data_7T4J # _model_server_result.job_id kVh-GHfDk1FRtEMHdxr4Kg _model_server_result.datetime_utc '2024-12-01 15:01:05' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t4j # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1102}' # _entry.id 7T4J # _exptl.entry_id 7T4J _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 192.124 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'CITRIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T4J _cell.length_a 58.121 _cell.length_b 85.531 _cell.length_c 127.854 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T4J _symmetry.cell_setting ? _symmetry.Int_Tables_number 18 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 2 21 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 106 A CYS 800 1_555 C C20 R28 . A R28 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.767 ? covale ? covale2 B SG CYS 106 B CYS 800 1_555 E C20 R28 . B R28 1101 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.784 ? # _chem_comp.formula 'C6 H8 O7' _chem_comp.formula_weight 192.124 _chem_comp.id CIT _chem_comp.mon_nstd_flag . _chem_comp.name 'CITRIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 CIT doub 70 n n C1 O2 CIT sing 71 n n C1 C2 CIT sing 72 n n O2 HO2 CIT sing 73 n n C2 C3 CIT sing 74 n n C2 H21 CIT sing 75 n n C2 H22 CIT sing 76 n n C3 O7 CIT sing 77 n n C3 C4 CIT sing 78 n n C3 C6 CIT sing 79 n n O7 HO7 CIT sing 80 n n C4 C5 CIT sing 81 n n C4 H41 CIT sing 82 n n C4 H42 CIT sing 83 n n C5 O3 CIT doub 84 n n C5 O4 CIT sing 85 n n O4 HO4 CIT sing 86 n n C6 O5 CIT doub 87 n n C6 O6 CIT sing 88 n n O6 HO6 CIT sing 89 n n # _atom_sites.entry_id 7T4J _atom_sites.fract_transf_matrix[1][1] 0.017205 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011692 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007821 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R28 A 1 1101 2500 R28 LIG . D 3 EDO A 1 1102 2601 EDO EDO . E 2 R28 B 1 1101 2500 R28 LIG . F 4 CIT B 1 1102 2601 CIT CIT . G 4 CIT B 1 1103 2701 CIT CIT . H 5 HOH A 1 1201 71 HOH HOH . H 5 HOH A 2 1202 42 HOH HOH . H 5 HOH A 3 1203 1 HOH HOH . H 5 HOH A 4 1204 73 HOH HOH . H 5 HOH A 5 1205 5 HOH HOH . H 5 HOH A 6 1206 107 HOH HOH . H 5 HOH A 7 1207 61 HOH HOH . H 5 HOH A 8 1208 68 HOH HOH . H 5 HOH A 9 1209 58 HOH HOH . H 5 HOH A 10 1210 77 HOH HOH . H 5 HOH A 11 1211 36 HOH HOH . H 5 HOH A 12 1212 76 HOH HOH . H 5 HOH A 13 1213 78 HOH HOH . H 5 HOH A 14 1214 82 HOH HOH . H 5 HOH A 15 1215 46 HOH HOH . H 5 HOH A 16 1216 17 HOH HOH . H 5 HOH A 17 1217 39 HOH HOH . H 5 HOH A 18 1218 66 HOH HOH . H 5 HOH A 19 1219 35 HOH HOH . H 5 HOH A 20 1220 59 HOH HOH . H 5 HOH A 21 1221 60 HOH HOH . H 5 HOH A 22 1222 32 HOH HOH . H 5 HOH A 23 1223 25 HOH HOH . H 5 HOH A 24 1224 74 HOH HOH . H 5 HOH A 25 1225 72 HOH HOH . H 5 HOH A 26 1226 3 HOH HOH . H 5 HOH A 27 1227 101 HOH HOH . H 5 HOH A 28 1228 69 HOH HOH . H 5 HOH A 29 1229 81 HOH HOH . H 5 HOH A 30 1230 19 HOH HOH . H 5 HOH A 31 1231 84 HOH HOH . H 5 HOH A 32 1232 38 HOH HOH . H 5 HOH A 33 1233 43 HOH HOH . H 5 HOH A 34 1234 20 HOH HOH . H 5 HOH A 35 1235 85 HOH