data_7T4J # _model_server_result.job_id iNdBQ2nWlIyPB6suXSRoVQ _model_server_result.datetime_utc '2024-12-01 15:01:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":1101}' # _entry.id 7T4J # _exptl.entry_id 7T4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 587.712 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'propan-2-yl 2-[[4-[2-(dimethylamino)ethyl-methyl-amino]-2-methoxy-5-(propanoylamino)phenyl]amino]-4-(1-methylindol-3-yl)pyrimidine-5-carboxylate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T4J _cell.length_a 58.121 _cell.length_b 85.531 _cell.length_c 127.854 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 106 A CYS 800 1_555 C C20 R28 . A R28 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale2 B SG CYS 106 B CYS 800 1_555 E C20 R28 . B R28 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? # _chem_comp.formula 'C32 H41 N7 O4' _chem_comp.formula_weight 587.712 _chem_comp.id R28 _chem_comp.mon_nstd_flag . _chem_comp.name 'propan-2-yl 2-[[4-[2-(dimethylamino)ethyl-methyl-amino]-2-methoxy-5-(propanoylamino)phenyl]amino]-4-(1-methylindol-3-yl)pyrimidine-5-carboxylate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'Mobocertinib, bound form' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C41 C39 R28 sing 306 n n C39 C40 R28 sing 307 n n C39 O38 R28 sing 308 n n O38 C37 R28 sing 309 n n C06 C07 R28 doub 310 n y C06 C05 R28 sing 311 n y C24 N23 R28 sing 312 n n C33 O32 R28 sing 313 n n C07 C08 R28 sing 314 n y C05 C04 R28 doub 315 n y O32 C31 R28 sing 316 n n C37 C36 R28 sing 317 n n C37 O42 R28 doub 318 n n C08 C03 R28 doub 319 n y C04 C03 R28 sing 320 n y C04 C09 R28 sing 321 n y C30 C31 R28 doub 322 n y C30 C22 R28 sing 323 n y C36 C35 R28 doub 324 n y C36 C10 R28 sing 325 n y C03 N02 R28 sing 326 n y C35 N34 R28 sing 327 n y C31 C14 R28 sing 328 n y C09 C10 R28 sing 329 n n C09 C43 R28 doub 330 n y C10 N11 R28 doub 331 n y N23 C22 R28 sing 332 n n N23 C25 R28 sing 333 n n N34 C12 R28 doub 334 n y N02 C43 R28 sing 335 n y N02 C01 R28 sing 336 n n C22 C16 R28 doub 337 n y N11 C12 R28 sing 338 n y C12 N13 R28 sing 339 n n C14 N13 R28 sing 340 n n C14 C15 R28 doub 341 n y C16 C15 R28 sing 342 n y C16 N17 R28 sing 343 n n C25 C26 R28 sing 344 n n C26 N27 R28 sing 345 n n N17 C18 R28 sing 346 n n N27 C28 R28 sing 347 n n N27 C29 R28 sing 348 n n C18 O21 R28 doub 349 n n C18 C19 R28 sing 350 n n C19 C20 R28 sing 351 n n C15 H1 R28 sing 352 n n C20 H2 R28 sing 353 n n C20 H3 R28 sing 354 n n C20 H4 R28 sing 355 n n C24 H5 R28 sing 356 n n C24 H6 R28 sing 357 n n