data_7T5K # _model_server_result.job_id hDse3iS1dbPtyqIRflSlpQ _model_server_result.datetime_utc '2025-01-11 19:55:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 7t5k # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":403}' # _entry.id 7T5K # _exptl.entry_id 7T5K _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 156.096 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'OROTIC ACID' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 7T5K _cell.length_a 104.046 _cell.length_b 169.328 _cell.length_c 129.97 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 7T5K _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall 'C 2c 2' _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # _chem_comp.formula 'C5 H4 N2 O4' _chem_comp.formula_weight 156.096 _chem_comp.id ORO _chem_comp.mon_nstd_flag . _chem_comp.name 'OROTIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 C2 ORO sing 332 n y N1 C6 ORO sing 333 n y N1 HN1 ORO sing 334 n n C2 O2 ORO doub 335 n n C2 N3 ORO sing 336 n y N3 C4 ORO sing 337 n y N3 HN3 ORO sing 338 n n C4 O4 ORO doub 339 n n C4 C5 ORO sing 340 n y C5 C6 ORO doub 341 n y C5 H5 ORO sing 342 n n C6 C7 ORO sing 343 n n C7 O71 ORO doub 344 n n C7 O72 ORO sing 345 n n O72 HO7 ORO sing 346 n n # _atom_sites.entry_id 7T5K _atom_sites.fract_transf_matrix[1][1] 0.009611 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.005906 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007694 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FMN A 1 401 401 FMN FMN . D 3 HQO A 1 402 501 HQO HQO . E 4 ORO A 1 403 502 ORO ORO . F 3 HQO B 1 501 501 HQO HQO . G 2 FMN B 1 502 502 FMN FMN . H 4 ORO B 1 503 503 ORO ORO . I 5 HOH A 1 501 135 HOH HOH . I 5 HOH A 2 502 6 HOH HOH . I 5 HOH A 3 503 100 HOH HOH . I 5 HOH A 4 504 52 HOH HOH . I 5 HOH A 5 505 129 HOH HOH . I 5 HOH A 6 506 40 HOH HOH . I 5 HOH A 7 507 39 HOH HOH . I 5 HOH A 8 508 102 HOH HOH . I 5 HOH A 9 509 64 HOH HOH . I 5 HOH A 10 510 5 HOH HOH . I 5 HOH A 11 511 77 HOH HOH . I 5 HOH A 12 512 107 HOH HOH . I 5 HOH A 13 513 47 HOH HOH . I 5 HOH A 14 514 8 HOH HOH . I 5 HOH A 15 515 42 HOH HOH . I 5 HOH A 16 516 12 HOH HOH . I 5 HOH A 17 517 44 HOH HOH . I 5 HOH A 18 518 17 HOH HOH . I 5 HOH A 19 519 35 HOH HOH . I 5 HOH A 20 520 86 HOH HOH . I 5 HOH A 21 521 31 HOH HOH . I 5 HOH A 22 522 22 HOH HOH . I 5 HOH A 23 523 15 HOH HOH . I 5 HOH A 24 524 59 HOH HOH . I 5 HOH A 25 525 27 HOH HOH . I 5 HOH A 26 526 80 HOH HOH . I 5 HOH A 27 527 1 HOH HOH . I 5 HOH A 28 528 131 HOH HOH . I 5 HOH A 29 529 10 HOH HOH . I 5 HOH A 30 530 75 HOH HOH . I 5 HOH A 31 531 110 HOH HOH . I 5 HOH A 32 532 63 HOH HOH . I 5 HOH A 33 533 37 HOH HOH . I 5 HOH A 34 534 58 HOH HOH . I 5 HOH A 35 535 13 HOH HOH . I 5 HOH A 36 536 112 HOH HOH . I 5 HOH A 37 537 62 HOH HOH . I 5 HOH A 38 538 18 HOH HOH . I 5 HOH A 39 539 60 HOH HOH . I 5 HOH A 40 540 41 HOH HOH . I 5 HOH A 41 541 19 HOH HOH . I 5 HOH A 42 542 116 HOH HOH . I 5 HOH A 43 543 99 HOH HOH . I 5 HOH A 44 544 93 HOH HOH . I 5 HOH A 45 545 132 HOH HOH . I 5 HOH A 46 546 56 HOH HOH . I 5 HOH A 47 547 89 HOH HOH . I 5 HOH A 48 548 54 HOH HOH . I 5 HOH A 49 549 49 HOH HOH . I 5 HOH A 50 550 29 HOH HOH . I 5 HOH A 51 551 53 HOH HOH . I 5 HOH A 52 552 84 HOH HOH . I 5 HOH A 53 553 117 HOH HOH . I 5 HOH A 54 554 36 HOH HOH . I 5 HOH A 55 555 28 HOH HOH . I 5 HOH A 56 556 76 