HOH . H 5 HOH A 36 1236 87 HOH HOH . H 5 HOH A 37 1237 70 HOH HOH . H 5 HOH A 38 1238 109 HOH HOH . H 5 HOH A 39 1239 12 HOH HOH . H 5 HOH A 40 1240 29 HOH HOH . H 5 HOH A 41 1241 26 HOH HOH . H 5 HOH A 42 1242 18 HOH HOH . H 5 HOH A 43 1243 83 HOH HOH . H 5 HOH A 44 1244 31 HOH HOH . H 5 HOH A 45 1245 80 HOH HOH . H 5 HOH A 46 1246 62 HOH HOH . H 5 HOH A 47 1247 67 HOH HOH . H 5 HOH A 48 1248 75 HOH HOH . H 5 HOH A 49 1249 79 HOH HOH . H 5 HOH A 50 1250 86 HOH HOH . I 5 HOH B 1 1201 102 HOH HOH . I 5 HOH B 2 1202 52 HOH HOH . I 5 HOH B 3 1203 104 HOH HOH . I 5 HOH B 4 1204 105 HOH HOH . I 5 HOH B 5 1205 44 HOH HOH . I 5 HOH B 6 1206 106 HOH HOH . I 5 HOH B 7 1207 40 HOH HOH . I 5 HOH B 8 1208 92 HOH HOH . I 5 HOH B 9 1209 110 HOH HOH . I 5 HOH B 10 1210 50 HOH HOH . I 5 HOH B 11 1211 54 HOH HOH . I 5 HOH B 12 1212 90 HOH HOH . I 5 HOH B 13 1213 2 HOH HOH . I 5 HOH B 14 1214 108 HOH HOH . I 5 HOH B 15 1215 53 HOH HOH . I 5 HOH B 16 1216 51 HOH HOH . I 5 HOH B 17 1217 37 HOH HOH . I 5 HOH B 18 1218 57 HOH HOH . I 5 HOH B 19 1219 47 HOH HOH . I 5 HOH B 20 1220 89 HOH HOH . I 5 HOH B 21 1221 93 HOH HOH . I 5 HOH B 22 1222 103 HOH HOH . I 5 HOH B 23 1223 65 HOH HOH . I 5 HOH B 24 1224 4 HOH HOH . I 5 HOH B 25 1225 23 HOH HOH . I 5 HOH B 26 1226 64 HOH HOH . I 5 HOH B 27 1227 97 HOH HOH . I 5 HOH B 28 1228 55 HOH HOH . I 5 HOH B 29 1229 63 HOH HOH . I 5 HOH B 30 1230 48 HOH HOH . I 5 HOH B 31 1231 95 HOH HOH . I 5 HOH B 32 1232 24 HOH HOH . I 5 HOH B 33 1233 45 HOH HOH . I 5 HOH B 34 1234 100 HOH HOH . I 5 HOH B 35 1235 96 HOH HOH . I 5 HOH B 36 1236 91 HOH HOH . I 5 HOH B 37 1237 14 HOH HOH . I 5 HOH B 38 1238 15 HOH HOH . I 5 HOH B 39 1239 41 HOH HOH . I 5 HOH B 40 1240 94 HOH HOH . I 5 HOH B 41 1241 49 HOH HOH . I 5 HOH B 42 1242 99 HOH HOH . I 5 HOH B 43 1243 88 HOH HOH . I 5 HOH B 44 1244 98 HOH HOH . I 5 HOH B 45 1245 56 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 CIT . . . F 4 23.124 -29.263 60.091 1 116.17 ? C1 CIT 1102 B 1 HETATM 2 O O1 CIT . . . F 4 22.945 -28.417 59.196 1 120.66 ? O1 CIT 1102 B 1 HETATM 3 O O2 CIT . . . F 4 22.199 -29.783 60.743 1 116.4 ? O2 CIT 1102 B 1 HETATM 4 C C2 CIT . . . F 4 24.55 -29.695 60.394 1 117.69 ? C2 CIT 1102 B 1 HETATM 5 C C3 CIT . . . F 4 25.447 -28.644 61.061 1 120.5 ? C3 CIT 1102 B 1 HETATM 6 O O7 CIT . . . F 4 24.72 -27.973 62.074 1 127.84 ? O7 CIT 1102 B 1 HETATM 7 C C4 CIT . . . F 4 26.678 -29.321 61.68 1 119.76 ? C4 CIT 1102 B 1 HETATM 8 C C5 CIT . . . F 4 26.435 -30.371 62.752 1 115.3 ? C5 CIT 1102 B 1 HETATM 9 O O3 CIT . . . F 4 25.294 -30.853 62.867 1 104.14 ? O3 CIT 1102 B 1 HETATM 10 O O4 CIT . . . F 4 27.402 -30.708 63.466 1 116.21 ? O4 CIT 1102 B 1 HETATM 11 C C6 CIT . . . F 4 25.924 -27.636 59.985 1 125.2 ? C6 CIT 1102 B 1 HETATM 12 O O5 CIT . . . F 4 27.058 -27.814 59.497 1 126.19 ? O5 CIT 1102 B 1 HETATM 13 O O6 CIT . . . F 4 25.141 -26.724 59.669 1 143.96 ? O6 CIT 1102 B 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 51 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 443 _model_server_stats.encode_time_ms 9 _model_server_stats.element_count 13 #