C24 H7 R28 sing 358 n n C26 H8 R28 sing 359 n n C26 H9 R28 sing 360 n n C28 H10 R28 sing 361 n n C28 H11 R28 sing 362 n n C28 H12 R28 sing 363 n n C01 H13 R28 sing 364 n n C01 H14 R28 sing 365 n n C01 H15 R28 sing 366 n n C05 H16 R28 sing 367 n n C06 H17 R28 sing 368 n n C07 H18 R28 sing 369 n n C08 H19 R28 sing 370 n n C19 H20 R28 sing 371 n n C19 H21 R28 sing 372 n n C25 H22 R28 sing 373 n n C25 H23 R28 sing 374 n n C29 H24 R28 sing 375 n n C29 H25 R28 sing 376 n n C29 H26 R28 sing 377 n n C30 H27 R28 sing 378 n n C33 H28 R28 sing 379 n n C33 H29 R28 sing 380 n n C33 H30 R28 sing 381 n n C35 H31 R28 sing 382 n n C39 H32 R28 sing 383 n n C40 H33 R28 sing 384 n n C40 H34 R28 sing 385 n n C40 H35 R28 sing 386 n n C41 H36 R28 sing 387 n n C41 H37 R28 sing 388 n n C41 H38 R28 sing 389 n n C43 H39 R28 sing 390 n n N13 H40 R28 sing 391 n n N17 H41 R28 sing 392 n n # _atom_sites.entry_id 7T4J _atom_sites.fract_transf_matrix[1][1] 0.017205 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007821 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R28 A 1 1101 2500 R28 LIG . D 3 EDO A 1 1102 2601 EDO EDO . E 2 R28 B 1 1101 2500 R28 LIG . F 4 CIT B 1 1102 2601 CIT CIT . G 4 CIT B 1 1103 2701 CIT CIT . H 5 HOH A 1 1201 71 HOH HOH . H 5 HOH A 2 1202 42 HOH HOH . H 5 HOH A 3 1203 1 HOH HOH . H 5 HOH A 4 1204 73 HOH HOH . H 5 HOH A 5 1205 5 HOH HOH . H 5 HOH A 6 1206 107 HOH HOH . H 5 HOH A 7 1207 61 HOH HOH . H 5 HOH A 8 1208 68 HOH HOH . H 5 HOH A 9 1209 58 HOH HOH . H 5 HOH A 10 1210 77 HOH HOH . H 5 HOH A 11 1211 36 HOH HOH . H 5 HOH A 12 1212 76 HOH HOH . H 5 HOH A 13 1213 78 HOH HOH . H 5 HOH A 14 1214 82 HOH HOH . H 5 HOH A 15 1215 46 HOH HOH . H 5 HOH A 16 1216 17 HOH HOH . H 5 HOH A 17 1217 39 HOH HOH . H 5 HOH A 18 1218 66 HOH HOH . H 5 HOH A 19 1219 35 HOH HOH . H 5 HOH A 20 1220 59 HOH HOH . H 5 HOH A 21 1221 60 HOH HOH . H 5 HOH A 22 1222 32 HOH HOH . H 5 HOH A 23 1223 25 HOH HOH . H 5 HOH A 24 1224 74 HOH HOH . H 5 HOH A 25 1225 72 HOH HOH . H 5 HOH A 26 1226 3 HOH HOH . H 5 HOH A 27 1227 101 HOH HOH . H 5 HOH A 28 1228 69 HOH HOH . H 5 HOH A 29 1229 81 HOH HOH . H 5 HOH A 30 1230 19 HOH HOH . H 5 HOH A 31 1231 84 HOH HOH . H 5 HOH A 32 1232 38 HOH HOH . H 5 HOH A 33 1233 43 HOH HOH . H 5 HOH A 34 1234 20 HOH HOH . H 5 HOH A 35 1235 85 HOH HOH . H 5 HOH A 36 1236 87 HOH HOH . H 5 HOH A 37 1237 70 HOH HOH . H 5 HOH A 38 1238 109 HOH HOH . H 5 HOH A 39 1239 12 HOH HOH . H 5 HOH A 40 1240 29 HOH HOH . H 5 HOH A 41 1241 26 HOH HOH . H 5 HOH A 42 1242 18 HOH HOH . H 5 HOH A 43 1243 83 HOH HOH . H 5 HOH A 44 1244 31 HOH HOH . H 5 HOH A 45 1245 80 HOH HOH . H 5 HOH A 46 1246 62 HOH HOH . H 5 HOH A 47 1247 67 HOH HOH . H 5 HOH A 48 1248 75 HOH HOH . H 5 HOH A 49 1249 79 HOH HOH . H 5 HOH A 50 1250 86 HOH HOH . I 5 HOH B 1 1201 102 HOH HOH . I 5 HOH B 2 1202 52 HOH HOH . I 5 HOH B 3 1203 104 HOH HOH . I 5 HOH B 4 1204 105 HOH HOH . I 5 HOH B 5 1205 44 HOH HOH . I 5 HOH B 6 1206 106 HOH HOH . I 5 HOH B 7 1207 40 HOH HOH . I 5 HOH B 8 1208 92 HOH HOH . I 5 HOH B 9 1209 110 HOH HOH . I 5 HOH B 10 1210 50 HOH HOH . I 5 HOH B 11 1211 54 HOH HOH . I 5 HOH B 12 1212 90 HOH HOH . I 5 HOH B 13 1213 2 HOH HOH . I 5 HOH B 14 1214 108 HOH HOH . I 5 HOH B 15 1215 53 HOH HOH . I 5 HOH B 16 1216 51 HOH HOH . I 5 HOH B 17 1217 37 HOH HOH . I 5 HOH B 18 1218 57 HOH HOH . I 5 HOH B 19 1219 47 HOH HOH . I 5 HOH B 20 1220 89 HOH HOH . I 5 HOH B 21 1221 93 HOH HOH . I 5 HOH B 22 1222 103 HOH HOH . I 5 HOH B 23 1223 65 HOH HOH . I 5 HOH B 24 1224 4 HOH HOH . I 5 HOH B 25 1225 23 HOH HOH . I 5 HOH B 26 1226 64 HOH HOH . I 5 HOH B 27 1227 97 HOH HOH . I 5 HOH B 28 1228 55 HOH HOH . I 5 HOH B 29 1229 63 HOH HOH . I 5 HOH B 30 1230 48 HOH HOH . I 5 HOH B 31 1231 95 HOH HOH . I 5 HOH B 32 1232 24 HOH HOH . I 5 HOH B 33 1233 45 HOH HOH . I 5 HOH B 34 1234 100 HOH HOH . I 5 HOH B 35 1235 96 HOH HOH . I 5 HOH B 36 1236 91 HOH HOH . I 5 HOH B 37 1237 14 HOH HOH . I 5 HOH B 38 1238 15 HOH HOH . I 5 HOH B 39 1239 41 HOH HOH . I 5 HOH B 40 1240 94 HOH HOH . I 5 HOH B 41 1241 49 HOH HOH . I 5 HOH B 42 1242 99 HOH HOH . I 5 HOH B 43 1243 88 HOH HOH . I 5 HOH B 44 1244 98 HOH HOH . I 5 HOH B 45 1245 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 R28 . . . C 2 3.836 -46.722 19.251 1 55.76 ? C10 R28 1101 A 1 HETATM 2 C C15 R28 . . . C 2 7.766 -45.041 20.059 1 67.15 ? C15 R28 1101 A 1 HETATM 3 C C20 R28 . . . C 2 6.827 -40.362 22.358 1 69.78 ? C20 R28 1101 A 1 HETATM 4 C C22 R28 . . . C 2 9.927 -45.041 21.099 1 75.77 ? C22 R28 1101 A 1 HETATM 5 C C24 R28 . . . C 2 12.288 -45.145 21.704 1 83.86 ? C24 R28 1101 A 1 HETATM 6 C C26 R28 . . . C 2 11.269 -42.678 23.535 1 95.6 ? C26 R28 1101 A 1 HETATM 7 C C28 R28 . . . C 2 13.296 -41.496 23.011 1 90.73 ? C28 R28 1101 A 1 HETATM 8 C C01 R28 . . . C 2 0.271 -44.962 22.21 1 58.12 ? C01 R28 1101 A 1 HETATM 9 C C03 R28 . . . C 2 2.736 -45.369 22.472 1 59.63 ? C03 R28 1101 A 1 HETATM 10 C C04 R28 . . . C 2 3.756 -45.842 21.67 1 58.16 ? C04 R28 1101 A 1 HETATM 11 C C05 R28 . . . C 2 5.034 -45.898 22.197 1 59.36 ? C05 R28 1101 A 1 HETATM 12 C C06 R28 . . . C 2 5.262 -45.506 23.5 1 60.07 ? C06 R28 1101 A 1 HETATM 13 C C07 R28 . . . C 2 4.228 -45.03 24.276 1 61.28 ? C07 R28 1101 A 1 HETATM 14 C C08 R28 . . . C 2 2.949 -44.945 23.769 1 61.42 ? C08 R28 1101 A 1 HETATM 15 C C09 R28 . . . C 2 3.187 -46.202 20.423 1 57.01 ? C09 R28 1101 A 1 HETATM 16 C C12 R28 . . . C 2 5.889 -46.836 18.246 1 56.54 ? C12 R28 1101 A 1 HETATM 17 C C14 R28 . . . C 2 8.107 -46.09 19.227 1 65.13 ? C14 R28 1101 A 1 HETATM 18 C C16 R28 . . . C 2 8.646 -44.495 20.982 1 71.24 ? C16 R28 1101 A 1 HETATM 19 C C18 R28 . . . C 2 7.129 -42.578 21.742 1 64.37 ? C18 R28 1101 A 1 HETATM 20 C C19 R28 . . . C 2 7.188 -41.575 22.816 1 68.83 ? C19 R28 1101 A 1 HETATM 21 C C25 R28 . . . C 2 10.748 -44.126 23.353 1 86.14 ? C25 R28 1101 A 1 HETATM 22 C C29 R28 . . . C 2 11.432 -41.307 21.565 1 88.98 ? C29 R28 1101 A 1 HETATM 23 C C30 R28 . . . C 2 10.251 -46.094 20.254 1 72.57 ? C30 R28 1101 A 1 HETATM 24 C C31 R28 . . . C 2 9.372 -46.617 19.324 1 69.32 ? C31 R28 1101 A 1 HETATM 25 C C33 R28 . . . C 2 11.018 -48.099 18.551 1 66.52 ? C33 R28 1101 A 1 HETATM 26 C C35 R28 . . . C 2 4.08 -47.584 17.099 1 55.74 ? C35 R28 1101 A 1 HETATM 27 C C36 R28 . . . C 2 3.244 -47.265 18.133 1 55.46 ? C36 R28 1101 A 1 HETATM 28 C C37 R28 . . . C 2 1.805 -47.539 17.937 1 56.53 ? C37 R28 1101 A 1 HETATM 29 C C39 R28 . . . C 2 0.171 -48.968 18.908 1 54.23 ? C39 R28 1101 A 1 HETATM 30 C C40 R28 . . . C 2 -0.761 -48.238 19.834 1 52.96 ? C40 R28 1101 A 1 HETATM 31 C C41 R28 . . . C 2 0.32 -50.442 19.348 1 54.21 ? C41 R28 1101 A 1 HETATM 32 C C43 R28 . . . C 2 1.839 -45.893 20.475 1 56.73 ? C43 R28 1101 A 1 HETATM 33 N N02 R28 . . . C 2 1.582 -45.412 21.733 1 59.44 ? N02 R28 1101 A 1 HETATM 34 N N11 R28 . . . C 2 5.149 -46.52 19.306 1 56.19 ? N11 R28 1101 A 1 HETATM 35 N N13 R28 . . . C 2 7.271 -46.642 18.244 1 59.74 ? N13 R28 1101 A 1 HETATM 36 N N17 R28 . . . C 2 8.241 -43.394 21.802 1 66.86 ? N17 R28 1101 A 1 HETATM 37 N N23 R28 . . . C 2 10.973 -44.603 21.993 1 81.18 ? N23 R28 1101 A 1 HETATM 38 N N27 R28 . . . C 2 12.157 -42.202 22.457 1 94.74 ? N27 R28 1101 A 1 HETATM 39 N N34 R28 . . . C 2 5.392 -47.355 17.125 1 55.91 ? N34 R28 1101 A 1 HETATM 40 O O21 R28 . . . C 2 6.167 -42.541 20.993 1 61.05 ? O21 R28 1101 A 1 HETATM 41 O O32 R28 . . . C 2 9.668 -47.681 18.447 1 66.9 ? O32 R28 1101 A 1 HETATM 42 O O38 R28 . . . C 2 1.433 -48.327 19.013 1 54.55 ? O38 R28 1101 A 1 HETATM 43 O O42 R28 . . . C 2 1.145 -47.12 16.975 1 57.8 ? O42 R28 1101 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 10 _model_server_stats.query_time_ms 238 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 43 #