HOH HOH . I 5 HOH A 57 557 123 HOH HOH . I 5 HOH A 58 558 91 HOH HOH . I 5 HOH A 59 559 72 HOH HOH . I 5 HOH A 60 560 96 HOH HOH . I 5 HOH A 61 561 124 HOH HOH . I 5 HOH A 62 562 79 HOH HOH . I 5 HOH A 63 563 133 HOH HOH . I 5 HOH A 64 564 134 HOH HOH . I 5 HOH A 65 565 106 HOH HOH . I 5 HOH A 66 566 90 HOH HOH . I 5 HOH A 67 567 103 HOH HOH . I 5 HOH A 68 568 108 HOH HOH . I 5 HOH A 69 569 120 HOH HOH . I 5 HOH A 70 570 98 HOH HOH . I 5 HOH A 71 571 74 HOH HOH . J 5 HOH B 1 601 16 HOH HOH . J 5 HOH B 2 602 3 HOH HOH . J 5 HOH B 3 603 87 HOH HOH . J 5 HOH B 4 604 7 HOH HOH . J 5 HOH B 5 605 88 HOH HOH . J 5 HOH B 6 606 46 HOH HOH . J 5 HOH B 7 607 34 HOH HOH . J 5 HOH B 8 608 104 HOH HOH . J 5 HOH B 9 609 25 HOH HOH . J 5 HOH B 10 610 4 HOH HOH . J 5 HOH B 11 611 2 HOH HOH . J 5 HOH B 12 612 51 HOH HOH . J 5 HOH B 13 613 125 HOH HOH . J 5 HOH B 14 614 32 HOH HOH . J 5 HOH B 15 615 11 HOH HOH . J 5 HOH B 16 616 65 HOH HOH . J 5 HOH B 17 617 24 HOH HOH . J 5 HOH B 18 618 20 HOH HOH . J 5 HOH B 19 619 68 HOH HOH . J 5 HOH B 20 620 9 HOH HOH . J 5 HOH B 21 621 128 HOH HOH . J 5 HOH B 22 622 121 HOH HOH . J 5 HOH B 23 623 118 HOH HOH . J 5 HOH B 24 624 48 HOH HOH . J 5 HOH B 25 625 71 HOH HOH . J 5 HOH B 26 626 78 HOH HOH . J 5 HOH B 27 627 14 HOH HOH . J 5 HOH B 28 628 43 HOH HOH . J 5 HOH B 29 629 126 HOH HOH . J 5 HOH B 30 630 81 HOH HOH . J 5 HOH B 31 631 21 HOH HOH . J 5 HOH B 32 632 119 HOH HOH . J 5 HOH B 33 633 97 HOH HOH . J 5 HOH B 34 634 83 HOH HOH . J 5 HOH B 35 635 82 HOH HOH . J 5 HOH B 36 636 30 HOH HOH . J 5 HOH B 37 637 50 HOH HOH . J 5 HOH B 38 638 67 HOH HOH . J 5 HOH B 39 639 23 HOH HOH . J 5 HOH B 40 640 26 HOH HOH . J 5 HOH B 41 641 55 HOH HOH . J 5 HOH B 42 642 73 HOH HOH . J 5 HOH B 43 643 122 HOH HOH . J 5 HOH B 44 644 45 HOH HOH . J 5 HOH B 45 645 33 HOH HOH . J 5 HOH B 46 646 115 HOH HOH . J 5 HOH B 47 647 111 HOH HOH . J 5 HOH B 48 648 70 HOH HOH . J 5 HOH B 49 649 114 HOH HOH . J 5 HOH B 50 650 66 HOH HOH . J 5 HOH B 51 651 105 HOH HOH . J 5 HOH B 52 652 130 HOH HOH . J 5 HOH B 53 653 101 HOH HOH . J 5 HOH B 54 654 69 HOH HOH . J 5 HOH B 55 655 92 HOH HOH . J 5 HOH B 56 656 109 HOH HOH . J 5 HOH B 57 657 95 HOH HOH . J 5 HOH B 58 658 94 HOH HOH . J 5 HOH B 59 659 113 HOH HOH . J 5 HOH B 60 660 127 HOH HOH . J 5 HOH B 61 661 57 HOH HOH . J 5 HOH B 62 662 85 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 ORO . . . E 4 14.171 30.049 1.88 1 73.8 ? N1 ORO 403 A 1 HETATM 2 C C2 ORO . . . E 4 13.068 29.516 1.259 1 75.53 ? C2 ORO 403 A 1 HETATM 3 O O2 ORO . . . E 4 11.922 29.781 1.603 1 71.65 ? O2 ORO 403 A 1 HETATM 4 N N3 ORO . . . E 4 13.33 28.656 0.222 1 73.77 ? N3 ORO 403 A 1 HETATM 5 C C4 ORO . . . E 4 14.568 28.287 -0.242 1 68.98 ? C4 ORO 403 A 1 HETATM 6 O O4 ORO . . . E 4 14.65 27.503 -1.191 1 80.98 ? O4 ORO 403 A 1 HETATM 7 C C5 ORO . . . E 4 15.676 28.881 0.451 1 70.35 ? C5 ORO 403 A 1 HETATM 8 C C6 ORO . . . E 4 15.441 29.745 1.496 1 73.29 ? C6 ORO 403 A 1 HETATM 9 C C7 ORO . . . E 4 16.532 30.411 2.267 1 65.08 ? C7 ORO 403 A 1 HETATM 10 O O71 ORO . . . E 4 16.488 31.62 2.346 1 64.44 ? O71 ORO 403 A 1 HETATM 11 O O72 ORO . . . E 4 17.391 29.694 2.736 1 59.13 ? O72 ORO 403 A 1 # _model_server_stats.io_time_ms 57 _model_server_stats.parse_time_ms 22 _model_server_stats.create_model_time_ms 16 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 11 #