795 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010655 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CA A 1 1001 1 CA CA . C 2 CA A 1 1002 2 CA CA . D 2 CA A 1 1003 3 CA CA . E 3 NA A 1 1004 1 NA NA . F 4 HOH A 1 1101 2 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol NA _atom_site.label_atom_id NA _atom_site.label_comp_id NA _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id E _atom_site.label_entity_id 3 _atom_site.Cartn_x 19.32 _atom_site.Cartn_y -6.047 _atom_site.Cartn_z 10.362 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 44.51 _atom_site.pdbx_formal_charge 0 _atom_site.auth_atom_id NA _atom_site.auth_comp_id NA _atom_site.auth_seq_id 1004 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 11 _model_server_stats.query_time_ms 314 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #